FFCP PHASE1:Hg19::chr10:28033565..28033575,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C199|description=CAGE_peak_at_chr10:28033565..28033575,-|id=chr10:28033565..28033575,-|ontology_enrichment_celltype=CL:0002556!1.52e-13!6;CL:0000057!1.44e-12!75;CL:0002552!3.36e-11!5;CL:0002622!1.75e-10!3;CL:0000055!4.17e-07!180|ontology_enrichment_celltype_v019=CL:0002552;1.44e-23;5!CL:0000135;1.14e-10;3!CL:0000388;1.14e-10;3!CL:0000243;1.02e-07;15!CL:0000125;1.02e-07;15!CL:0000095;5.34e-07;17|ontology_enrichment_celltype_v019_2=CL:0002552,1.61e-23,5;CL:0000135,1.09e-10,3;CL:0000388,1.09e-10,3;CL:0000243,1.02e-07,15;CL:0000125,1.02e-07,15;CL:0000030,1.02e-07,15;CL:0000339,1.02e-07,15;CL:0000095,5.34e-07,17;CL:0000123,5.34e-07,17|ontology_enrichment_development_v019=UBERON:0003099;3.64e-29;1!UBERON:0003852;3.64e-29;1!UBERON:0006238;2.07e-11;10!UBERON:0005062;2.52e-08;4!UBERON:0007284;2.52e-08;4!CL:0000339;1.02e-07;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:6193;1.78e-29;1!DOID:3350;1.78e-15;2!DOID:3093;1.53e-10;11|ontology_enrichment_disease_v019_2=DOID:6193,1.33e-29,1;DOID:3350,1.54e-15,2;DOID:3093,1.53e-10,11|ontology_enrichment_uberon=UBERON:0003102!4.51e-15!95;UBERON:0001758!1.52e-13!6;UBERON:0003672!1.52e-13!6;UBERON:0003129!2.50e-10!11;UBERON:0000165!9.34e-10!28;UBERON:0000930!9.34e-10!28;UBERON:0000161!6.74e-09!35;UBERON:0000075!1.26e-08!13;UBERON:0005944!1.26e-08!13;UBERON:0004288!1.26e-08!13;UBERON:0003089!1.26e-08!13;UBERON:0000162!1.21e-07!14;UBERON:0001353!1.21e-07!14;UBERON:0000163!1.21e-07!14;UBERON:0006866!1.21e-07!14;UBERON:0000164!1.21e-07!14;UBERON:0000931!1.21e-07!14;UBERON:0001870!2.38e-07!2;UBERON:0001444!3.51e-07!48;UBERON:0002367!4.12e-07!11;UBERON:0010147!4.12e-07!11;UBERON:0009846!4.12e-07!11;UBERON:0003353!4.12e-07!11;UBERON:0004902!4.12e-07!11;UBERON:0003820!4.12e-07!11;UBERON:0009847!4.12e-07!11;UBERON:0004122!4.35e-07!15;UBERON:0000033!5.47e-07!123;UBERON:0001828!5.52e-07!8|ontology_enrichment_uberon_v019=UBERON:0005705;3.64e-29;1!UBERON:0008193;3.64e-29;1!UBERON:0010912;3.64e-29;1!UBERON:0002514;3.64e-29;1!UBERON:0003457;3.64e-29;1!UBERON:0008907;3.64e-29;1!UBERON:0008001;3.64e-29;1!UBERON:0007213;3.64e-29;1!UBERON:0009891;3.64e-29;1!UBERON:0007914;3.64e-29;1!UBERON:0007375;3.64e-29;1!UBERON:0003323;3.64e-29;1!UBERON:0010258;3.64e-29;1!UBERON:0005253;3.64e-29;1!UBERON:0007842;3.64e-29;1!UBERON:0002397;3.64e-29;1!UBERON:0003113;3.64e-29;1!UBERON:0003277;3.64e-29;1!UBERON:0001709;3.64e-29;1!UBERON:0002244;3.64e-29;1!UBERON:0005620;3.64e-29;1!UBERON:0010364;3.64e-29;1!UBERON:0004288;3.64e-29;1!UBERON:0004089;2.55e-15;2!UBERON:0001828;3.79e-15;8!UBERON:0007846;1.14e-10;3!UBERON:0000043;1.14e-10;3!UBERON:0007845;1.14e-10;3!UBERON:0003729;1.04e-09;13!UBERON:0001708;2.52e-08;4!UBERON:0008895;2.52e-08;4!UBERON:0000161;6.19e-07;19!UBERON:0000166;6.19e-07;19!UBERON:0011159;6.58e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005705,4.20e-29,1;UBERON:0008193,4.20e-29,1;UBERON:0010912,4.20e-29,1;UBERON:0002514,4.20e-29,1;UBERON:0003457,4.20e-29,1;UBERON:0008907,4.20e-29,1;UBERON:0008001,4.20e-29,1;UBERON:0007213,4.20e-29,1;UBERON:0009891,4.20e-29,1;UBERON:0007914,4.20e-29,1;UBERON:0009292,4.20e-29,1;UBERON:0003099,4.20e-29,1;UBERON:0007375,4.20e-29,1;UBERON:0003323,4.20e-29,1;UBERON:0010258,4.20e-29,1;UBERON:0007842,4.20e-29,1;UBERON:0009494,4.20e-29,1;UBERON:0010042,4.20e-29,1;UBERON:0010045,4.20e-29,1;UBERON:0010259,4.20e-29,1;UBERON:0010359,4.20e-29,1;UBERON:0009526,4.20e-29,1;UBERON:0002397,4.20e-29,1;UBERON:0003113,4.20e-29,1;UBERON:0003277,4.20e-29,1;UBERON:0001709,4.20e-29,1;UBERON:0004066,4.20e-29,1;UBERON:0002244,4.20e-29,1;UBERON:0005620,4.20e-29,1;UBERON:0004362,4.20e-29,1;UBERON:0010364,4.20e-29,1;UBERON:0010046,4.20e-29,1;UBERON:0005868,4.20e-29,1;UBERON:0007238,4.20e-29,1;UBERON:0004288,4.20e-29,1;UBERON:0004068,4.20e-29,1;UBERON:0010334,4.20e-29,1;UBERON:0003852,4.20e-29,1;UBERON:0010253,4.20e-29,1;UBERON:0005253,2.74e-15,2;UBERON:0004089,2.74e-15,2;UBERON:0001828,4.07e-15,8;UBERON:0000166,3.08e-12,22;UBERON:0007846,1.09e-10,3;UBERON:0000043,1.09e-10,3;UBERON:0007845,1.09e-10,3;UBERON:0003729,1.08e-09,13;UBERON:0000165,1.87e-09,29;UBERON:0000930,1.87e-09,29;UBERON:0001708,2.61e-08,4;UBERON:0008895,2.61e-08,4;UBERON:0000161,9.60e-08,36;UBERON:0011159,6.77e-07,5|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0.309977343527296,2.37600571456411,2.22540236350701,0,0,0,0.125118519871964,0.554128230968366,0.438977620880838,0.30648779579902,0.75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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C199 | |||
|description=CAGE_peak_at_chr10:28033565..28033575,- | |||
|id=chr10:28033565..28033575,- | |||
|ontology_enrichment_celltype=CL:0002556!1.52e-13!6;CL:0000057!1.44e-12!75;CL:0002552!3.36e-11!5;CL:0002622!1.75e-10!3;CL:0000055!4.17e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002552;1.44e-23;5!CL:0000135;1.14e-10;3!CL:0000388;1.14e-10;3!CL:0000243;1.02e-07;15!CL:0000125;1.02e-07;15!CL:0000095;5.34e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.61e-23,5;CL:0000135,1.09e-10,3;CL:0000388,1.09e-10,3;CL:0000243,1.02e-07,15;CL:0000125,1.02e-07,15;CL:0000030,1.02e-07,15;CL:0000339,1.02e-07,15;CL:0000095,5.34e-07,17;CL:0000123,5.34e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003099;3.64e-29;1!UBERON:0003852;3.64e-29;1!UBERON:0006238;2.07e-11;10!UBERON:0005062;2.52e-08;4!UBERON:0007284;2.52e-08;4!CL:0000339;1.02e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.78e-29;1!DOID:3350;1.78e-15;2!DOID:3093;1.53e-10;11 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.33e-29,1;DOID:3350,1.54e-15,2;DOID:3093,1.53e-10,11 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.51e-15!95;UBERON:0001758!1.52e-13!6;UBERON:0003672!1.52e-13!6;UBERON:0003129!2.50e-10!11;UBERON:0000165!9.34e-10!28;UBERON:0000930!9.34e-10!28;UBERON:0000161!6.74e-09!35;UBERON:0000075!1.26e-08!13;UBERON:0005944!1.26e-08!13;UBERON:0004288!1.26e-08!13;UBERON:0003089!1.26e-08!13;UBERON:0000162!1.21e-07!14;UBERON:0001353!1.21e-07!14;UBERON:0000163!1.21e-07!14;UBERON:0006866!1.21e-07!14;UBERON:0000164!1.21e-07!14;UBERON:0000931!1.21e-07!14;UBERON:0001870!2.38e-07!2;UBERON:0001444!3.51e-07!48;UBERON:0002367!4.12e-07!11;UBERON:0010147!4.12e-07!11;UBERON:0009846!4.12e-07!11;UBERON:0003353!4.12e-07!11;UBERON:0004902!4.12e-07!11;UBERON:0003820!4.12e-07!11;UBERON:0009847!4.12e-07!11;UBERON:0004122!4.35e-07!15;UBERON:0000033!5.47e-07!123;UBERON:0001828!5.52e-07!8 | |||
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|short_description=p@chr10:28033565..28033575,- | |||
}} |
Revision as of 13:01, 10 September 2013
Short description: | p@chr10:28033565..28033575, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:28033565..28033575, - |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.61e-23 | 5 |
fibrocyte | 1.09e-10 | 3 |
tendon cell | 1.09e-10 | 3 |
glial cell (sensu Vertebrata) | 1.02e-07 | 15 |
glial cell | 1.02e-07 | 15 |
glioblast | 1.02e-07 | 15 |
glioblast (sensu Vertebrata) | 1.02e-07 | 15 |
neuron associated cell | 5.34e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.34e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.33e-29 | 1 |
mesenchymal cell neoplasm | 1.54e-15 | 2 |
nervous system cancer | 1.53e-10 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.