FFCP PHASE1:Hg19::chr1:53098820..53098860,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=348378|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28757|TSSclassifier=W|UniProt=|association_with_transcript=-155bp_to_ENST00000440303,ENST00000517870_5end|coexpression_cluster_id=C57|description=CAGE_peak_1_at_FAM159A_5end|id=chr1:53098820..53098860,+|ontology_enrichment_celltype=CL:0000738!6.27e-29!140;CL:0002087!1.41e-27!119;CL:0002031!1.51e-21!124;CL:0000037!9.35e-21!172;CL:0000566!9.35e-21!172;CL:0002032!1.03e-19!165;CL:0000837!1.03e-19!165;CL:0000988!9.19e-18!182;CL:0000542!1.15e-17!53;CL:0000051!1.15e-17!53;CL:0000838!4.90e-17!52;CL:0000791!1.51e-16!18;CL:0000789!1.51e-16!18;CL:0002420!1.51e-16!18;CL:0002419!1.51e-16!18;CL:0000790!1.51e-16!18;CL:0000766!1.10e-11!76;CL:0000625!9.72e-11!11;CL:0002057!2.08e-10!42;CL:0000084!1.10e-09!25;CL:0000827!1.10e-09!25;CL:0000236!1.42e-09!14;CL:0002194!3.23e-09!63;CL:0000576!3.23e-09!63;CL:0000040!3.23e-09!63;CL:0000559!3.23e-09!63;CL:0000860!5.02e-09!45;CL:0002009!1.46e-08!65;CL:0000557!6.31e-08!71;CL:0000839!1.59e-07!70;CL:0000945!6.89e-07!24;CL:0000826!6.89e-07!24;CL:0000094!9.41e-07!8|ontology_enrichment_celltype_v019=CL:0000791;2.44e-25;18!CL:0000789;2.44e-25;18!CL:0002419;2.44e-25;18!CL:0000542;3.05e-17;53!CL:0000084;1.79e-16;25!CL:0000625;4.05e-16;11!CL:0000236;2.96e-14;13!CL:0002087;8.30e-14;104!CL:0000860;7.49e-11;33!CL:0002057;7.49e-11;33!CL:0000945;9.61e-10;24!CL:0000624;1.12e-09;6!CL:0000094;1.19e-09;8!CL:0000576;1.46e-08;48!CL:0000738;2.29e-08;136!CL:0000473;6.03e-07;39!CL:0000234;6.03e-07;39|ontology_enrichment_celltype_v019_2=CL:0000738,6.71e-40,136;CL:0002087,4.68e-39,115;CL:0000037,4.35e-31,168;CL:0002031,8.81e-31,120;CL:0002032,9.62e-30,161;CL:0000837,9.62e-30,161;CL:0000542,9.33e-29,53;CL:0000051,9.33e-29,53;CL:0000988,2.84e-28,177;CL:0000838,9.74e-28,52;CL:0000791,2.51e-25,18;CL:0000789,2.51e-25,18;CL:0002420,2.51e-25,18;CL:0002419,2.51e-25,18;CL:0000790,2.51e-25,18;CL:0000084,1.82e-16,25;CL:0000827,1.82e-16,25;CL:0000625,4.19e-16,11;CL:0000236,5.22e-15,14;CL:0000766,9.65e-14,72;CL:0000860,3.23e-10,42;CL:0002057,3.23e-10,42;CL:0002194,5.78e-10,59;CL:0000576,5.78e-10,59;CL:0000040,5.78e-10,59;CL:0000559,5.78e-10,59;CL:0000094,8.43e-10,8;CL:0000945,9.21e-10,24;CL:0000826,9.21e-10,24;CL:0000624,1.11e-09,6;CL:0002009,2.14e-09,61;CL:0000473,4.41e-09,48;CL:0000234,4.41e-09,48;CL:0000557,1.05e-08,67;CL:0000839,3.83e-08,66;CL:0000763,6.73e-08,108;CL:0000049,6.73e-08,108|ontology_enrichment_development_v019=CL:0000790;2.44e-25;18!CL:0000051;3.05e-17;53!CL:0002057;9.40e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.95e-25!115;UBERON:0002390!4.08e-13!102;UBERON:0003061!4.08e-13!102;UBERON:0002193!3.49e-12!112;UBERON:0001049!9.75e-09!57;UBERON:0005068!9.75e-09!57;UBERON:0006241!9.75e-09!57;UBERON:0007135!9.75e-09!57;UBERON:0000178!7.35e-08!15;UBERON:0000179!7.35e-08!15;UBERON:0000463!7.35e-08!15;UBERON:0002780!5.75e-07!41;UBERON:0001890!5.75e-07!41;UBERON:0006240!5.75e-07!41|ontology_enrichment_uberon_v019=UBERON:0000178;1.44e-12;15!UBERON:0000179;1.44e-12;15!UBERON:0000463;1.44e-12;15!UBERON:0002390;2.34e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.84e-18,98;UBERON:0003061,9.84e-18,98;UBERON:0002193,7.95e-17,108;UBERON:0000178,1.60e-12,15;UBERON:0000179,1.60e-12,15;UBERON:0000463,1.60e-12,15;UBERON:0002405,2.05e-09,93;UBERON:0002371,7.86e-07,76;UBERON:0004177,7.92e-07,7;UBERON:0005057,7.92e-07,7|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,2.30297638858328,2.47705797305722,0,0,0,1.47187681102573,0,0,1.66198622559563,3.40925560699241,4.12320654360118,0.671746422719773,7.12566065241755,2.06060454107349,3.34415949192999,5.29026321164333,5.33684934613196,2.09186133215116,3.28934310417461,4.33588919253145,0,1.0246428261164,2.83778675866302,0.689491361473237,0.645484683583826,1.35426486594342,3.01187743268168,4.91231070104122,3.59557575112135,2.14258724659632,1.60464513538047,2.55734850319616,0,0.797854630486527,1.27867425159808,0.580418477257168,2.26954089876456,1.24564449799115,0.251248665256743,0.521482918420201,1.95469960234605,1.21079900526674,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,42.2390986707174,33.8605938982522,33.8013516468151,26.88400402169,32.832470936953,32.7608890774055,37.6795577487371,33.3918814087377,29.0298614245819,21.7277760067247,28.2882188812669,0,1.12101712596307,0.790152254325231,23.4084626435461,13.7553766962208,15.4201124249632,23.5732958500856,39.1106719960308,45.4509893505344,21.4309401248702,9.58129929212493,19.7385958008141,17.9442454612733,16.789839553431,7.30120522436348,5.85267064019452,7.72858151637278,9.67225062250469,15.9391697154279,47.3034136486973,62.8720946010826,33.4513676175926,13.8237398091031,28.7415370201441,37.4553915576067,29.0972645822428,24.5295369029554,32.5541726928209,24.7117531556577,22.7368429807437,21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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=348378 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28757 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-155bp_to_ENST00000440303,ENST00000517870_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_FAM159A_5end | |||
|id=chr1:53098820..53098860,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.27e-29!140;CL:0002087!1.41e-27!119;CL:0002031!1.51e-21!124;CL:0000037!9.35e-21!172;CL:0000566!9.35e-21!172;CL:0002032!1.03e-19!165;CL:0000837!1.03e-19!165;CL:0000988!9.19e-18!182;CL:0000542!1.15e-17!53;CL:0000051!1.15e-17!53;CL:0000838!4.90e-17!52;CL:0000791!1.51e-16!18;CL:0000789!1.51e-16!18;CL:0002420!1.51e-16!18;CL:0002419!1.51e-16!18;CL:0000790!1.51e-16!18;CL:0000766!1.10e-11!76;CL:0000625!9.72e-11!11;CL:0002057!2.08e-10!42;CL:0000084!1.10e-09!25;CL:0000827!1.10e-09!25;CL:0000236!1.42e-09!14;CL:0002194!3.23e-09!63;CL:0000576!3.23e-09!63;CL:0000040!3.23e-09!63;CL:0000559!3.23e-09!63;CL:0000860!5.02e-09!45;CL:0002009!1.46e-08!65;CL:0000557!6.31e-08!71;CL:0000839!1.59e-07!70;CL:0000945!6.89e-07!24;CL:0000826!6.89e-07!24;CL:0000094!9.41e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.44e-25;18!CL:0000789;2.44e-25;18!CL:0002419;2.44e-25;18!CL:0000542;3.05e-17;53!CL:0000084;1.79e-16;25!CL:0000625;4.05e-16;11!CL:0000236;2.96e-14;13!CL:0002087;8.30e-14;104!CL:0000860;7.49e-11;33!CL:0002057;7.49e-11;33!CL:0000945;9.61e-10;24!CL:0000624;1.12e-09;6!CL:0000094;1.19e-09;8!CL:0000576;1.46e-08;48!CL:0000738;2.29e-08;136!CL:0000473;6.03e-07;39!CL:0000234;6.03e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.71e-40,136;CL:0002087,4.68e-39,115;CL:0000037,4.35e-31,168;CL:0002031,8.81e-31,120;CL:0002032,9.62e-30,161;CL:0000837,9.62e-30,161;CL:0000542,9.33e-29,53;CL:0000051,9.33e-29,53;CL:0000988,2.84e-28,177;CL:0000838,9.74e-28,52;CL:0000791,2.51e-25,18;CL:0000789,2.51e-25,18;CL:0002420,2.51e-25,18;CL:0002419,2.51e-25,18;CL:0000790,2.51e-25,18;CL:0000084,1.82e-16,25;CL:0000827,1.82e-16,25;CL:0000625,4.19e-16,11;CL:0000236,5.22e-15,14;CL:0000766,9.65e-14,72;CL:0000860,3.23e-10,42;CL:0002057,3.23e-10,42;CL:0002194,5.78e-10,59;CL:0000576,5.78e-10,59;CL:0000040,5.78e-10,59;CL:0000559,5.78e-10,59;CL:0000094,8.43e-10,8;CL:0000945,9.21e-10,24;CL:0000826,9.21e-10,24;CL:0000624,1.11e-09,6;CL:0002009,2.14e-09,61;CL:0000473,4.41e-09,48;CL:0000234,4.41e-09,48;CL:0000557,1.05e-08,67;CL:0000839,3.83e-08,66;CL:0000763,6.73e-08,108;CL:0000049,6.73e-08,108 | |||
|ontology_enrichment_development_v019=CL:0000790;2.44e-25;18!CL:0000051;3.05e-17;53!CL:0002057;9.40e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.95e-25!115;UBERON:0002390!4.08e-13!102;UBERON:0003061!4.08e-13!102;UBERON:0002193!3.49e-12!112;UBERON:0001049!9.75e-09!57;UBERON:0005068!9.75e-09!57;UBERON:0006241!9.75e-09!57;UBERON:0007135!9.75e-09!57;UBERON:0000178!7.35e-08!15;UBERON:0000179!7.35e-08!15;UBERON:0000463!7.35e-08!15;UBERON:0002780!5.75e-07!41;UBERON:0001890!5.75e-07!41;UBERON:0006240!5.75e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.44e-12;15!UBERON:0000179;1.44e-12;15!UBERON:0000463;1.44e-12;15!UBERON:0002390;2.34e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.84e-18,98;UBERON:0003061,9.84e-18,98;UBERON:0002193,7.95e-17,108;UBERON:0000178,1.60e-12,15;UBERON:0000179,1.60e-12,15;UBERON:0000463,1.60e-12,15;UBERON:0002405,2.05e-09,93;UBERON:0002371,7.86e-07,76;UBERON:0004177,7.92e-07,7;UBERON:0005057,7.92e-07,7 | |||
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| |||
|short_description=p1@FAM159A | |||
}} |
Revision as of 06:07, 12 September 2013
Short description: | p1@FAM159A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FAM159A_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -155bp_to_ENST00000440303, ENST00000517870_5end |
EntrezGene: | FAM159A |
HGNC: | 28757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.84e-18 | 98 |
blood island | 9.84e-18 | 98 |
hemolymphoid system | 7.95e-17 | 108 |
blood | 1.60e-12 | 15 |
haemolymphatic fluid | 1.60e-12 | 15 |
organism substance | 1.60e-12 | 15 |
immune system | 2.05e-09 | 93 |
bone marrow | 7.86e-07 | 76 |
hemopoietic organ | 7.92e-07 | 7 |
immune organ | 7.92e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.