FFCP PHASE1:Hg19::chr1:95582841..95582862,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=148534|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26477|TSSclassifier=S|UniProt=Q96MV1|association_with_transcript=-31bp_to_ENST00000370203,NM_152487,uc001drb.2_5end|coexpression_cluster_id=C33|description=CAGE_peak_2_at_TMEM56_5end|id=chr1:95582841..95582862,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;2.31e-07;2!CL:0000558;2.31e-07;2|ontology_enrichment_celltype_v019_2=CL:0000764,2.33e-07,2;CL:0000765,2.33e-07,2;CL:0000050,2.33e-07,2;CL:0000038,2.33e-07,2;CL:0000558,2.33e-07,2;CL:0000547,2.33e-07,2;CL:0000549,2.33e-07,2;CL:0000550,2.33e-07,2;CL:0000552,2.33e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!4.18e-10!106;DOID:0050687!6.74e-09!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.09e-33!115;UBERON:0003075!6.63e-15!86;UBERON:0007284!6.63e-15!86;UBERON:0002346!6.88e-14!90;UBERON:0001049!3.46e-13!57;UBERON:0005068!3.46e-13!57;UBERON:0006241!3.46e-13!57;UBERON:0007135!3.46e-13!57;UBERON:0005743!1.76e-12!86;UBERON:0000955!4.49e-12!69;UBERON:0006238!4.49e-12!69;UBERON:0001017!1.64e-11!82;UBERON:0000073!2.84e-11!94;UBERON:0001016!2.84e-11!94;UBERON:0002616!7.41e-11!59;UBERON:0002780!6.75e-10!41;UBERON:0001890!6.75e-10!41;UBERON:0006240!6.75e-10!41;UBERON:0003080!2.05e-09!42;UBERON:0002020!2.92e-09!34;UBERON:0003528!2.92e-09!34;UBERON:0003056!3.93e-09!61;UBERON:0000481!3.93e-09!347;UBERON:0001893!4.01e-09!34;UBERON:0002791!8.00e-09!33;UBERON:0001869!1.24e-08!32;UBERON:0004921!1.01e-07!129;UBERON:0004185!1.01e-07!129;UBERON:0001950!1.03e-07!20;UBERON:0000153!1.92e-07!129;UBERON:0007811!1.92e-07!129;UBERON:0000033!2.73e-07!123;UBERON:0002619!3.49e-07!22;UBERON:0001007!4.75e-07!155;UBERON:0001555!4.75e-07!155;UBERON:0007026!4.75e-07!155;UBERON:0000956!5.88e-07!25;UBERON:0000203!5.88e-07!25;UBERON:0000064!8.66e-07!219|ontology_enrichment_uberon_v019=UBERON:0000178;5.63e-11;15!UBERON:0000179;5.63e-11;15!UBERON:0000463;5.63e-11;15!UBERON:0007100;6.76e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.72e-20,114;UBERON:0000178,5.42e-11,15;UBERON:0000179,5.42e-11,15;UBERON:0000463,5.42e-11,15|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0.526768169550154,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0.661743720148475,0.665188192387692,0.614843499851882,0.982343066232845,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.591534000199219,0.842923450390509,0.482022059766964,0.55146986366197,1.52515610864684,0.71181185733329,0.943819157121151,0.588664395376038,0,0,0,0.4115740113314,0,2.53510069643662,0.982827216677626,5.90789906681404,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.613457458595699,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.393373244878272,0,0.462092022626489,0,0,0.633309773357254,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,16.883010501737,19.8690942778924,1.79515087581472,0,0.325378394664303,1.23649213977267,0.457847324091717,0.742585499285292,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.41215701165169,0,0,0,0,5.58192370155386,2.29391162142713,2.27858874869665,0.714695326373367,0.411362273086194,3.24236655596359,1.62009431171434,2.37937552888281,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,4.92349595790849,0.270455678475983,0,0,0.37428108081644,0.146508179271894,0.606802608747567,0.111443384277478,0.568272293612826,0,0,0,1.9882952955326,0.140669416410513,0,0.16480387422676,0.422250816255987,0.597743964753209,0.552567831062295,0.251932747854276,0.306806047506464,0.615424027305347,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=148534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26477 | |||
|TSSclassifier=S | |||
|UniProt=Q96MV1 | |||
|association_with_transcript=-31bp_to_ENST00000370203,NM_152487,uc001drb.2_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_TMEM56_5end | |||
|id=chr1:95582841..95582862,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.31e-07;2!CL:0000558;2.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.33e-07,2;CL:0000765,2.33e-07,2;CL:0000050,2.33e-07,2;CL:0000038,2.33e-07,2;CL:0000558,2.33e-07,2;CL:0000547,2.33e-07,2;CL:0000549,2.33e-07,2;CL:0000550,2.33e-07,2;CL:0000552,2.33e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.18e-10!106;DOID:0050687!6.74e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-33!115;UBERON:0003075!6.63e-15!86;UBERON:0007284!6.63e-15!86;UBERON:0002346!6.88e-14!90;UBERON:0001049!3.46e-13!57;UBERON:0005068!3.46e-13!57;UBERON:0006241!3.46e-13!57;UBERON:0007135!3.46e-13!57;UBERON:0005743!1.76e-12!86;UBERON:0000955!4.49e-12!69;UBERON:0006238!4.49e-12!69;UBERON:0001017!1.64e-11!82;UBERON:0000073!2.84e-11!94;UBERON:0001016!2.84e-11!94;UBERON:0002616!7.41e-11!59;UBERON:0002780!6.75e-10!41;UBERON:0001890!6.75e-10!41;UBERON:0006240!6.75e-10!41;UBERON:0003080!2.05e-09!42;UBERON:0002020!2.92e-09!34;UBERON:0003528!2.92e-09!34;UBERON:0003056!3.93e-09!61;UBERON:0000481!3.93e-09!347;UBERON:0001893!4.01e-09!34;UBERON:0002791!8.00e-09!33;UBERON:0001869!1.24e-08!32;UBERON:0004921!1.01e-07!129;UBERON:0004185!1.01e-07!129;UBERON:0001950!1.03e-07!20;UBERON:0000153!1.92e-07!129;UBERON:0007811!1.92e-07!129;UBERON:0000033!2.73e-07!123;UBERON:0002619!3.49e-07!22;UBERON:0001007!4.75e-07!155;UBERON:0001555!4.75e-07!155;UBERON:0007026!4.75e-07!155;UBERON:0000956!5.88e-07!25;UBERON:0000203!5.88e-07!25;UBERON:0000064!8.66e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.63e-11;15!UBERON:0000179;5.63e-11;15!UBERON:0000463;5.63e-11;15!UBERON:0007100;6.76e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.72e-20,114;UBERON:0000178,5.42e-11,15;UBERON:0000179,5.42e-11,15;UBERON:0000463,5.42e-11,15 | |||
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| |||
|short_description=p2@TMEM56 | |||
}} |
Revision as of 07:20, 12 September 2013
Short description: | p2@TMEM56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TMEM56_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -31bp_to_ENST00000370203, NM_152487, uc001drb.2_5end |
EntrezGene: | TMEM56 |
HGNC: | 26477 |
UniProt: | Q96MV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.33e-07 | 2 |
erythroblast | 2.33e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.33e-07 | 2 |
erythroid progenitor cell | 2.33e-07 | 2 |
reticulocyte | 2.33e-07 | 2 |
proerythroblast | 2.33e-07 | 2 |
basophilic erythroblast | 2.33e-07 | 2 |
polychromatophilic erythroblast | 2.33e-07 | 2 |
orthochromatic erythroblast | 2.33e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.72e-20 | 114 |
blood | 5.42e-11 | 15 |
haemolymphatic fluid | 5.42e-11 | 15 |
organism substance | 5.42e-11 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.