FFCP PHASE1:Hg19::chr1:218519541..218519558,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7042|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11768|TSSclassifier=S|UniProt=P61812|association_with_transcript=-18bp_to_ENST00000366929,ENST00000366930_5end|coexpression_cluster_id=C927|description=CAGE_peak_14_at_TGFB2_5end|id=chr1:218519541..218519558,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000064;2.91e-08;3!CL:0000067;2.91e-08;3!CL:0005012;2.91e-08;3!CL:0002304;2.91e-08;3!CL:0000632;6.46e-08;3!CL:0002590;6.46e-08;3|ontology_enrichment_celltype_v019_2=CL:0000064,1.99e-08,3;CL:0000067,1.99e-08,3;CL:0005012,1.99e-08,3;CL:0002304,1.99e-08,3;CL:0002590,3.82e-08,3;CL:0000632,8.88e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3350;1.89e-11;2|ontology_enrichment_disease_v019_2=DOID:3350,4.65e-11,2|ontology_enrichment_uberon=UBERON:0002200!2.28e-08!11;UBERON:0006876!2.28e-08!11;UBERON:0000475!2.07e-07!365|ontology_enrichment_uberon_v019=UBERON:0000488;9.45e-13;4!UBERON:0007625;3.49e-12;11!UBERON:0006876;6.06e-12;11!UBERON:0002203;1.18e-08;6!UBERON:0001768;1.18e-08;6!UBERON:0002200;1.18e-08;6!UBERON:0001778;2.91e-08;3!UBERON:0001775;2.91e-08;3!UBERON:0002294;1.85e-07;7!UBERON:0001173;1.85e-07;7!UBERON:0000019;6.16e-07;19!UBERON:0000047;6.16e-07;19!UBERON:0004088;6.16e-07;19!UBERON:0010230;6.16e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0000488,7.19e-13,4;UBERON:0007625,2.16e-12,11;UBERON:0006876,3.64e-12,11;UBERON:0002203,9.85e-09,6;UBERON:0001768,9.85e-09,6;UBERON:0002200,9.85e-09,6;UBERON:0001778,1.99e-08,3;UBERON:0001775,1.99e-08,3;UBERON:0003914,5.31e-07,117;UBERON:0000119,7.76e-07,309|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,1.72013755551056,1.39560233594486,0,0.263766978228454,0,0,0,0,1.46062018077475,0,0.246242116153576,1.22400414746552,0,0.286235987131057,0.410623275218653,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.850813354476611,1.77383517970051,4.47957407034943,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,1.43418310374407,0,0,0,2.22000793575444,0,0,0.163461903113459,0.756787138224657,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.751190294532984,0.226864366320042,0.538168907066586,0.427114777637135,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,0,0,0,0,0,1.3725424823882,0.439001141634502,0,0,0,0,0,0,0.231860809950154,14.6760867794777,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,1.17587489739202,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48768055066624,0.36669142910475,0.646358578788889,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,1.4377491329495,3.44585807502342,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.892144943985809,0.630809660135739,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,0.0920809889358963,0.114814448164607,0,0,0,0,0,2.92278449306521,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,1.96808787419823,0.650756789328606,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0.18532421910392,1.5743737541619,1.48863347743867,1.89827654831236,0.571890581771475,0,0,0.636406495851874,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0.876901770507525,0,0,1.21746226177622,0.6196469961995,0,0.143411352204052,0.491245205065606,0,0,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,0.844501632511974,0,0.276283915531148,0,0,0,0.933118762985422,0.449341755736634,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,1.59518878185802,0,0,0,0,0.457987967009312,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0.941798755221676,0,0,0,0,0.0979923974143777,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0,3.60714691131902,0,0.599428828746391,0,1.4889757501569,0.514784993585894,0,0,0,0.815425236441684,0.627617077873999,0.407992870545287,0.288950589901519,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7042 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11768 | |||
|TSSclassifier=S | |||
|UniProt=P61812 | |||
|association_with_transcript=-18bp_to_ENST00000366929,ENST00000366930_5end | |||
|coexpression_cluster_id=C927 | |||
|description=CAGE_peak_14_at_TGFB2_5end | |||
|id=chr1:218519541..218519558,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.91e-08;3!CL:0000067;2.91e-08;3!CL:0005012;2.91e-08;3!CL:0002304;2.91e-08;3!CL:0000632;6.46e-08;3!CL:0002590;6.46e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.99e-08,3;CL:0000067,1.99e-08,3;CL:0005012,1.99e-08,3;CL:0002304,1.99e-08,3;CL:0002590,3.82e-08,3;CL:0000632,8.88e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;1.89e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,4.65e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002200!2.28e-08!11;UBERON:0006876!2.28e-08!11;UBERON:0000475!2.07e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;9.45e-13;4!UBERON:0007625;3.49e-12;11!UBERON:0006876;6.06e-12;11!UBERON:0002203;1.18e-08;6!UBERON:0001768;1.18e-08;6!UBERON:0002200;1.18e-08;6!UBERON:0001778;2.91e-08;3!UBERON:0001775;2.91e-08;3!UBERON:0002294;1.85e-07;7!UBERON:0001173;1.85e-07;7!UBERON:0000019;6.16e-07;19!UBERON:0000047;6.16e-07;19!UBERON:0004088;6.16e-07;19!UBERON:0010230;6.16e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,7.19e-13,4;UBERON:0007625,2.16e-12,11;UBERON:0006876,3.64e-12,11;UBERON:0002203,9.85e-09,6;UBERON:0001768,9.85e-09,6;UBERON:0002200,9.85e-09,6;UBERON:0001778,1.99e-08,3;UBERON:0001775,1.99e-08,3;UBERON:0003914,5.31e-07,117;UBERON:0000119,7.76e-07,309 | |||
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| |||
|short_description=p14@TGFB2 | |||
}} |
Revision as of 03:40, 12 September 2013
Short description: | p14@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_TGFB2_5end |
Coexpression cluster: | C927_Lens_gall_Ciliary_mesodermal_Fibroblast_Meningeal_cholangiocellular |
Association with transcript: | -18bp_to_ENST00000366929, ENST00000366930_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | P61812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.99e-08 | 3 |
ciliated epithelial cell | 1.99e-08 | 3 |
multi-ciliated epithelial cell | 1.99e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.99e-08 | 3 |
smooth muscle cell of the brain vasculature | 3.82e-08 | 3 |
hepatic stellate cell | 8.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 7.19e-13 | 4 |
pigment epithelium of eye | 2.16e-12 | 11 |
vasculature of organ | 3.64e-12 | 11 |
vasculature of eye | 9.85e-09 | 6 |
uvea | 9.85e-09 | 6 |
vasculature of head | 9.85e-09 | 6 |
ciliary epithelium | 1.99e-08 | 3 |
ciliary body | 1.99e-08 | 3 |
epithelial tube | 5.31e-07 | 117 |
cell layer | 7.76e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 4.65e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.