FFCP PHASE1:Hg19::chr1:205313304..205313315,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55220|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25573|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000539253_5end|coexpression_cluster_id=C24|description=CAGE_peak_6_at_KLHDC8A_5end|id=chr1:205313304..205313315,-|ontology_enrichment_celltype=CL:0000764!4.59e-07!2;CL:0000765!4.59e-07!2;CL:0000050!4.59e-07!2;CL:0000038!4.59e-07!2;CL:0000558!4.59e-07!2;CL:0000547!4.59e-07!2;CL:0000549!4.59e-07!2;CL:0000550!4.59e-07!2;CL:0000552!4.59e-07!2|ontology_enrichment_celltype_v019=CL:0000333;1.29e-18;5!CL:0002321;7.75e-07;15|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.26e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;1.09e-15;6!DOID:171;8.27e-10;10!DOID:5409;8.85e-07;4|ontology_enrichment_disease_v019_2=DOID:169,9.04e-16,6;DOID:171,7.40e-10,10;DOID:5409,9.11e-07,4|ontology_enrichment_uberon=UBERON:0001049!1.64e-53!57;UBERON:0005068!1.64e-53!57;UBERON:0006241!1.64e-53!57;UBERON:0007135!1.64e-53!57;UBERON:0002616!5.50e-45!59;UBERON:0000073!1.04e-43!94;UBERON:0001016!1.04e-43!94;UBERON:0005743!2.72e-41!86;UBERON:0001017!3.65e-41!82;UBERON:0000955!3.79e-39!69;UBERON:0006238!3.79e-39!69;UBERON:0003075!6.00e-37!86;UBERON:0007284!6.00e-37!86;UBERON:0002020!1.03e-36!34;UBERON:0003528!1.03e-36!34;UBERON:0002780!3.50e-36!41;UBERON:0001890!3.50e-36!41;UBERON:0006240!3.50e-36!41;UBERON:0001869!1.96e-35!32;UBERON:0003080!3.48e-35!42;UBERON:0002346!6.79e-35!90;UBERON:0001893!4.44e-33!34;UBERON:0007023!1.98e-32!115;UBERON:0002791!1.08e-30!33;UBERON:0002619!2.04e-30!22;UBERON:0000956!8.60e-30!25;UBERON:0000203!8.60e-30!25;UBERON:0003056!1.21e-26!61;UBERON:0001950!1.26e-25!20;UBERON:0004121!1.04e-23!169;UBERON:0000924!6.49e-23!173;UBERON:0006601!6.49e-23!173;UBERON:0000033!1.38e-22!123;UBERON:0000153!1.39e-22!129;UBERON:0007811!1.39e-22!129;UBERON:0003076!2.42e-19!15;UBERON:0003057!2.42e-19!15;UBERON:0000200!2.76e-18!6;UBERON:0004733!6.29e-16!12;UBERON:0002028!6.29e-16!12;UBERON:0007277!6.29e-16!12;UBERON:0004732!1.38e-14!13;UBERON:0000025!2.54e-14!194;UBERON:0002680!1.83e-12!9;UBERON:0001895!1.83e-12!9;UBERON:0010092!1.83e-12!9;UBERON:0000064!2.93e-11!219;UBERON:0000988!1.21e-10!3;UBERON:0004111!2.12e-10!241;UBERON:0002298!5.60e-10!8;UBERON:0002771!9.62e-10!3;UBERON:0000349!1.00e-09!5;UBERON:0001871!3.08e-09!7;UBERON:0000477!3.69e-09!286;UBERON:0000483!1.84e-08!309;UBERON:0002308!1.90e-08!9;UBERON:0000125!1.90e-08!9;UBERON:0000119!2.78e-08!312;UBERON:0001905!5.68e-08!2;UBERON:0002757!5.68e-08!2;UBERON:0010134!5.68e-08!2;UBERON:0002784!5.68e-08!2;UBERON:0005408!5.68e-08!2;UBERON:0001899!5.68e-08!2;UBERON:0002148!1.36e-07!2;UBERON:0009662!1.36e-07!2;UBERON:0001870!2.33e-07!2;UBERON:0000369!2.63e-07!4;UBERON:0002435!2.63e-07!4;UBERON:0000204!2.63e-07!4;UBERON:0010082!2.63e-07!4;UBERON:0000475!4.48e-07!365;UBERON:0001954!5.51e-07!2;UBERON:0003022!5.51e-07!2;UBERON:0002421!5.51e-07!2;UBERON:0002600!5.51e-07!2|ontology_enrichment_uberon_v019=UBERON:0001905;2.03e-45;2!UBERON:0002757;2.03e-45;2!UBERON:0010134;2.03e-45;2!UBERON:0005408;2.03e-45;2!UBERON:0001899;2.03e-45;2!UBERON:0003296;2.63e-23;4!UBERON:0010133;2.63e-23;4!UBERON:0002784;2.63e-23;4!UBERON:0000013;1.29e-18;5!UBERON:0002410;1.29e-18;5!UBERON:0001894;8.94e-14;7!UBERON:0000010;8.57e-11;8!UBERON:0002680;1.02e-10;9!UBERON:0001895;1.02e-10;9!UBERON:0000988;1.26e-08;3!UBERON:0004733;2.85e-08;12!UBERON:0002028;2.85e-08;12!UBERON:0004732;1.05e-07;13!UBERON:0000073;1.22e-07;53!UBERON:0002616;1.22e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.04e-45,2;UBERON:0002757,2.04e-45,2;UBERON:0010134,2.04e-45,2;UBERON:0005408,2.04e-45,2;UBERON:0001899,2.04e-45,2;UBERON:0003296,2.63e-23,4;UBERON:0010133,2.63e-23,4;UBERON:0002784,2.63e-23,4;UBERON:0000013,1.04e-18,5;UBERON:0002410,1.04e-18,5;UBERON:0001894,8.94e-14,7;UBERON:0006222,8.94e-14,7;UBERON:0001016,1.22e-11,89;UBERON:0000010,7.58e-11,8;UBERON:0002680,1.07e-10,9;UBERON:0001895,1.07e-10,9;UBERON:0010092,1.07e-10,9;UBERON:0000073,2.17e-10,53;UBERON:0002616,2.17e-10,53;UBERON:0001049,7.51e-10,56;UBERON:0005068,7.51e-10,56;UBERON:0006241,7.51e-10,56;UBERON:0007135,7.51e-10,56;UBERON:0000988,1.51e-08,3;UBERON:0004733,2.96e-08,12;UBERON:0002028,2.96e-08,12;UBERON:0007277,2.96e-08,12;UBERON:0000955,4.81e-08,68;UBERON:0006238,4.81e-08,68;UBERON:0004732,1.09e-07,13;UBERON:0001017,8.50e-07,81;UBERON:0003075,8.50e-07,82;UBERON:0007284,8.50e-07,82;UBERON:0003076,8.83e-07,15;UBERON:0003057,8.83e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000539253_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_6_at_KLHDC8A_5end | |||
|id=chr1:205313304..205313315,- | |||
|ontology_enrichment_celltype=CL:0000764!4.59e-07!2;CL:0000765!4.59e-07!2;CL:0000050!4.59e-07!2;CL:0000038!4.59e-07!2;CL:0000558!4.59e-07!2;CL:0000547!4.59e-07!2;CL:0000549!4.59e-07!2;CL:0000550!4.59e-07!2;CL:0000552!4.59e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.29e-18;5!CL:0002321;7.75e-07;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.09e-15;6!DOID:171;8.27e-10;10!DOID:5409;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.04e-16,6;DOID:171,7.40e-10,10;DOID:5409,9.11e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.64e-53!57;UBERON:0005068!1.64e-53!57;UBERON:0006241!1.64e-53!57;UBERON:0007135!1.64e-53!57;UBERON:0002616!5.50e-45!59;UBERON:0000073!1.04e-43!94;UBERON:0001016!1.04e-43!94;UBERON:0005743!2.72e-41!86;UBERON:0001017!3.65e-41!82;UBERON:0000955!3.79e-39!69;UBERON:0006238!3.79e-39!69;UBERON:0003075!6.00e-37!86;UBERON:0007284!6.00e-37!86;UBERON:0002020!1.03e-36!34;UBERON:0003528!1.03e-36!34;UBERON:0002780!3.50e-36!41;UBERON:0001890!3.50e-36!41;UBERON:0006240!3.50e-36!41;UBERON:0001869!1.96e-35!32;UBERON:0003080!3.48e-35!42;UBERON:0002346!6.79e-35!90;UBERON:0001893!4.44e-33!34;UBERON:0007023!1.98e-32!115;UBERON:0002791!1.08e-30!33;UBERON:0002619!2.04e-30!22;UBERON:0000956!8.60e-30!25;UBERON:0000203!8.60e-30!25;UBERON:0003056!1.21e-26!61;UBERON:0001950!1.26e-25!20;UBERON:0004121!1.04e-23!169;UBERON:0000924!6.49e-23!173;UBERON:0006601!6.49e-23!173;UBERON:0000033!1.38e-22!123;UBERON:0000153!1.39e-22!129;UBERON:0007811!1.39e-22!129;UBERON:0003076!2.42e-19!15;UBERON:0003057!2.42e-19!15;UBERON:0000200!2.76e-18!6;UBERON:0004733!6.29e-16!12;UBERON:0002028!6.29e-16!12;UBERON:0007277!6.29e-16!12;UBERON:0004732!1.38e-14!13;UBERON:0000025!2.54e-14!194;UBERON:0002680!1.83e-12!9;UBERON:0001895!1.83e-12!9;UBERON:0010092!1.83e-12!9;UBERON:0000064!2.93e-11!219;UBERON:0000988!1.21e-10!3;UBERON:0004111!2.12e-10!241;UBERON:0002298!5.60e-10!8;UBERON:0002771!9.62e-10!3;UBERON:0000349!1.00e-09!5;UBERON:0001871!3.08e-09!7;UBERON:0000477!3.69e-09!286;UBERON:0000483!1.84e-08!309;UBERON:0002308!1.90e-08!9;UBERON:0000125!1.90e-08!9;UBERON:0000119!2.78e-08!312;UBERON:0001905!5.68e-08!2;UBERON:0002757!5.68e-08!2;UBERON:0010134!5.68e-08!2;UBERON:0002784!5.68e-08!2;UBERON:0005408!5.68e-08!2;UBERON:0001899!5.68e-08!2;UBERON:0002148!1.36e-07!2;UBERON:0009662!1.36e-07!2;UBERON:0001870!2.33e-07!2;UBERON:0000369!2.63e-07!4;UBERON:0002435!2.63e-07!4;UBERON:0000204!2.63e-07!4;UBERON:0010082!2.63e-07!4;UBERON:0000475!4.48e-07!365;UBERON:0001954!5.51e-07!2;UBERON:0003022!5.51e-07!2;UBERON:0002421!5.51e-07!2;UBERON:0002600!5.51e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.03e-45;2!UBERON:0002757;2.03e-45;2!UBERON:0010134;2.03e-45;2!UBERON:0005408;2.03e-45;2!UBERON:0001899;2.03e-45;2!UBERON:0003296;2.63e-23;4!UBERON:0010133;2.63e-23;4!UBERON:0002784;2.63e-23;4!UBERON:0000013;1.29e-18;5!UBERON:0002410;1.29e-18;5!UBERON:0001894;8.94e-14;7!UBERON:0000010;8.57e-11;8!UBERON:0002680;1.02e-10;9!UBERON:0001895;1.02e-10;9!UBERON:0000988;1.26e-08;3!UBERON:0004733;2.85e-08;12!UBERON:0002028;2.85e-08;12!UBERON:0004732;1.05e-07;13!UBERON:0000073;1.22e-07;53!UBERON:0002616;1.22e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.04e-45,2;UBERON:0002757,2.04e-45,2;UBERON:0010134,2.04e-45,2;UBERON:0005408,2.04e-45,2;UBERON:0001899,2.04e-45,2;UBERON:0003296,2.63e-23,4;UBERON:0010133,2.63e-23,4;UBERON:0002784,2.63e-23,4;UBERON:0000013,1.04e-18,5;UBERON:0002410,1.04e-18,5;UBERON:0001894,8.94e-14,7;UBERON:0006222,8.94e-14,7;UBERON:0001016,1.22e-11,89;UBERON:0000010,7.58e-11,8;UBERON:0002680,1.07e-10,9;UBERON:0001895,1.07e-10,9;UBERON:0010092,1.07e-10,9;UBERON:0000073,2.17e-10,53;UBERON:0002616,2.17e-10,53;UBERON:0001049,7.51e-10,56;UBERON:0005068,7.51e-10,56;UBERON:0006241,7.51e-10,56;UBERON:0007135,7.51e-10,56;UBERON:0000988,1.51e-08,3;UBERON:0004733,2.96e-08,12;UBERON:0002028,2.96e-08,12;UBERON:0007277,2.96e-08,12;UBERON:0000955,4.81e-08,68;UBERON:0006238,4.81e-08,68;UBERON:0004732,1.09e-07,13;UBERON:0001017,8.50e-07,81;UBERON:0003075,8.50e-07,82;UBERON:0007284,8.50e-07,82;UBERON:0003076,8.83e-07,15;UBERON:0003057,8.83e-07,15 | |||
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|short_description=p6@KLHDC8A | |||
}} |
Revision as of 03:04, 12 September 2013
Short description: | p6@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_KLHDC8A_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000539253_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.04e-16 | 6 |
neuroectodermal tumor | 7.40e-10 | 10 |
lung small cell carcinoma | 9.11e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.