FFCP PHASE1:Hg19::chr1:22206973..22206987,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C547|description=CAGE_peak_at_chr1:22206973..22206987,-|id=chr1:22206973..22206987,-|ontology_enrichment_celltype=CL:0002139!2.30e-10!24;CL:0000115!2.66e-10!35;CL:0000213!3.35e-09!57;CL:0000215!3.35e-09!57;CL:0002078!3.68e-09!44;CL:0000057!2.59e-08!75;CL:0000222!6.43e-08!119;CL:0002334!7.36e-08!12;CL:0000055!2.02e-07!180|ontology_enrichment_celltype_v019=CL:0000115;3.36e-15;36!CL:0002139;5.36e-14;24!CL:0002078;2.13e-13;45!CL:0002138;5.96e-12;6!CL:0002188;8.16e-09;5!CL:0000213;9.65e-09;58!CL:0000215;9.65e-09;58!CL:0002144;4.03e-07;3|ontology_enrichment_celltype_v019_2=CL:0000115,2.49e-18,36;CL:0002078,1.84e-16,45;CL:0000222,2.80e-14,121;CL:0000213,4.65e-14,58;CL:0000215,4.65e-14,58;CL:0002139,1.27e-13,24;CL:0005020,2.44e-11,6;CL:0002138,2.44e-11,6;CL:0005022,2.44e-11,6;CL:0002188,9.01e-09,5;CL:0002144,4.57e-07,3|ontology_enrichment_development_v019=CL:0005022;5.96e-12;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!1.39e-13!69;UBERON:0002049!5.69e-12!79;UBERON:0007798!5.69e-12!79;UBERON:0004872!1.16e-10!84;UBERON:0001981!3.93e-10!60;UBERON:0007500!3.93e-10!60;UBERON:0004537!3.93e-10!60;UBERON:0006965!3.93e-10!60;UBERON:0001009!6.20e-10!113;UBERON:0004535!7.73e-09!110;UBERON:0001637!6.22e-08!42;UBERON:0003509!6.22e-08!42;UBERON:0004572!6.22e-08!42;UBERON:0003914!7.53e-08!118;UBERON:0004923!6.79e-07!57|ontology_enrichment_uberon_v019=UBERON:0001473;1.35e-13;8!UBERON:0004536;1.35e-13;8!UBERON:0006558;1.35e-13;8!UBERON:0002465;7.88e-11;10!UBERON:0001637;1.93e-09;42!UBERON:0003509;1.93e-09;42!UBERON:0004572;1.93e-09;42!UBERON:0000055;4.37e-09;65!UBERON:0002049;5.49e-09;75!UBERON:0007798;5.49e-09;75!UBERON:0006914;3.00e-08;25!UBERON:0004573;3.69e-07;33!UBERON:0004571;3.69e-07;33!UBERON:0000487;3.76e-07;22!UBERON:0010523;4.03e-07;3!UBERON:0001915;4.03e-07;3!UBERON:0001982;4.03e-07;3!UBERON:0007500;6.96e-07;56!UBERON:0001981;6.96e-07;56!UBERON:0004537;6.96e-07;56|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.37e-19,68;UBERON:0002049,1.66e-16,78;UBERON:0007798,1.66e-16,78;UBERON:0001473,4.42e-13,8;UBERON:0004536,4.42e-13,8;UBERON:0006558,4.42e-13,8;UBERON:0007500,2.51e-12,59;UBERON:0001981,2.51e-12,59;UBERON:0004537,2.51e-12,59;UBERON:0006965,2.51e-12,59;UBERON:0004535,6.96e-12,109;UBERON:0001009,1.92e-11,112;UBERON:0001637,2.89e-11,42;UBERON:0003509,2.89e-11,42;UBERON:0004572,2.89e-11,42;UBERON:0004872,1.42e-10,83;UBERON:0002465,2.01e-10,10;UBERON:0003914,1.39e-08,117;UBERON:0006914,2.83e-08,25;UBERON:0004573,9.59e-08,33;UBERON:0004571,9.59e-08,33;UBERON:0000487,3.50e-07,22;UBERON:0010523,4.57e-07,3;UBERON:0001915,4.57e-07,3;UBERON:0001982,4.57e-07,3;UBERON:0004876,8.60e-07,11|phase1_expression=0.54503513781167,1.71280419112787,0.704772020479856,3.00219895059391,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,1.39560233594486,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,1.34465029290355,1.80808358407193,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0.79504962946682,0,0.694281003215189,0.56530794192401,4.19499436209906,6.87795104850169,0,1.03366703667732,1.06729878806013,1.00416183829401,1.20848795132744,0,4.39311703586705,0,5.67099363517232,0.803697554556718,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.12663051166458,0.529636723252875,2.29469296599051,0.354668382198357,0,0,0,0.311211035399766,1.0776853765575,0.980771418680752,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.741800787835671,0,1.43723628363248,0,0.125118519871964,0,0,0.30648779579902,0,0.226864366320042,0.717558542755448,0.213557388818567,0.635795703478686,0,0.103052529238439,0,0.744467425326359,0.843881661206331,0.292311015483596,0.757301322732344,0.184099797284599,0.323292113637624,2.13005755509969,0.302256294682921,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,1.01056513432752,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.479249710983165,2.29723871668228,0,0.1447813066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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_at_chr1:22206973..22206987,- | |||
|id=chr1:22206973..22206987,- | |||
|ontology_enrichment_celltype=CL:0002139!2.30e-10!24;CL:0000115!2.66e-10!35;CL:0000213!3.35e-09!57;CL:0000215!3.35e-09!57;CL:0002078!3.68e-09!44;CL:0000057!2.59e-08!75;CL:0000222!6.43e-08!119;CL:0002334!7.36e-08!12;CL:0000055!2.02e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.36e-15;36!CL:0002139;5.36e-14;24!CL:0002078;2.13e-13;45!CL:0002138;5.96e-12;6!CL:0002188;8.16e-09;5!CL:0000213;9.65e-09;58!CL:0000215;9.65e-09;58!CL:0002144;4.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.49e-18,36;CL:0002078,1.84e-16,45;CL:0000222,2.80e-14,121;CL:0000213,4.65e-14,58;CL:0000215,4.65e-14,58;CL:0002139,1.27e-13,24;CL:0005020,2.44e-11,6;CL:0002138,2.44e-11,6;CL:0005022,2.44e-11,6;CL:0002188,9.01e-09,5;CL:0002144,4.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;5.96e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.39e-13!69;UBERON:0002049!5.69e-12!79;UBERON:0007798!5.69e-12!79;UBERON:0004872!1.16e-10!84;UBERON:0001981!3.93e-10!60;UBERON:0007500!3.93e-10!60;UBERON:0004537!3.93e-10!60;UBERON:0006965!3.93e-10!60;UBERON:0001009!6.20e-10!113;UBERON:0004535!7.73e-09!110;UBERON:0001637!6.22e-08!42;UBERON:0003509!6.22e-08!42;UBERON:0004572!6.22e-08!42;UBERON:0003914!7.53e-08!118;UBERON:0004923!6.79e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.35e-13;8!UBERON:0004536;1.35e-13;8!UBERON:0006558;1.35e-13;8!UBERON:0002465;7.88e-11;10!UBERON:0001637;1.93e-09;42!UBERON:0003509;1.93e-09;42!UBERON:0004572;1.93e-09;42!UBERON:0000055;4.37e-09;65!UBERON:0002049;5.49e-09;75!UBERON:0007798;5.49e-09;75!UBERON:0006914;3.00e-08;25!UBERON:0004573;3.69e-07;33!UBERON:0004571;3.69e-07;33!UBERON:0000487;3.76e-07;22!UBERON:0010523;4.03e-07;3!UBERON:0001915;4.03e-07;3!UBERON:0001982;4.03e-07;3!UBERON:0007500;6.96e-07;56!UBERON:0001981;6.96e-07;56!UBERON:0004537;6.96e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.37e-19,68;UBERON:0002049,1.66e-16,78;UBERON:0007798,1.66e-16,78;UBERON:0001473,4.42e-13,8;UBERON:0004536,4.42e-13,8;UBERON:0006558,4.42e-13,8;UBERON:0007500,2.51e-12,59;UBERON:0001981,2.51e-12,59;UBERON:0004537,2.51e-12,59;UBERON:0006965,2.51e-12,59;UBERON:0004535,6.96e-12,109;UBERON:0001009,1.92e-11,112;UBERON:0001637,2.89e-11,42;UBERON:0003509,2.89e-11,42;UBERON:0004572,2.89e-11,42;UBERON:0004872,1.42e-10,83;UBERON:0002465,2.01e-10,10;UBERON:0003914,1.39e-08,117;UBERON:0006914,2.83e-08,25;UBERON:0004573,9.59e-08,33;UBERON:0004571,9.59e-08,33;UBERON:0000487,3.50e-07,22;UBERON:0010523,4.57e-07,3;UBERON:0001915,4.57e-07,3;UBERON:0001982,4.57e-07,3;UBERON:0004876,8.60e-07,11 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.704772020479856,3.00219895059391,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,1.39560233594486,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,1.34465029290355,1.80808358407193,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0.79504962946682,0,0.694281003215189,0.56530794192401,4.19499436209906,6.87795104850169,0,1.03366703667732,1.06729878806013,1.00416183829401,1.20848795132744,0,4.39311703586705,0,5.67099363517232,0.803697554556718,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.12663051166458,0.529636723252875,2.29469296599051,0.354668382198357,0,0,0,0.311211035399766,1.0776853765575,0.980771418680752,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0.741800787835671,0,1.43723628363248,0,0.125118519871964,0,0,0.30648779579902,0,0.226864366320042,0.717558542755448,0.213557388818567,0.635795703478686,0,0.103052529238439,0,0.744467425326359,0.843881661206331,0.292311015483596,0.757301322732344,0.184099797284599,0.323292113637624,2.13005755509969,0.302256294682921,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,1.01056513432752,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.479249710983165,2.29723871668228,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28767947683888,1.24900292158013,0.946214490203608,0.585707074963566,0,2.27407504055985,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0.907170879989041,0.744323423456331,0.306923946576125,2.80660094433074,0.640695746278505,1.02341449813341,0.64341568457443,1.48418066444991,0.154209693802656,0.710246901252508,0.0821271560138091,0,0.348631135379878,0.120859449591622,0.40101294060657,0.184161977871793,0,0.546273504020151,0.262248829918848,0,0,0,0,0,1.13733384070897,0,0.215915916102139,6.16909010761157,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0.435050081742686,0.426133137080504,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,1.25924938732256,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0.421258456238981,0,0.487426979262569,0,0,0,0,0,4.64407282668854,1.75380354101505,0,0,0.202910376962704,1.8589409885985,0,0,0,0.7133421029625,0,1.26664581178598,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0.796991953004279,0,0,0,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0.183195186803725,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0.0801588202515337,0.640358984218058,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.599037001496973,0.429226048136571,0.223171457441873,0.134366944973453,0.720599767084807,0,0,0,0.202210631562555,0,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0,0.0788057072991982,0.262272940674991,0,0.537862017998534,0,0.714695326373367,0,0,1.08599920350743,0.864221491201268,0.653174720218818,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0.310874401165561,0,0.159296767163702,0.449803112163605,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0,1.39210127963548,0.796191777397232,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0.14785608621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| |||
|short_description=p@chr1:22206973..22206987,- | |||
}} |
Revision as of 03:47, 12 September 2013
Short description: | p@chr1:22206973..22206987, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:22206973..22206987, - |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.49e-18 | 36 |
meso-epithelial cell | 1.84e-16 | 45 |
mesodermal cell | 2.80e-14 | 121 |
lining cell | 4.65e-14 | 58 |
barrier cell | 4.65e-14 | 58 |
endothelial cell of vascular tree | 1.27e-13 | 24 |
lymphangioblast | 2.44e-11 | 6 |
endothelial cell of lymphatic vessel | 2.44e-11 | 6 |
vascular lymphangioblast | 2.44e-11 | 6 |
glomerular endothelial cell | 9.01e-09 | 5 |
capillary endothelial cell | 4.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.37e-19 | 68 |
vasculature | 1.66e-16 | 78 |
vascular system | 1.66e-16 | 78 |
lymphatic vessel | 4.42e-13 | 8 |
lymph vasculature | 4.42e-13 | 8 |
lymphatic part of lymphoid system | 4.42e-13 | 8 |
epithelial tube open at both ends | 2.51e-12 | 59 |
blood vessel | 2.51e-12 | 59 |
blood vasculature | 2.51e-12 | 59 |
vascular cord | 2.51e-12 | 59 |
cardiovascular system | 6.96e-12 | 109 |
circulatory system | 1.92e-11 | 112 |
artery | 2.89e-11 | 42 |
arterial blood vessel | 2.89e-11 | 42 |
arterial system | 2.89e-11 | 42 |
splanchnic layer of lateral plate mesoderm | 1.42e-10 | 83 |
lymphoid system | 2.01e-10 | 10 |
epithelial tube | 1.39e-08 | 117 |
squamous epithelium | 2.83e-08 | 25 |
systemic artery | 9.59e-08 | 33 |
systemic arterial system | 9.59e-08 | 33 |
simple squamous epithelium | 3.50e-07 | 22 |
microcirculatory vessel | 4.57e-07 | 3 |
endothelium of capillary | 4.57e-07 | 3 |
capillary | 4.57e-07 | 3 |
urogenital ridge | 8.60e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.