FFCP PHASE1:Hg19::chr1:200638629..200638641,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000422640_5end|description=CAGE_peak_4_at_ENST00000422640_5end|id=chr1:200638629..200638641,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000650;8.59e-21;2!CL:1000500;8.59e-21;2!CL:1000618;8.59e-21;2!CL:1001318;8.59e-21;2!CL:0002173;8.59e-21;2!CL:0000669;6.98e-11;4|ontology_enrichment_celltype_v019_2=CL:0000650,2.35e-20,2;CL:1000500,2.35e-20,2;CL:1000618,2.35e-20,2;CL:1001318,2.35e-20,2;CL:0002173,2.35e-20,2;CL:0000669,1.15e-10,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.74e-24!57;UBERON:0005068!6.74e-24!57;UBERON:0006241!6.74e-24!57;UBERON:0007135!6.74e-24!57;UBERON:0000955!6.19e-22!69;UBERON:0006238!6.19e-22!69;UBERON:0002616!7.69e-21!59;UBERON:0002346!2.36e-20!90;UBERON:0003075!5.48e-20!86;UBERON:0007284!5.48e-20!86;UBERON:0005743!8.09e-20!86;UBERON:0001017!9.35e-20!82;UBERON:0003080!4.35e-18!42;UBERON:0000073!8.86e-18!94;UBERON:0001016!8.86e-18!94;UBERON:0002780!3.04e-17!41;UBERON:0001890!3.04e-17!41;UBERON:0006240!3.04e-17!41;UBERON:0007023!6.70e-16!115;UBERON:0001893!2.32e-14!34;UBERON:0003056!2.91e-14!61;UBERON:0002020!3.01e-14!34;UBERON:0003528!3.01e-14!34;UBERON:0002791!1.08e-13!33;UBERON:0001869!8.62e-13!32;UBERON:0000033!2.35e-12!123;UBERON:0000153!5.13e-12!129;UBERON:0007811!5.13e-12!129;UBERON:0002619!2.22e-11!22;UBERON:0000924!5.68e-11!173;UBERON:0006601!5.68e-11!173;UBERON:0004121!1.53e-10!169;UBERON:0000956!2.54e-10!25;UBERON:0000203!2.54e-10!25;UBERON:0001950!1.17e-09!20;UBERON:0000025!6.60e-09!194;UBERON:0002298!6.78e-09!8;UBERON:0000477!1.58e-07!286;UBERON:0004111!3.99e-07!241;UBERON:0003076!5.10e-07!15;UBERON:0003057!5.10e-07!15;UBERON:0000475!7.32e-07!365;UBERON:0000483!8.81e-07!309|ontology_enrichment_uberon_v019=UBERON:0003567;8.59e-21;2!UBERON:0003838;8.59e-21;2!UBERON:0003586;8.59e-21;2!UBERON:0005169;8.59e-21;2!UBERON:0002321;8.59e-21;2!UBERON:0005215;8.59e-21;2!UBERON:0002303;8.59e-21;2!UBERON:0002319;8.59e-21;2!UBERON:0001896;1.85e-14;3!UBERON:0005290;1.85e-14;3!UBERON:0002784;4.44e-11;4!UBERON:0003891;6.98e-11;4!UBERON:0002298;1.13e-07;6!UBERON:0000073;2.80e-07;53!UBERON:0002616;2.80e-07;53!UBERON:0002780;3.06e-07;41!UBERON:0001890;3.06e-07;41!UBERON:0000955;9.21e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0003567,2.35e-20,2;UBERON:0003838,2.35e-20,2;UBERON:0003586,2.35e-20,2;UBERON:0005169,2.35e-20,2;UBERON:0002321,2.35e-20,2;UBERON:0005215,2.35e-20,2;UBERON:0002303,2.35e-20,2;UBERON:0002319,2.35e-20,2;UBERON:0001896,1.73e-14,3;UBERON:0005290,1.73e-14,3;UBERON:0010096,1.73e-14,3;UBERON:0002784,3.83e-11,4;UBERON:0000073,6.65e-11,53;UBERON:0002616,6.65e-11,53;UBERON:0003891,1.15e-10,4;UBERON:0000955,2.03e-10,68;UBERON:0006238,2.03e-10,68;UBERON:0001049,2.80e-10,56;UBERON:0005068,2.80e-10,56;UBERON:0006241,2.80e-10,56;UBERON:0007135,2.80e-10,56;UBERON:0001017,1.35e-08,81;UBERON:0002780,3.84e-08,41;UBERON:0001890,3.84e-08,41;UBERON:0003080,3.84e-08,41;UBERON:0006240,3.84e-08,41;UBERON:0002298,1.09e-07,6;UBERON:0001016,1.23e-07,89;UBERON:0003075,9.36e-07,82;UBERON:0007284,9.36e-07,82;UBERON:0001894,9.93e-07,7;UBERON:0006222,9.93e-07,7|phase1_expression=0,0,0,0,0,0,0,0,1.04474251279935,0,0,0.218441372130172,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.579386075843295,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.427114777637135,0,0,0,0.257640540045629,0.37223371266318,0.168776332241266,0,0,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.579652024875384,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.14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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000422640_5end | |||
|description=CAGE_peak_4_at_ENST00000422640_5end | |||
|id=chr1:200638629..200638641,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000650;8.59e-21;2!CL:1000500;8.59e-21;2!CL:1000618;8.59e-21;2!CL:1001318;8.59e-21;2!CL:0002173;8.59e-21;2!CL:0000669;6.98e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,2.35e-20,2;CL:1000500,2.35e-20,2;CL:1000618,2.35e-20,2;CL:1001318,2.35e-20,2;CL:0002173,2.35e-20,2;CL:0000669,1.15e-10,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.74e-24!57;UBERON:0005068!6.74e-24!57;UBERON:0006241!6.74e-24!57;UBERON:0007135!6.74e-24!57;UBERON:0000955!6.19e-22!69;UBERON:0006238!6.19e-22!69;UBERON:0002616!7.69e-21!59;UBERON:0002346!2.36e-20!90;UBERON:0003075!5.48e-20!86;UBERON:0007284!5.48e-20!86;UBERON:0005743!8.09e-20!86;UBERON:0001017!9.35e-20!82;UBERON:0003080!4.35e-18!42;UBERON:0000073!8.86e-18!94;UBERON:0001016!8.86e-18!94;UBERON:0002780!3.04e-17!41;UBERON:0001890!3.04e-17!41;UBERON:0006240!3.04e-17!41;UBERON:0007023!6.70e-16!115;UBERON:0001893!2.32e-14!34;UBERON:0003056!2.91e-14!61;UBERON:0002020!3.01e-14!34;UBERON:0003528!3.01e-14!34;UBERON:0002791!1.08e-13!33;UBERON:0001869!8.62e-13!32;UBERON:0000033!2.35e-12!123;UBERON:0000153!5.13e-12!129;UBERON:0007811!5.13e-12!129;UBERON:0002619!2.22e-11!22;UBERON:0000924!5.68e-11!173;UBERON:0006601!5.68e-11!173;UBERON:0004121!1.53e-10!169;UBERON:0000956!2.54e-10!25;UBERON:0000203!2.54e-10!25;UBERON:0001950!1.17e-09!20;UBERON:0000025!6.60e-09!194;UBERON:0002298!6.78e-09!8;UBERON:0000477!1.58e-07!286;UBERON:0004111!3.99e-07!241;UBERON:0003076!5.10e-07!15;UBERON:0003057!5.10e-07!15;UBERON:0000475!7.32e-07!365;UBERON:0000483!8.81e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;8.59e-21;2!UBERON:0003838;8.59e-21;2!UBERON:0003586;8.59e-21;2!UBERON:0005169;8.59e-21;2!UBERON:0002321;8.59e-21;2!UBERON:0005215;8.59e-21;2!UBERON:0002303;8.59e-21;2!UBERON:0002319;8.59e-21;2!UBERON:0001896;1.85e-14;3!UBERON:0005290;1.85e-14;3!UBERON:0002784;4.44e-11;4!UBERON:0003891;6.98e-11;4!UBERON:0002298;1.13e-07;6!UBERON:0000073;2.80e-07;53!UBERON:0002616;2.80e-07;53!UBERON:0002780;3.06e-07;41!UBERON:0001890;3.06e-07;41!UBERON:0000955;9.21e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,2.35e-20,2;UBERON:0003838,2.35e-20,2;UBERON:0003586,2.35e-20,2;UBERON:0005169,2.35e-20,2;UBERON:0002321,2.35e-20,2;UBERON:0005215,2.35e-20,2;UBERON:0002303,2.35e-20,2;UBERON:0002319,2.35e-20,2;UBERON:0001896,1.73e-14,3;UBERON:0005290,1.73e-14,3;UBERON:0010096,1.73e-14,3;UBERON:0002784,3.83e-11,4;UBERON:0000073,6.65e-11,53;UBERON:0002616,6.65e-11,53;UBERON:0003891,1.15e-10,4;UBERON:0000955,2.03e-10,68;UBERON:0006238,2.03e-10,68;UBERON:0001049,2.80e-10,56;UBERON:0005068,2.80e-10,56;UBERON:0006241,2.80e-10,56;UBERON:0007135,2.80e-10,56;UBERON:0001017,1.35e-08,81;UBERON:0002780,3.84e-08,41;UBERON:0001890,3.84e-08,41;UBERON:0003080,3.84e-08,41;UBERON:0006240,3.84e-08,41;UBERON:0002298,1.09e-07,6;UBERON:0001016,1.23e-07,89;UBERON:0003075,9.36e-07,82;UBERON:0007284,9.36e-07,82;UBERON:0001894,9.93e-07,7;UBERON:0006222,9.93e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.04474251279935,0,0,0.218441372130172,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.579386075843295,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.427114777637135,0,0,0,0.257640540045629,0.37223371266318,0.168776332241266,0,0,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.579652024875384,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,1.00034104211935,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.229628896329213,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,0,0,1.08378575017541,1.00337954770971,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0.384380134730212,0,0,1.39453664789186,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0,0,0.121360521749513,0.334330152832435,0,0,0.296964680832639,0.307160702099232,0.994147647766298,1.26602474769461,0.222617410045812,0,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,3.99227596002388,0,0.174919999992391,0.724999575434793,0,0.254253650292766,0,0.689486746482929,0.583209226766509,0,0.885741385813839,1.20596438625408,0,0.331737779793674,0.591095237907095,0,0.21787692703798,0,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.468528891450678,0,0,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.443175571691151,0,0.400794101257669,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0.313808538937,0.101998217636322,0.288950589901519,0,0.958337652243951,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0.817220436669454,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0.262272940674991,0,0,0,0,0,0,0,1.72844298240254,0.653174720218818,0,0.082092520749339,0,0,0,0,0.517131825446202,0.26446520348538,0.171086837884329,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.610131324509816,0.3755727921195,2.86704597845036,0.887432412294818,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0,0,0.256241518587947,0,0,0.414775308455192,0,0,0.327130788511688,0.655219697692825,0,0,0,0.320075189082423,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0.218419276384028,0.33946505990805,0.425149840203366,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0.159633859057151,0.41023272848151,0.252071696221718,0.829887029570615,0.484426936895553,0,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.337687923091973,0.781078098613847,1.03343398250592,0.443910671357348,0,0,0,0,0.127762427639595,0,1.3451348888753,0,0.682986574053893,0,0.115233987555779,0,0.543757863814654,0.460409414939944,0,0,0.078493092850514,0,0,0,0,0,0.142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| |||
|short_description=p4@ENST00000422640 | |||
}} |
Revision as of 02:41, 12 September 2013
Short description: | p4@ENST00000422640 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ENST00000422640_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000422640_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 2.35e-20 | 2 |
kidney interstitial cell | 2.35e-20 | 2 |
juxtaglomerular complex cell | 2.35e-20 | 2 |
renal interstitial pericyte | 2.35e-20 | 2 |
extraglomerular mesangial cell | 2.35e-20 | 2 |
pericyte cell | 1.15e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 2.35e-20 | 2 |
abdominal segment connective tissue | 2.35e-20 | 2 |
trunk connective tissue | 2.35e-20 | 2 |
interstitial tissue | 2.35e-20 | 2 |
extraglomerular mesangium | 2.35e-20 | 2 |
kidney interstitium | 2.35e-20 | 2 |
juxtaglomerular apparatus | 2.35e-20 | 2 |
mesangium | 2.35e-20 | 2 |
medulla oblongata | 1.73e-14 | 3 |
myelencephalon | 1.73e-14 | 3 |
future myelencephalon | 1.73e-14 | 3 |
regional part of diencephalon | 3.83e-11 | 4 |
regional part of nervous system | 6.65e-11 | 53 |
regional part of brain | 6.65e-11 | 53 |
stroma | 1.15e-10 | 4 |
brain | 2.03e-10 | 68 |
future brain | 2.03e-10 | 68 |
neural tube | 2.80e-10 | 56 |
neural rod | 2.80e-10 | 56 |
future spinal cord | 2.80e-10 | 56 |
neural keel | 2.80e-10 | 56 |
central nervous system | 1.35e-08 | 81 |
regional part of forebrain | 3.84e-08 | 41 |
forebrain | 3.84e-08 | 41 |
anterior neural tube | 3.84e-08 | 41 |
future forebrain | 3.84e-08 | 41 |
brainstem | 1.09e-07 | 6 |
nervous system | 1.23e-07 | 89 |
neural plate | 9.36e-07 | 82 |
presumptive neural plate | 9.36e-07 | 82 |
diencephalon | 9.93e-07 | 7 |
future diencephalon | 9.93e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.