FFCP PHASE1:Hg19::chr1:9970199..9970221,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56998|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16913|TSSclassifier=S|UniProt=Q5T4V2,Q9NSA3|association_with_transcript=94bp_to_NM_001012329,NM_020248,uc001aqk.1,uc001aql.1_5end|description=CAGE_peak_3_at_CTNNBIP1_5end|id=chr1:9970199..9970221,-|ontology_enrichment_celltype=CL:0000115!2.77e-11!35;CL:0000222!1.26e-10!119;CL:0002139!1.12e-09!24;CL:0000071!2.44e-08!18;CL:0002546!2.44e-08!18;CL:0002078!2.64e-08!44;CL:0000213!2.77e-08!57;CL:0000215!2.77e-08!57;CL:0000183!4.92e-07!59|ontology_enrichment_celltype_v019=CL:0002139;8.60e-11;24!CL:0000115;9.49e-11;36!CL:0000071;3.16e-10;18!CL:0002078;1.07e-07;45!CL:0000213;6.19e-07;58!CL:0000215;6.19e-07;58|ontology_enrichment_celltype_v019_2=CL:0000115,3.92e-13,36;CL:0002139,6.38e-11,24;CL:0000213,8.55e-11,58;CL:0000215,8.55e-11,58;CL:0000222,8.70e-11,121;CL:0002078,1.36e-10,45;CL:0000071,7.26e-10,18;CL:0002546,7.26e-10,18|ontology_enrichment_development_v019=CL:0002546;3.16e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001009!1.31e-13!113;UBERON:0004535!8.40e-13!110;UBERON:0000055!3.48e-12!69;UBERON:0002049!5.05e-11!79;UBERON:0007798!5.05e-11!79;UBERON:0004872!5.84e-11!84;UBERON:0001981!2.56e-10!60;UBERON:0007500!2.56e-10!60;UBERON:0004537!2.56e-10!60;UBERON:0006965!2.56e-10!60;UBERON:0003081!1.72e-08!216;UBERON:0001986!2.44e-08!18;UBERON:0004638!2.44e-08!18;UBERON:0004852!2.44e-08!18;UBERON:0003914!9.62e-08!118;UBERON:0000926!5.87e-07!448;UBERON:0004120!5.87e-07!448;UBERON:0006603!5.87e-07!448;UBERON:0006914!6.99e-07!25;UBERON:0000487!9.09e-07!22|ontology_enrichment_uberon_v019=UBERON:0004638;3.16e-10;18!UBERON:0001986;3.16e-10;18!UBERON:0004852;3.16e-10;18!UBERON:0006914;6.38e-08;25!UBERON:0000487;7.91e-08;22!UBERON:0007500;7.72e-07;56!UBERON:0001981;7.72e-07;56!UBERON:0004537;7.72e-07;56|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.99e-13,112;UBERON:0000055,1.28e-12,68;UBERON:0004535,3.25e-12,109;UBERON:0007500,1.27e-10,59;UBERON:0001981,1.27e-10,59;UBERON:0004537,1.27e-10,59;UBERON:0006965,1.27e-10,59;UBERON:0002049,1.55e-10,78;UBERON:0007798,1.55e-10,78;UBERON:0004872,2.70e-10,83;UBERON:0004638,7.26e-10,18;UBERON:0001986,7.26e-10,18;UBERON:0004852,7.26e-10,18;UBERON:0003081,9.07e-10,203;UBERON:0003914,2.45e-09,117;UBERON:0000926,4.73e-08,315;UBERON:0004120,4.73e-08,315;UBERON:0006603,4.73e-08,315;UBERON:0006914,8.10e-08,25;UBERON:0000487,9.89e-08,22|phase1_expression=3.45188920614058,0.642301571672949,2.96004248601539,5.00366491765652,2.68176656656373,2.61701557230111,0,0.631719873426831,1.30592814099919,0.982935746006035,2.09340350391728,1.52908960491121,1.31883489114227,1.48519623552056,2.31978163009541,0,0,0.730310090387373,1.95173119516203,1.10808952269109,0.816002764977012,0.940364164434263,0.572471974262113,0.821246550437305,0,0.0764134057479513,0,0.236132343941038,1.18009283054671,0,0.928896739896456,0.919421224478927,2.409647350226,1.10926203050036,0.0774672005803016,0.142169232487422,1.46800219667424,0,1.60435557976113,1.73608696572681,0.223915474239924,2.59114932815184,1.80302897343931,1.59938062657521,0.755751887377619,0.727752183563449,0.929716147622738,0.411167888021826,1.54853185447552,1.1507695692886,0.512321413058201,0.236482229888585,0.689491361473237,1.29096936716765,1.35426486594342,0.941211697713023,0.818718450173537,0,0.306083892370903,1.92557416245656,0,0.659702600373432,0.797854630486527,0.852449501065388,0.870627715885752,0.56738522469114,0,0.251248665256743,1.5644487552606,0.868755378820466,1.81619850790011,0.368277635987565,0.632924774881769,0.422510572623884,0.637812899895131,0.838634582033504,1.57260083605093,1.80212271409808,1.6072558669708,0.285012743741249,0.19891667719909,0,0,1.63841583378639,0,0,1.20118796110804,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,2.80254281490768,0.526768169550154,0.393419540227666,0.393010762749165,0,0.668745981562712,0,0.473447805734733,0,1.22551502573691,0.294605907474837,1.10766947291811,1.08321545506006,1.15282187753108,0.780356085359269,2.13769275984779,1.38175008892924,1.73881851441031,0.14828656316206,0,0,0.679856056185397,0.383220493601921,1.03088233644789,0,0.318565414324097,0.651083453856419,0.950452044448374,0.451725357233318,0.639933055772092,1.24930726552346,0.236777252044017,2.46338399076314,1.00803371612366,0.267440195783507,1.01377082717959,4.87613732627923,3.35350429851818,2.17366355134002,1.80719576192283,2.50668955317945,3.0417768981773,3.1811437882044,2.43317435151318,0.661743720148475,0.221729397462564,0.351339142772504,1.63723844372141,2.91436230634034,2.59549109949101,0.649094787309367,0.174129737299267,0.797747763113191,0.715471872916026,1.14398982156026,0.74291500265913,1.39133685156694,3.4409383804245,1.73570250803797,3.39184765154406,2.09749718104953,1.37559020970034,1.46296476575767,3.87625138753993,1.77883131343355,1.33888245105868,3.62546385398232,4.56163263431108,5.36936526605973,1.1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699929078,1.29485767437579,0.513314034281235,2.3196288626764,1.45713297917742,0.467878926924211,0,0.237840181555137,0.22589216407792,0,0.905777061400041,0.694567422971502,1.09279780251979,2.82190377816914,1.47088993052343,2.12108892391463,0.785233868459781,0.297046400327086,0.4226557275834,1.35941691750254,0.375935671919414,0.902410431630081,0.299823467774787,0.178553938605658,0.705789743431384,0.160482733378337,0,3.66983426723633,0.430018749454354,0.473314686579554,0.883889372481891,0,0.5290268405154,2.60396512716726,3.69740502905135,3.46101249699031,0.378499274505237,0.437062287854782,0.886889507080059,0.305966489225945,0.26721740526556,1.01084389488329,0.250707539292375,2.04602485189246,4.82335434281121,0,0.827463966895162,1.70587185520785,2.61870874610114,0.322944549180031,0.31037357147929,0.560659312903067,0.700118741059814,2.62752345645685,0.870866991587845,1.36893320434112,1.27968900727716,0.78894425931944,1.66330178273007,0.244209805832924,0.213454691755431,3.8614456457388,0.628776414746108,2.34640942403454,1.58913877437726,0.813792356631477,0,0.805095174364105,0.320568492303233|short_description=p3@CTNNBIP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=56998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16913 | |||
|TSSclassifier=S | |||
|UniProt=Q5T4V2,Q9NSA3 | |||
|association_with_transcript=94bp_to_NM_001012329,NM_020248,uc001aqk.1,uc001aql.1_5end | |||
|description=CAGE_peak_3_at_CTNNBIP1_5end | |||
|id=chr1:9970199..9970221,- | |||
|ontology_enrichment_celltype=CL:0000115!2.77e-11!35;CL:0000222!1.26e-10!119;CL:0002139!1.12e-09!24;CL:0000071!2.44e-08!18;CL:0002546!2.44e-08!18;CL:0002078!2.64e-08!44;CL:0000213!2.77e-08!57;CL:0000215!2.77e-08!57;CL:0000183!4.92e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.60e-11;24!CL:0000115;9.49e-11;36!CL:0000071;3.16e-10;18!CL:0002078;1.07e-07;45!CL:0000213;6.19e-07;58!CL:0000215;6.19e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.92e-13,36;CL:0002139,6.38e-11,24;CL:0000213,8.55e-11,58;CL:0000215,8.55e-11,58;CL:0000222,8.70e-11,121;CL:0002078,1.36e-10,45;CL:0000071,7.26e-10,18;CL:0002546,7.26e-10,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.16e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.31e-13!113;UBERON:0004535!8.40e-13!110;UBERON:0000055!3.48e-12!69;UBERON:0002049!5.05e-11!79;UBERON:0007798!5.05e-11!79;UBERON:0004872!5.84e-11!84;UBERON:0001981!2.56e-10!60;UBERON:0007500!2.56e-10!60;UBERON:0004537!2.56e-10!60;UBERON:0006965!2.56e-10!60;UBERON:0003081!1.72e-08!216;UBERON:0001986!2.44e-08!18;UBERON:0004638!2.44e-08!18;UBERON:0004852!2.44e-08!18;UBERON:0003914!9.62e-08!118;UBERON:0000926!5.87e-07!448;UBERON:0004120!5.87e-07!448;UBERON:0006603!5.87e-07!448;UBERON:0006914!6.99e-07!25;UBERON:0000487!9.09e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.16e-10;18!UBERON:0001986;3.16e-10;18!UBERON:0004852;3.16e-10;18!UBERON:0006914;6.38e-08;25!UBERON:0000487;7.91e-08;22!UBERON:0007500;7.72e-07;56!UBERON:0001981;7.72e-07;56!UBERON:0004537;7.72e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.99e-13,112;UBERON:0000055,1.28e-12,68;UBERON:0004535,3.25e-12,109;UBERON:0007500,1.27e-10,59;UBERON:0001981,1.27e-10,59;UBERON:0004537,1.27e-10,59;UBERON:0006965,1.27e-10,59;UBERON:0002049,1.55e-10,78;UBERON:0007798,1.55e-10,78;UBERON:0004872,2.70e-10,83;UBERON:0004638,7.26e-10,18;UBERON:0001986,7.26e-10,18;UBERON:0004852,7.26e-10,18;UBERON:0003081,9.07e-10,203;UBERON:0003914,2.45e-09,117;UBERON:0000926,4.73e-08,315;UBERON:0004120,4.73e-08,315;UBERON:0006603,4.73e-08,315;UBERON:0006914,8.10e-08,25;UBERON:0000487,9.89e-08,22 | |||
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| |||
|short_description=p3@CTNNBIP1 | |||
}} |
Revision as of 07:25, 12 September 2013
Short description: | p3@CTNNBIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CTNNBIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 94bp_to_NM_001012329, NM_020248, uc001aqk.1, uc001aql.1_5end |
EntrezGene: | CTNNBIP1 |
HGNC: | 16913 |
UniProt: | Q5T4V2Q9NSA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.92e-13 | 36 |
endothelial cell of vascular tree | 6.38e-11 | 24 |
lining cell | 8.55e-11 | 58 |
barrier cell | 8.55e-11 | 58 |
mesodermal cell | 8.70e-11 | 121 |
meso-epithelial cell | 1.36e-10 | 45 |
blood vessel endothelial cell | 7.26e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.26e-10 | 18 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 3.99e-13 | 112 |
vessel | 1.28e-12 | 68 |
cardiovascular system | 3.25e-12 | 109 |
epithelial tube open at both ends | 1.27e-10 | 59 |
blood vessel | 1.27e-10 | 59 |
blood vasculature | 1.27e-10 | 59 |
vascular cord | 1.27e-10 | 59 |
vasculature | 1.55e-10 | 78 |
vascular system | 1.55e-10 | 78 |
splanchnic layer of lateral plate mesoderm | 2.70e-10 | 83 |
blood vessel endothelium | 7.26e-10 | 18 |
endothelium | 7.26e-10 | 18 |
cardiovascular system endothelium | 7.26e-10 | 18 |
lateral plate mesoderm | 9.07e-10 | 203 |
epithelial tube | 2.45e-09 | 117 |
mesoderm | 4.73e-08 | 315 |
mesoderm-derived structure | 4.73e-08 | 315 |
presumptive mesoderm | 4.73e-08 | 315 |
squamous epithelium | 8.10e-08 | 25 |
simple squamous epithelium | 9.89e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.