FFCP PHASE1:Hg19::chr1:247587426..247587440,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114548|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=16400|TSSclassifier=N|UniProt=Q96P20|association_with_transcript=-480bp_to_AF054176_5end|coexpression_cluster_id=C0|description=CAGE_peak_10_at_NLRP3_5end|id=chr1:247587426..247587440,+|ontology_enrichment_celltype=CL:0002057!4.35e-78!42;CL:0000860!1.36e-72!45;CL:0002194!2.56e-54!63;CL:0000576!2.56e-54!63;CL:0000040!2.56e-54!63;CL:0000559!2.56e-54!63;CL:0002009!1.55e-52!65;CL:0000839!1.61e-48!70;CL:0000766!2.13e-48!76;CL:0000557!8.80e-48!71;CL:0002087!6.05e-32!119;CL:0000763!1.71e-31!112;CL:0000049!1.71e-31!112;CL:0000738!7.96e-29!140;CL:0002031!5.76e-28!124;CL:0000037!1.40e-22!172;CL:0000566!1.40e-22!172;CL:0002032!8.78e-22!165;CL:0000837!8.78e-22!165;CL:0000988!4.47e-21!182;CL:0002393!9.57e-12!9;CL:0002397!9.57e-12!9;CL:0000134!3.64e-09!358;CL:0002320!6.87e-09!365;CL:0000219!8.75e-09!390;CL:0000048!9.62e-07!430|ontology_enrichment_celltype_v019=CL:0000860;7.20e-30;33!CL:0002057;7.20e-30;33!CL:0000473;1.03e-21;39!CL:0000234;1.03e-21;39!CL:0000576;1.93e-18;48!CL:0002393;1.76e-15;6!CL:0002397;1.76e-15;6!CL:0000766;3.56e-11;69!CL:0002087;4.13e-10;104!CL:0000763;1.73e-08;100|ontology_enrichment_celltype_v019_2=CL:0000860,5.11e-42,42;CL:0002057,5.11e-42,42;CL:0000473,9.02e-37,48;CL:0000234,9.02e-37,48;CL:0002194,2.04e-29,59;CL:0000576,2.04e-29,59;CL:0000040,2.04e-29,59;CL:0000559,2.04e-29,59;CL:0002009,1.81e-28,61;CL:0000839,2.43e-26,66;CL:0000557,5.95e-26,67;CL:0000766,3.60e-24,72;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0002393,1.24e-10,9;CL:0002397,1.24e-10,9;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177|ontology_enrichment_development_v019=CL:0002057;1.13e-25;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.71e-42!80;UBERON:0001474!9.22e-39!86;UBERON:0002390!4.31e-38!102;UBERON:0003061!4.31e-38!102;UBERON:0002193!2.68e-34!112;UBERON:0004765!2.18e-32!101;UBERON:0001434!2.18e-32!101;UBERON:0002405!6.33e-28!115;UBERON:0002204!7.66e-18!167;UBERON:0003081!5.10e-17!216;UBERON:0002384!1.64e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-23,76;UBERON:0001474,3.01e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,9.53e-19,93;UBERON:0002390,8.57e-18,98;UBERON:0003061,8.57e-18,98;UBERON:0001434,1.94e-17,100;UBERON:0002193,3.81e-16,108;UBERON:0002204,2.16e-10,167;UBERON:0003081,1.68e-08,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,1.10799081706375,1.20326668482085,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0.575384784644301,0.512321413058201,0.945928919554341,3.10271112662957,0,0,0,0.545812300115692,0.224723484445085,7.65209730927256,0.962787081228281,7.67204550958849,0.329851300186716,0,0,3.77272010217159,0.56738522469114,2.4912889959823,0.502497330513487,0,0.434377689410233,1.21079900526674,2.20966581592539,0.949387162322653,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@NLRP3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=114548 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16400 | |||
|TSSclassifier=N | |||
|UniProt=Q96P20 | |||
|association_with_transcript=-480bp_to_AF054176_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_NLRP3_5end | |||
|id=chr1:247587426..247587440,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.35e-78!42;CL:0000860!1.36e-72!45;CL:0002194!2.56e-54!63;CL:0000576!2.56e-54!63;CL:0000040!2.56e-54!63;CL:0000559!2.56e-54!63;CL:0002009!1.55e-52!65;CL:0000839!1.61e-48!70;CL:0000766!2.13e-48!76;CL:0000557!8.80e-48!71;CL:0002087!6.05e-32!119;CL:0000763!1.71e-31!112;CL:0000049!1.71e-31!112;CL:0000738!7.96e-29!140;CL:0002031!5.76e-28!124;CL:0000037!1.40e-22!172;CL:0000566!1.40e-22!172;CL:0002032!8.78e-22!165;CL:0000837!8.78e-22!165;CL:0000988!4.47e-21!182;CL:0002393!9.57e-12!9;CL:0002397!9.57e-12!9;CL:0000134!3.64e-09!358;CL:0002320!6.87e-09!365;CL:0000219!8.75e-09!390;CL:0000048!9.62e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.20e-30;33!CL:0002057;7.20e-30;33!CL:0000473;1.03e-21;39!CL:0000234;1.03e-21;39!CL:0000576;1.93e-18;48!CL:0002393;1.76e-15;6!CL:0002397;1.76e-15;6!CL:0000766;3.56e-11;69!CL:0002087;4.13e-10;104!CL:0000763;1.73e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.11e-42,42;CL:0002057,5.11e-42,42;CL:0000473,9.02e-37,48;CL:0000234,9.02e-37,48;CL:0002194,2.04e-29,59;CL:0000576,2.04e-29,59;CL:0000040,2.04e-29,59;CL:0000559,2.04e-29,59;CL:0002009,1.81e-28,61;CL:0000839,2.43e-26,66;CL:0000557,5.95e-26,67;CL:0000766,3.60e-24,72;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0002393,1.24e-10,9;CL:0002397,1.24e-10,9;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.71e-42!80;UBERON:0001474!9.22e-39!86;UBERON:0002390!4.31e-38!102;UBERON:0003061!4.31e-38!102;UBERON:0002193!2.68e-34!112;UBERON:0004765!2.18e-32!101;UBERON:0001434!2.18e-32!101;UBERON:0002405!6.33e-28!115;UBERON:0002204!7.66e-18!167;UBERON:0003081!5.10e-17!216;UBERON:0002384!1.64e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-23,76;UBERON:0001474,3.01e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,9.53e-19,93;UBERON:0002390,8.57e-18,98;UBERON:0003061,8.57e-18,98;UBERON:0001434,1.94e-17,100;UBERON:0002193,3.81e-16,108;UBERON:0002204,2.16e-10,167;UBERON:0003081,1.68e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,1.10799081706375,1.20326668482085,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0.575384784644301,0.512321413058201,0.945928919554341,3.10271112662957,0,0,0,0.545812300115692,0.224723484445085,7.65209730927256,0.962787081228281,7.67204550958849,0.329851300186716,0,0,3.77272010217159,0.56738522469114,2.4912889959823,0.502497330513487,0,0.434377689410233,1.21079900526674,2.20966581592539,0.949387162322653,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@NLRP3 | |||
}} |
Revision as of 04:47, 12 September 2013
Short description: | p10@NLRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_NLRP3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -480bp_to_AF054176_5end |
EntrezGene: | NLRP3 |
HGNC: | 16400 |
UniProt: | Q96P20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.11e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.11e-42 | 42 |
defensive cell | 9.02e-37 | 48 |
phagocyte | 9.02e-37 | 48 |
monopoietic cell | 2.04e-29 | 59 |
monocyte | 2.04e-29 | 59 |
monoblast | 2.04e-29 | 59 |
promonocyte | 2.04e-29 | 59 |
macrophage dendritic cell progenitor | 1.81e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.43e-26 | 66 |
granulocyte monocyte progenitor cell | 5.95e-26 | 67 |
myeloid leukocyte | 3.60e-24 | 72 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
nongranular leukocyte | 3.68e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
leukocyte | 8.37e-13 | 136 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
intermediate monocyte | 1.24e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.24e-10 | 9 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.54e-23 | 76 |
bone element | 3.01e-21 | 82 |
skeletal element | 2.27e-19 | 90 |
immune system | 9.53e-19 | 93 |
hematopoietic system | 8.57e-18 | 98 |
blood island | 8.57e-18 | 98 |
skeletal system | 1.94e-17 | 100 |
hemolymphoid system | 3.81e-16 | 108 |
musculoskeletal system | 2.16e-10 | 167 |
lateral plate mesoderm | 1.68e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.