FFCP PHASE1:Hg19::chr1:237505632..237505636,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:237505632..237505636,+|id=chr1:237505632..237505636,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000746;1.96e-12;3!CL:0000737;1.17e-09;4!CL:0000333;6.78e-08;5|ontology_enrichment_celltype_v019_2=CL:0000746,1.85e-12,3;CL:0000513,1.85e-12,3;CL:0000737,1.12e-09,4|ontology_enrichment_development_v019=UBERON:0004140;5.97e-34;1!UBERON:0005062;7.07e-34;4!UBERON:0007284;7.07e-34;4!CL:0000513;1.96e-12;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;8.72e-07;6|ontology_enrichment_disease_v019_2=DOID:169,8.02e-07,6|ontology_enrichment_uberon=UBERON:0007023!4.54e-38!115;UBERON:0002780!4.28e-37!41;UBERON:0001890!4.28e-37!41;UBERON:0006240!4.28e-37!41;UBERON:0003080!4.55e-36!42;UBERON:0001049!1.49e-34!57;UBERON:0005068!1.49e-34!57;UBERON:0006241!1.49e-34!57;UBERON:0007135!1.49e-34!57;UBERON:0001869!1.79e-33!32;UBERON:0001893!3.14e-31!34;UBERON:0002020!3.19e-31!34;UBERON:0003528!3.19e-31!34;UBERON:0002616!1.21e-30!59;UBERON:0002791!3.33e-29!33;UBERON:0001017!5.35e-29!82;UBERON:0000955!5.94e-29!69;UBERON:0006238!5.94e-29!69;UBERON:0005743!2.85e-27!86;UBERON:0002346!1.76e-26!90;UBERON:0003075!3.80e-26!86;UBERON:0007284!3.80e-26!86;UBERON:0000073!8.02e-26!94;UBERON:0001016!8.02e-26!94;UBERON:0002619!7.72e-25!22;UBERON:0001950!8.77e-24!20;UBERON:0003056!6.87e-23!61;UBERON:0000956!1.58e-21!25;UBERON:0000203!1.58e-21!25;UBERON:0000200!3.31e-17!6;UBERON:0000924!2.75e-14!173;UBERON:0006601!2.75e-14!173;UBERON:0000033!3.22e-14!123;UBERON:0004121!8.51e-14!169;UBERON:0000153!3.31e-13!129;UBERON:0007811!3.31e-13!129;UBERON:0000369!1.65e-12!4;UBERON:0002435!1.65e-12!4;UBERON:0000204!1.65e-12!4;UBERON:0010082!1.65e-12!4;UBERON:0000025!6.33e-12!194;UBERON:0002420!2.87e-11!9;UBERON:0007245!2.87e-11!9;UBERON:0010009!2.87e-11!9;UBERON:0010011!2.87e-11!9;UBERON:0000454!2.87e-11!9;UBERON:0002308!3.03e-11!9;UBERON:0000125!3.03e-11!9;UBERON:0003978!1.37e-10!3;UBERON:0009751!1.37e-10!3;UBERON:0000946!1.37e-10!3;UBERON:0002523!1.37e-10!3;UBERON:0005983!1.37e-10!3;UBERON:0002165!1.37e-10!3;UBERON:0002062!1.37e-10!3;UBERON:0007280!1.37e-10!3;UBERON:0009663!1.60e-10!7;UBERON:0005383!2.18e-10!3;UBERON:0005382!2.18e-10!3;UBERON:0002771!1.39e-09!3;UBERON:0000477!1.95e-09!286;UBERON:0004111!2.98e-09!241;UBERON:0001871!5.33e-09!7;UBERON:0003296!1.20e-07!4;UBERON:0010133!1.20e-07!4;UBERON:0002133!1.46e-07!2;UBERON:0001873!2.18e-07!2;UBERON:0010122!2.18e-07!2;UBERON:0001905!2.87e-07!2;UBERON:0002757!2.87e-07!2;UBERON:0010134!2.87e-07!2;UBERON:0002784!2.87e-07!2;UBERON:0005408!2.87e-07!2;UBERON:0001899!2.87e-07!2;UBERON:0001894!3.34e-07!7;UBERON:0006222!3.34e-07!7;UBERON:0001870!6.64e-07!2|ontology_enrichment_uberon_v019=UBERON:0003978;9.77e-45;3!UBERON:0000946;9.77e-45;3!UBERON:0002146;2.18e-34;1!UBERON:0005623;2.18e-34;1!UBERON:0001874;5.97e-34;1!UBERON:0002134;5.97e-34;1!UBERON:0005208;5.97e-34;1!UBERON:0004145;5.97e-34;1!UBERON:0005946;5.97e-34;1!UBERON:0005965;5.97e-34;1!UBERON:0002078;5.97e-34;1!UBERON:0000948;1.51e-24;22!UBERON:0007100;1.09e-21;25!UBERON:0002081;9.86e-18;2!UBERON:0002133;9.86e-18;2!UBERON:0010313;3.04e-14;10!UBERON:0004151;2.74e-12;3!UBERON:0005383;2.74e-12;3!UBERON:0005382;2.74e-12;3!UBERON:0000369;1.50e-09;4!UBERON:0002435;1.50e-09;4!UBERON:0000204;1.50e-09;4!UBERON:0000013;6.78e-08;5!UBERON:0002410;6.78e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.22e-44,3;UBERON:0009751,1.22e-44,3;UBERON:0000946,1.22e-44,3;UBERON:0002523,1.22e-44,3;UBERON:0005983,1.22e-44,3;UBERON:0002165,1.22e-44,3;UBERON:0002062,1.22e-44,3;UBERON:0007280,1.22e-44,3;UBERON:0002146,2.58e-34,1;UBERON:0005623,2.58e-34,1;UBERON:0001874,5.05e-34,1;UBERON:0002134,7.06e-34,1;UBERON:0005208,7.06e-34,1;UBERON:0005946,7.06e-34,1;UBERON:0005965,7.06e-34,1;UBERON:0002078,7.06e-34,1;UBERON:0000948,1.63e-22,24;UBERON:0005498,1.63e-22,24;UBERON:0004140,1.63e-22,24;UBERON:0009881,1.63e-22,24;UBERON:0004141,1.63e-22,24;UBERON:0003084,1.63e-22,24;UBERON:0007005,1.63e-22,24;UBERON:0004139,1.63e-22,24;UBERON:0004291,1.63e-22,24;UBERON:0007100,4.30e-20,27;UBERON:0004797,7.84e-20,7;UBERON:0002081,1.07e-17,2;UBERON:0002133,1.07e-17,2;UBERON:0010227,1.07e-17,2;UBERON:0010313,3.25e-14,10;UBERON:0002342,3.25e-14,10;UBERON:0005062,3.25e-14,10;UBERON:0005383,2.59e-12,3;UBERON:0005382,2.59e-12,3;UBERON:0004151,2.89e-12,3;UBERON:0004145,2.89e-12,3;UBERON:0000369,1.44e-09,4;UBERON:0002435,1.44e-09,4;UBERON:0000204,1.44e-09,4;UBERON:0010082,1.44e-09,4;UBERON:0003103,2.48e-08,68;UBERON:0000013,6.13e-08,5;UBERON:0002410,6.13e-08,5;UBERON:0004872,6.53e-07,83|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:237505632..237505636,+ | |||
|id=chr1:237505632..237505636,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.96e-12;3!CL:0000737;1.17e-09;4!CL:0000333;6.78e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.85e-12,3;CL:0000513,1.85e-12,3;CL:0000737,1.12e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.97e-34;1!UBERON:0005062;7.07e-34;4!UBERON:0007284;7.07e-34;4!CL:0000513;1.96e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.54e-38!115;UBERON:0002780!4.28e-37!41;UBERON:0001890!4.28e-37!41;UBERON:0006240!4.28e-37!41;UBERON:0003080!4.55e-36!42;UBERON:0001049!1.49e-34!57;UBERON:0005068!1.49e-34!57;UBERON:0006241!1.49e-34!57;UBERON:0007135!1.49e-34!57;UBERON:0001869!1.79e-33!32;UBERON:0001893!3.14e-31!34;UBERON:0002020!3.19e-31!34;UBERON:0003528!3.19e-31!34;UBERON:0002616!1.21e-30!59;UBERON:0002791!3.33e-29!33;UBERON:0001017!5.35e-29!82;UBERON:0000955!5.94e-29!69;UBERON:0006238!5.94e-29!69;UBERON:0005743!2.85e-27!86;UBERON:0002346!1.76e-26!90;UBERON:0003075!3.80e-26!86;UBERON:0007284!3.80e-26!86;UBERON:0000073!8.02e-26!94;UBERON:0001016!8.02e-26!94;UBERON:0002619!7.72e-25!22;UBERON:0001950!8.77e-24!20;UBERON:0003056!6.87e-23!61;UBERON:0000956!1.58e-21!25;UBERON:0000203!1.58e-21!25;UBERON:0000200!3.31e-17!6;UBERON:0000924!2.75e-14!173;UBERON:0006601!2.75e-14!173;UBERON:0000033!3.22e-14!123;UBERON:0004121!8.51e-14!169;UBERON:0000153!3.31e-13!129;UBERON:0007811!3.31e-13!129;UBERON:0000369!1.65e-12!4;UBERON:0002435!1.65e-12!4;UBERON:0000204!1.65e-12!4;UBERON:0010082!1.65e-12!4;UBERON:0000025!6.33e-12!194;UBERON:0002420!2.87e-11!9;UBERON:0007245!2.87e-11!9;UBERON:0010009!2.87e-11!9;UBERON:0010011!2.87e-11!9;UBERON:0000454!2.87e-11!9;UBERON:0002308!3.03e-11!9;UBERON:0000125!3.03e-11!9;UBERON:0003978!1.37e-10!3;UBERON:0009751!1.37e-10!3;UBERON:0000946!1.37e-10!3;UBERON:0002523!1.37e-10!3;UBERON:0005983!1.37e-10!3;UBERON:0002165!1.37e-10!3;UBERON:0002062!1.37e-10!3;UBERON:0007280!1.37e-10!3;UBERON:0009663!1.60e-10!7;UBERON:0005383!2.18e-10!3;UBERON:0005382!2.18e-10!3;UBERON:0002771!1.39e-09!3;UBERON:0000477!1.95e-09!286;UBERON:0004111!2.98e-09!241;UBERON:0001871!5.33e-09!7;UBERON:0003296!1.20e-07!4;UBERON:0010133!1.20e-07!4;UBERON:0002133!1.46e-07!2;UBERON:0001873!2.18e-07!2;UBERON:0010122!2.18e-07!2;UBERON:0001905!2.87e-07!2;UBERON:0002757!2.87e-07!2;UBERON:0010134!2.87e-07!2;UBERON:0002784!2.87e-07!2;UBERON:0005408!2.87e-07!2;UBERON:0001899!2.87e-07!2;UBERON:0001894!3.34e-07!7;UBERON:0006222!3.34e-07!7;UBERON:0001870!6.64e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;9.77e-45;3!UBERON:0000946;9.77e-45;3!UBERON:0002146;2.18e-34;1!UBERON:0005623;2.18e-34;1!UBERON:0001874;5.97e-34;1!UBERON:0002134;5.97e-34;1!UBERON:0005208;5.97e-34;1!UBERON:0004145;5.97e-34;1!UBERON:0005946;5.97e-34;1!UBERON:0005965;5.97e-34;1!UBERON:0002078;5.97e-34;1!UBERON:0000948;1.51e-24;22!UBERON:0007100;1.09e-21;25!UBERON:0002081;9.86e-18;2!UBERON:0002133;9.86e-18;2!UBERON:0010313;3.04e-14;10!UBERON:0004151;2.74e-12;3!UBERON:0005383;2.74e-12;3!UBERON:0005382;2.74e-12;3!UBERON:0000369;1.50e-09;4!UBERON:0002435;1.50e-09;4!UBERON:0000204;1.50e-09;4!UBERON:0000013;6.78e-08;5!UBERON:0002410;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.22e-44,3;UBERON:0009751,1.22e-44,3;UBERON:0000946,1.22e-44,3;UBERON:0002523,1.22e-44,3;UBERON:0005983,1.22e-44,3;UBERON:0002165,1.22e-44,3;UBERON:0002062,1.22e-44,3;UBERON:0007280,1.22e-44,3;UBERON:0002146,2.58e-34,1;UBERON:0005623,2.58e-34,1;UBERON:0001874,5.05e-34,1;UBERON:0002134,7.06e-34,1;UBERON:0005208,7.06e-34,1;UBERON:0005946,7.06e-34,1;UBERON:0005965,7.06e-34,1;UBERON:0002078,7.06e-34,1;UBERON:0000948,1.63e-22,24;UBERON:0005498,1.63e-22,24;UBERON:0004140,1.63e-22,24;UBERON:0009881,1.63e-22,24;UBERON:0004141,1.63e-22,24;UBERON:0003084,1.63e-22,24;UBERON:0007005,1.63e-22,24;UBERON:0004139,1.63e-22,24;UBERON:0004291,1.63e-22,24;UBERON:0007100,4.30e-20,27;UBERON:0004797,7.84e-20,7;UBERON:0002081,1.07e-17,2;UBERON:0002133,1.07e-17,2;UBERON:0010227,1.07e-17,2;UBERON:0010313,3.25e-14,10;UBERON:0002342,3.25e-14,10;UBERON:0005062,3.25e-14,10;UBERON:0005383,2.59e-12,3;UBERON:0005382,2.59e-12,3;UBERON:0004151,2.89e-12,3;UBERON:0004145,2.89e-12,3;UBERON:0000369,1.44e-09,4;UBERON:0002435,1.44e-09,4;UBERON:0000204,1.44e-09,4;UBERON:0010082,1.44e-09,4;UBERON:0003103,2.48e-08,68;UBERON:0000013,6.13e-08,5;UBERON:0002410,6.13e-08,5;UBERON:0004872,6.53e-07,83 | |||
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|short_description=p@chr1:237505632..237505636,+ | |||
}} |
Revision as of 04:28, 12 September 2013
Short description: | p@chr1:237505632..237505636, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:237505632..237505636, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.85e-12 | 3 |
cardiac muscle myoblast | 1.85e-12 | 3 |
striated muscle cell | 1.12e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.02e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.