FFCP PHASE1:Hg19::chr10:4720333..4720350,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000430998_5end|coexpression_cluster_id=C1584|description=CAGE_peak_3_at_ENST00000430998_5end|id=chr10:4720333..4720350,-|ontology_enrichment_celltype=CL:0002139!2.67e-25!24;CL:0000115!1.09e-20!35;CL:0000071!3.44e-19!18;CL:0002546!3.44e-19!18;CL:0002078!9.25e-17!44;CL:0000066!3.53e-16!254;CL:0000220!3.74e-13!246;CL:0002321!7.72e-13!248;CL:1000413!7.25e-12!9;CL:0000213!1.68e-11!57;CL:0000215!1.68e-11!57;CL:0000076!2.81e-11!62;CL:0000223!2.25e-09!59;CL:0002544!1.53e-08!6;CL:0002076!1.61e-08!43;CL:0005020!1.17e-07!6;CL:0002138!1.17e-07!6;CL:0005022!1.17e-07!6;CL:0000063!2.44e-07!578;CL:0002371!3.17e-07!591;CL:0000548!6.64e-07!679;CL:0000004!6.64e-07!679;CL:0000255!6.64e-07!679;CL:0000222!9.34e-07!119|ontology_enrichment_celltype_v019=CL:0002139;8.06e-58;24!CL:0000071;1.30e-46;18!CL:0000115;6.89e-39;36!CL:1000413;2.08e-27;9!CL:0002078;1.12e-23;45!CL:0002544;4.38e-19;6!CL:0000213;1.03e-17;58!CL:0000215;1.03e-17;58!CL:0002543;2.66e-13;6!CL:0002138;8.14e-13;6!CL:0000076;7.62e-11;63!CL:0002621;1.28e-10;3!CL:0002618;2.01e-10;3!CL:0002166;1.33e-09;3!CL:0002144;1.89e-09;3!CL:0002545;1.94e-07;2|ontology_enrichment_celltype_v019_2=CL:0002139,7.24e-58,24;CL:0000115,2.90e-47,36;CL:0000071,8.46e-47,18;CL:0002546,8.46e-47,18;CL:0002078,2.28e-36,45;CL:0000213,7.18e-29,58;CL:0000215,7.18e-29,58;CL:1000413,2.02e-27,9;CL:0000066,1.14e-19,253;CL:0002544,4.56e-19,6;CL:0000076,1.34e-17,63;CL:0002543,2.42e-13,6;CL:0002321,5.32e-13,250;CL:0005020,1.07e-12,6;CL:0002138,1.07e-12,6;CL:0005022,1.07e-12,6;CL:0002621,1.27e-10,3;CL:0002618,1.90e-10,3;CL:0000222,3.07e-10,121;CL:0002166,8.16e-10,3;CL:0002144,1.39e-09,3;CL:0002545,1.95e-07,2|ontology_enrichment_development_v019=CL:0002546;1.30e-46;18!CL:0005022;8.14e-13;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!3.44e-19!18;UBERON:0004638!3.44e-19!18;UBERON:0004852!3.44e-19!18;UBERON:0000487!1.92e-18!22;UBERON:0006914!2.54e-15!25;UBERON:0000055!1.58e-13!69;UBERON:0003915!7.25e-12!9;UBERON:0004700!7.25e-12!9;UBERON:0001917!7.25e-12!9;UBERON:0002049!1.27e-11!79;UBERON:0007798!1.27e-11!79;UBERON:0001981!1.43e-10!60;UBERON:0007500!1.43e-10!60;UBERON:0004537!1.43e-10!60;UBERON:0006965!1.43e-10!60;UBERON:0003914!1.99e-10!118;UBERON:0004872!9.52e-10!84;UBERON:0000467!2.36e-09!625;UBERON:0000480!2.90e-09!626;UBERON:0001009!3.67e-09!113;UBERON:0000468!7.65e-09!659;UBERON:0004535!3.62e-08!110;UBERON:0000490!4.19e-08!138;UBERON:0004119!5.05e-07!169;UBERON:0000925!5.05e-07!169;UBERON:0006595!5.05e-07!169;UBERON:0001637!5.72e-07!42;UBERON:0003509!5.72e-07!42;UBERON:0004572!5.72e-07!42|ontology_enrichment_uberon_v019=UBERON:0004638;1.30e-46;18!UBERON:0001986;1.30e-46;18!UBERON:0004852;1.30e-46;18!UBERON:0000487;5.97e-42;22!UBERON:0006914;2.65e-36;25!UBERON:0003915;2.08e-27;9!UBERON:0004700;2.08e-27;9!UBERON:0001917;2.08e-27;9!UBERON:0000490;1.04e-26;33!UBERON:0000055;4.89e-11;65!UBERON:0001949;1.28e-10;3!UBERON:0001473;1.64e-09;8!UBERON:0004536;1.64e-09;8!UBERON:0006558;1.64e-09;8!UBERON:0010523;1.89e-09;3!UBERON:0001915;1.89e-09;3!UBERON:0001982;1.89e-09;3!UBERON:0007500;3.52e-09;56!UBERON:0001981;3.52e-09;56!UBERON:0004537;3.52e-09;56!UBERON:0001638;1.02e-08;9!UBERON:0003920;1.02e-08;9!UBERON:0004582;1.02e-08;9!UBERON:0002049;1.08e-07;75!UBERON:0007798;1.08e-07;75!UBERON:0002465;1.59e-07;10!UBERON:0005800;1.94e-07;2!UBERON:0001515;1.94e-07;2!UBERON:0003914;2.18e-07;74!UBERON:0001708;2.71e-07;4!UBERON:0008895;2.71e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.46e-47,18;UBERON:0001986,8.46e-47,18;UBERON:0004852,8.46e-47,18;UBERON:0000487,4.38e-42,22;UBERON:0006914,2.03e-36,25;UBERON:0003915,2.02e-27,9;UBERON:0004700,2.02e-27,9;UBERON:0001917,2.02e-27,9;UBERON:0000055,4.75e-18,68;UBERON:0002049,6.09e-15,78;UBERON:0007798,6.09e-15,78;UBERON:0007500,1.61e-12,59;UBERON:0001981,1.61e-12,59;UBERON:0004537,1.61e-12,59;UBERON:0006965,1.61e-12,59;UBERON:0001949,1.27e-10,3;UBERON:0003914,1.31e-10,117;UBERON:0004535,5.54e-10,109;UBERON:0004872,1.17e-09,83;UBERON:0010523,1.39e-09,3;UBERON:0001915,1.39e-09,3;UBERON:0001982,1.39e-09,3;UBERON:0001009,1.48e-09,112;UBERON:0001473,2.01e-09,8;UBERON:0004536,2.01e-09,8;UBERON:0006558,2.01e-09,8;UBERON:0001638,9.56e-09,9;UBERON:0003920,9.56e-09,9;UBERON:0004582,9.56e-09,9;UBERON:0000490,6.38e-08,148;UBERON:0004111,7.25e-08,240;UBERON:0002465,1.86e-07,10;UBERON:0001708,1.89e-07,4;UBERON:0008895,1.89e-07,4;UBERON:0005800,1.95e-07,2;UBERON:0001515,1.95e-07,2|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000430998_5end | |||
|coexpression_cluster_id=C1584 | |||
|description=CAGE_peak_3_at_ENST00000430998_5end | |||
|id=chr10:4720333..4720350,- | |||
|ontology_enrichment_celltype=CL:0002139!2.67e-25!24;CL:0000115!1.09e-20!35;CL:0000071!3.44e-19!18;CL:0002546!3.44e-19!18;CL:0002078!9.25e-17!44;CL:0000066!3.53e-16!254;CL:0000220!3.74e-13!246;CL:0002321!7.72e-13!248;CL:1000413!7.25e-12!9;CL:0000213!1.68e-11!57;CL:0000215!1.68e-11!57;CL:0000076!2.81e-11!62;CL:0000223!2.25e-09!59;CL:0002544!1.53e-08!6;CL:0002076!1.61e-08!43;CL:0005020!1.17e-07!6;CL:0002138!1.17e-07!6;CL:0005022!1.17e-07!6;CL:0000063!2.44e-07!578;CL:0002371!3.17e-07!591;CL:0000548!6.64e-07!679;CL:0000004!6.64e-07!679;CL:0000255!6.64e-07!679;CL:0000222!9.34e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.06e-58;24!CL:0000071;1.30e-46;18!CL:0000115;6.89e-39;36!CL:1000413;2.08e-27;9!CL:0002078;1.12e-23;45!CL:0002544;4.38e-19;6!CL:0000213;1.03e-17;58!CL:0000215;1.03e-17;58!CL:0002543;2.66e-13;6!CL:0002138;8.14e-13;6!CL:0000076;7.62e-11;63!CL:0002621;1.28e-10;3!CL:0002618;2.01e-10;3!CL:0002166;1.33e-09;3!CL:0002144;1.89e-09;3!CL:0002545;1.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.24e-58,24;CL:0000115,2.90e-47,36;CL:0000071,8.46e-47,18;CL:0002546,8.46e-47,18;CL:0002078,2.28e-36,45;CL:0000213,7.18e-29,58;CL:0000215,7.18e-29,58;CL:1000413,2.02e-27,9;CL:0000066,1.14e-19,253;CL:0002544,4.56e-19,6;CL:0000076,1.34e-17,63;CL:0002543,2.42e-13,6;CL:0002321,5.32e-13,250;CL:0005020,1.07e-12,6;CL:0002138,1.07e-12,6;CL:0005022,1.07e-12,6;CL:0002621,1.27e-10,3;CL:0002618,1.90e-10,3;CL:0000222,3.07e-10,121;CL:0002166,8.16e-10,3;CL:0002144,1.39e-09,3;CL:0002545,1.95e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.30e-46;18!CL:0005022;8.14e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.44e-19!18;UBERON:0004638!3.44e-19!18;UBERON:0004852!3.44e-19!18;UBERON:0000487!1.92e-18!22;UBERON:0006914!2.54e-15!25;UBERON:0000055!1.58e-13!69;UBERON:0003915!7.25e-12!9;UBERON:0004700!7.25e-12!9;UBERON:0001917!7.25e-12!9;UBERON:0002049!1.27e-11!79;UBERON:0007798!1.27e-11!79;UBERON:0001981!1.43e-10!60;UBERON:0007500!1.43e-10!60;UBERON:0004537!1.43e-10!60;UBERON:0006965!1.43e-10!60;UBERON:0003914!1.99e-10!118;UBERON:0004872!9.52e-10!84;UBERON:0000467!2.36e-09!625;UBERON:0000480!2.90e-09!626;UBERON:0001009!3.67e-09!113;UBERON:0000468!7.65e-09!659;UBERON:0004535!3.62e-08!110;UBERON:0000490!4.19e-08!138;UBERON:0004119!5.05e-07!169;UBERON:0000925!5.05e-07!169;UBERON:0006595!5.05e-07!169;UBERON:0001637!5.72e-07!42;UBERON:0003509!5.72e-07!42;UBERON:0004572!5.72e-07!42 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.46e-47,18;UBERON:0001986,8.46e-47,18;UBERON:0004852,8.46e-47,18;UBERON:0000487,4.38e-42,22;UBERON:0006914,2.03e-36,25;UBERON:0003915,2.02e-27,9;UBERON:0004700,2.02e-27,9;UBERON:0001917,2.02e-27,9;UBERON:0000055,4.75e-18,68;UBERON:0002049,6.09e-15,78;UBERON:0007798,6.09e-15,78;UBERON:0007500,1.61e-12,59;UBERON:0001981,1.61e-12,59;UBERON:0004537,1.61e-12,59;UBERON:0006965,1.61e-12,59;UBERON:0001949,1.27e-10,3;UBERON:0003914,1.31e-10,117;UBERON:0004535,5.54e-10,109;UBERON:0004872,1.17e-09,83;UBERON:0010523,1.39e-09,3;UBERON:0001915,1.39e-09,3;UBERON:0001982,1.39e-09,3;UBERON:0001009,1.48e-09,112;UBERON:0001473,2.01e-09,8;UBERON:0004536,2.01e-09,8;UBERON:0006558,2.01e-09,8;UBERON:0001638,9.56e-09,9;UBERON:0003920,9.56e-09,9;UBERON:0004582,9.56e-09,9;UBERON:0000490,6.38e-08,148;UBERON:0004111,7.25e-08,240;UBERON:0002465,1.86e-07,10;UBERON:0001708,1.89e-07,4;UBERON:0008895,1.89e-07,4;UBERON:0005800,1.95e-07,2;UBERON:0001515,1.95e-07,2 | |||
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| |||
|short_description=p3@ENST00000430998 | |||
}} |
Revision as of 13:30, 10 September 2013
Short description: | p3@ENST00000430998 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENST00000430998_5end |
Coexpression cluster: | C1584_Endothelial_prostate_Gingival_Prostate_lens_Urothelial_Mallassezderived |
Association with transcript: | 0bp_to_ENST00000430998_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.24e-58 | 24 |
endothelial cell | 2.90e-47 | 36 |
blood vessel endothelial cell | 8.46e-47 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.46e-47 | 18 |
meso-epithelial cell | 2.28e-36 | 45 |
lining cell | 7.18e-29 | 58 |
barrier cell | 7.18e-29 | 58 |
endothelial cell of artery | 2.02e-27 | 9 |
epithelial cell | 1.14e-19 | 253 |
aortic endothelial cell | 4.56e-19 | 6 |
squamous epithelial cell | 1.34e-17 | 63 |
vein endothelial cell | 2.42e-13 | 6 |
embryonic cell | 5.32e-13 | 250 |
lymphangioblast | 1.07e-12 | 6 |
endothelial cell of lymphatic vessel | 1.07e-12 | 6 |
vascular lymphangioblast | 1.07e-12 | 6 |
gingival epithelial cell | 1.27e-10 | 3 |
endothelial cell of umbilical vein | 1.90e-10 | 3 |
mesodermal cell | 3.07e-10 | 121 |
epithelial cell of Malassez | 8.16e-10 | 3 |
capillary endothelial cell | 1.39e-09 | 3 |
thoracic aorta endothelial cell | 1.95e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.