FFCP PHASE1:Hg19::chr1:155291376..155291428,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23623|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=17153|TSSclassifier=S|UniProt=|association_with_transcript=-50bp_to_uc009wqn.1_5end|coexpression_cluster_id=C146|description=CAGE_peak_6_at_RUSC1_5end|id=chr1:155291376..155291428,+|ontology_enrichment_celltype=CL:0002322!1.26e-11!5|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;3.52e-11;2!UBERON:0006241;5.18e-08;3!UBERON:0003057;5.18e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.25e-30!115;UBERON:0001049!1.05e-26!57;UBERON:0005068!1.05e-26!57;UBERON:0006241!1.05e-26!57;UBERON:0007135!1.05e-26!57;UBERON:0003075!1.74e-22!86;UBERON:0007284!1.74e-22!86;UBERON:0002020!1.82e-21!34;UBERON:0003528!1.82e-21!34;UBERON:0002616!2.42e-21!59;UBERON:0002346!4.49e-21!90;UBERON:0001893!1.02e-20!34;UBERON:0001869!4.36e-20!32;UBERON:0002791!2.95e-19!33;UBERON:0005743!4.32e-19!86;UBERON:0001017!7.79e-19!82;UBERON:0002780!1.67e-18!41;UBERON:0001890!1.67e-18!41;UBERON:0006240!1.67e-18!41;UBERON:0003080!6.10e-18!42;UBERON:0000073!6.35e-18!94;UBERON:0001016!6.35e-18!94;UBERON:0000955!7.24e-17!69;UBERON:0006238!7.24e-17!69;UBERON:0000956!2.86e-16!25;UBERON:0000203!2.86e-16!25;UBERON:0001950!1.67e-15!20;UBERON:0002619!7.00e-14!22;UBERON:0003056!4.00e-12!61;UBERON:0004121!1.15e-10!169;UBERON:0000153!1.27e-10!129;UBERON:0007811!1.27e-10!129;UBERON:0000924!3.34e-10!173;UBERON:0006601!3.34e-10!173;UBERON:0003076!4.07e-10!15;UBERON:0003057!4.07e-10!15;UBERON:0001871!4.19e-10!7;UBERON:0000033!1.03e-09!123;UBERON:0000200!2.23e-09!6;UBERON:0000988!5.40e-09!3;UBERON:0000025!1.53e-07!194;UBERON:0002771!2.04e-07!3;UBERON:0004733!2.27e-07!12;UBERON:0002028!2.27e-07!12;UBERON:0007277!2.27e-07!12;UBERON:0002680!4.09e-07!9;UBERON:0001895!4.09e-07!9;UBERON:0010092!4.09e-07!9;UBERON:0004111!6.35e-07!241;UBERON:0004732!9.82e-07!13|ontology_enrichment_uberon_v019=UBERON:0000988;1.49e-59;3!UBERON:0002298;1.10e-52;6!UBERON:0002148;1.82e-40;2!UBERON:0006331;1.82e-40;2!UBERON:0009662;1.82e-40;2!UBERON:0004733;1.19e-26;12!UBERON:0002028;1.19e-26;12!UBERON:0004732;1.22e-24;13!UBERON:0002680;1.98e-20;9!UBERON:0001895;1.98e-20;9!UBERON:0001897;2.23e-11;2!UBERON:0010225;2.23e-11;2!UBERON:0000125;8.27e-10;9!UBERON:0002308;8.27e-10;9!UBERON:0002240;5.18e-08;3!UBERON:0005174;5.18e-08;3!UBERON:0001137;5.18e-08;3!UBERON:0001896;7.02e-08;3!UBERON:0005290;7.02e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0000988,1.83e-59,3;UBERON:0002298,1.03e-52,6;UBERON:0002148,2.46e-40,2;UBERON:0006331,2.46e-40,2;UBERON:0009662,2.46e-40,2;UBERON:0003076,5.17e-33,15;UBERON:0003057,5.17e-33,15;UBERON:0004733,1.15e-26,12;UBERON:0002028,1.15e-26,12;UBERON:0007277,1.15e-26,12;UBERON:0004732,1.18e-24,13;UBERON:0002680,2.11e-20,9;UBERON:0001895,2.11e-20,9;UBERON:0010092,2.11e-20,9;UBERON:0001049,1.77e-12,56;UBERON:0005068,1.77e-12,56;UBERON:0006241,1.77e-12,56;UBERON:0007135,1.77e-12,56;UBERON:0001897,2.23e-11,2;UBERON:0010225,2.23e-11,2;UBERON:0001016,2.53e-10,89;UBERON:0000125,8.84e-10,9;UBERON:0002308,8.84e-10,9;UBERON:0000073,2.58e-09,53;UBERON:0002616,2.58e-09,53;UBERON:0001017,1.55e-08,81;UBERON:0003075,1.55e-08,82;UBERON:0007284,1.55e-08,82;UBERON:0002346,3.88e-08,86;UBERON:0002240,5.54e-08,3;UBERON:0005174,5.54e-08,3;UBERON:0001137,5.54e-08,3;UBERON:0001896,6.34e-08,3;UBERON:0005290,6.34e-08,3;UBERON:0010096,6.34e-08,3;UBERON:0000955,3.37e-07,68;UBERON:0006238,3.37e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0.572471974262113,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.932949495138334,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0,0.994147647766298,0,0,0,0,1.1954879295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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23623 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17153 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-50bp_to_uc009wqn.1_5end | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_6_at_RUSC1_5end | |||
|id=chr1:155291376..155291428,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.26e-11!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;3.52e-11;2!UBERON:0006241;5.18e-08;3!UBERON:0003057;5.18e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-30!115;UBERON:0001049!1.05e-26!57;UBERON:0005068!1.05e-26!57;UBERON:0006241!1.05e-26!57;UBERON:0007135!1.05e-26!57;UBERON:0003075!1.74e-22!86;UBERON:0007284!1.74e-22!86;UBERON:0002020!1.82e-21!34;UBERON:0003528!1.82e-21!34;UBERON:0002616!2.42e-21!59;UBERON:0002346!4.49e-21!90;UBERON:0001893!1.02e-20!34;UBERON:0001869!4.36e-20!32;UBERON:0002791!2.95e-19!33;UBERON:0005743!4.32e-19!86;UBERON:0001017!7.79e-19!82;UBERON:0002780!1.67e-18!41;UBERON:0001890!1.67e-18!41;UBERON:0006240!1.67e-18!41;UBERON:0003080!6.10e-18!42;UBERON:0000073!6.35e-18!94;UBERON:0001016!6.35e-18!94;UBERON:0000955!7.24e-17!69;UBERON:0006238!7.24e-17!69;UBERON:0000956!2.86e-16!25;UBERON:0000203!2.86e-16!25;UBERON:0001950!1.67e-15!20;UBERON:0002619!7.00e-14!22;UBERON:0003056!4.00e-12!61;UBERON:0004121!1.15e-10!169;UBERON:0000153!1.27e-10!129;UBERON:0007811!1.27e-10!129;UBERON:0000924!3.34e-10!173;UBERON:0006601!3.34e-10!173;UBERON:0003076!4.07e-10!15;UBERON:0003057!4.07e-10!15;UBERON:0001871!4.19e-10!7;UBERON:0000033!1.03e-09!123;UBERON:0000200!2.23e-09!6;UBERON:0000988!5.40e-09!3;UBERON:0000025!1.53e-07!194;UBERON:0002771!2.04e-07!3;UBERON:0004733!2.27e-07!12;UBERON:0002028!2.27e-07!12;UBERON:0007277!2.27e-07!12;UBERON:0002680!4.09e-07!9;UBERON:0001895!4.09e-07!9;UBERON:0010092!4.09e-07!9;UBERON:0004111!6.35e-07!241;UBERON:0004732!9.82e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;1.49e-59;3!UBERON:0002298;1.10e-52;6!UBERON:0002148;1.82e-40;2!UBERON:0006331;1.82e-40;2!UBERON:0009662;1.82e-40;2!UBERON:0004733;1.19e-26;12!UBERON:0002028;1.19e-26;12!UBERON:0004732;1.22e-24;13!UBERON:0002680;1.98e-20;9!UBERON:0001895;1.98e-20;9!UBERON:0001897;2.23e-11;2!UBERON:0010225;2.23e-11;2!UBERON:0000125;8.27e-10;9!UBERON:0002308;8.27e-10;9!UBERON:0002240;5.18e-08;3!UBERON:0005174;5.18e-08;3!UBERON:0001137;5.18e-08;3!UBERON:0001896;7.02e-08;3!UBERON:0005290;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,1.83e-59,3;UBERON:0002298,1.03e-52,6;UBERON:0002148,2.46e-40,2;UBERON:0006331,2.46e-40,2;UBERON:0009662,2.46e-40,2;UBERON:0003076,5.17e-33,15;UBERON:0003057,5.17e-33,15;UBERON:0004733,1.15e-26,12;UBERON:0002028,1.15e-26,12;UBERON:0007277,1.15e-26,12;UBERON:0004732,1.18e-24,13;UBERON:0002680,2.11e-20,9;UBERON:0001895,2.11e-20,9;UBERON:0010092,2.11e-20,9;UBERON:0001049,1.77e-12,56;UBERON:0005068,1.77e-12,56;UBERON:0006241,1.77e-12,56;UBERON:0007135,1.77e-12,56;UBERON:0001897,2.23e-11,2;UBERON:0010225,2.23e-11,2;UBERON:0001016,2.53e-10,89;UBERON:0000125,8.84e-10,9;UBERON:0002308,8.84e-10,9;UBERON:0000073,2.58e-09,53;UBERON:0002616,2.58e-09,53;UBERON:0001017,1.55e-08,81;UBERON:0003075,1.55e-08,82;UBERON:0007284,1.55e-08,82;UBERON:0002346,3.88e-08,86;UBERON:0002240,5.54e-08,3;UBERON:0005174,5.54e-08,3;UBERON:0001137,5.54e-08,3;UBERON:0001896,6.34e-08,3;UBERON:0005290,6.34e-08,3;UBERON:0010096,6.34e-08,3;UBERON:0000955,3.37e-07,68;UBERON:0006238,3.37e-07,68 | |||
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|short_description=p6@RUSC1 | |||
}} |
Revision as of 00:45, 12 September 2013
Short description: | p6@RUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RUSC1_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | -50bp_to_uc009wqn.1_5end |
EntrezGene: | RUSC1 |
HGNC: | 17153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.