FFCP PHASE1:Hg19::chr1:2985645..2985677,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:2985645..2985677,-|id=chr1:2985645..2985677,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002605;2.64e-10;3!CL:0002586;3.13e-10;3!CL:0000149;9.39e-08;4!CL:0000138;1.21e-07;6!CL:0000047;5.88e-07;2|ontology_enrichment_celltype_v019_2=CL:0002605,2.62e-10,3;CL:0002586,3.14e-10,3;CL:0000149,9.42e-08,4;CL:0000058,1.83e-07,6;CL:0000138,1.83e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;2.69e-07;2|ontology_enrichment_disease_v019_2=DOID:114,3.05e-07,2|ontology_enrichment_uberon=UBERON:0007023!2.81e-36!115;UBERON:0005743!3.01e-30!86;UBERON:0001049!1.69e-27!57;UBERON:0005068!1.69e-27!57;UBERON:0006241!1.69e-27!57;UBERON:0007135!1.69e-27!57;UBERON:0003080!2.12e-27!42;UBERON:0002616!2.84e-27!59;UBERON:0001893!4.25e-27!34;UBERON:0002020!7.73e-27!34;UBERON:0003528!7.73e-27!34;UBERON:0002780!1.18e-26!41;UBERON:0001890!1.18e-26!41;UBERON:0006240!1.18e-26!41;UBERON:0001017!1.55e-26!82;UBERON:0002791!2.66e-26!33;UBERON:0000955!2.96e-26!69;UBERON:0006238!2.96e-26!69;UBERON:0001869!7.18e-26!32;UBERON:0003075!1.23e-25!86;UBERON:0007284!1.23e-25!86;UBERON:0000073!2.48e-25!94;UBERON:0001016!2.48e-25!94;UBERON:0002346!1.38e-23!90;UBERON:0003056!4.75e-21!61;UBERON:0000956!1.86e-20!25;UBERON:0000203!1.86e-20!25;UBERON:0000153!2.74e-19!129;UBERON:0007811!2.74e-19!129;UBERON:0000033!1.17e-18!123;UBERON:0002619!3.05e-17!22;UBERON:0001950!2.57e-15!20;UBERON:0004121!6.19e-14!169;UBERON:0000924!4.17e-13!173;UBERON:0006601!4.17e-13!173;UBERON:0000025!1.11e-10!194;UBERON:0000481!4.46e-10!347;UBERON:0000064!1.09e-08!219;UBERON:0001871!1.26e-08!7;UBERON:0002420!2.49e-08!9;UBERON:0007245!2.49e-08!9;UBERON:0010009!2.49e-08!9;UBERON:0010011!2.49e-08!9;UBERON:0000454!2.49e-08!9;UBERON:0004111!3.80e-08!241;UBERON:0000475!8.35e-08!365;UBERON:0002308!8.39e-08!9;UBERON:0000125!8.39e-08!9;UBERON:0000477!1.57e-07!286|ontology_enrichment_uberon_v019=UBERON:0000956;1.10e-18;25!UBERON:0000203;1.10e-18;25!UBERON:0002791;1.23e-17;32!UBERON:0001869;1.41e-17;32!UBERON:0003528;9.50e-15;34!UBERON:0002020;9.50e-15;34!UBERON:0001893;1.10e-14;34!UBERON:0002619;1.16e-12;22!UBERON:0002780;1.73e-11;41!UBERON:0001890;1.73e-11;41!UBERON:0000966;1.67e-10;5!UBERON:0005388;1.67e-10;5!UBERON:0001802;1.67e-10;5!UBERON:0001781;3.13e-10;3!UBERON:0001782;3.13e-10;3!UBERON:0002114;8.54e-10;2!UBERON:0002108;1.07e-09;4!UBERON:0006947;2.06e-09;3!UBERON:0004054;2.06e-09;3!UBERON:0001950;2.29e-09;20!UBERON:0000073;5.61e-08;53!UBERON:0002616;5.61e-08;53!UBERON:0005904;3.76e-07;4!UBERON:0000058;5.27e-07;10!UBERON:0000341;9.14e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000956,6.16e-19,25;UBERON:0000203,6.16e-19,25;UBERON:0002791,8.49e-19,32;UBERON:0001869,8.49e-19,32;UBERON:0003528,1.73e-17,34;UBERON:0002020,1.73e-17,34;UBERON:0001893,1.73e-17,34;UBERON:0003075,1.51e-15,82;UBERON:0007284,1.51e-15,82;UBERON:0002346,1.56e-14,86;UBERON:0003056,5.41e-14,61;UBERON:0002780,6.73e-14,41;UBERON:0001890,6.73e-14,41;UBERON:0003080,6.73e-14,41;UBERON:0006240,6.73e-14,41;UBERON:0000073,6.08e-13,53;UBERON:0002616,6.08e-13,53;UBERON:0002619,7.08e-13,22;UBERON:0001017,1.75e-12,81;UBERON:0007023,2.15e-12,114;UBERON:0010314,4.42e-12,132;UBERON:0001049,5.02e-12,56;UBERON:0005068,5.02e-12,56;UBERON:0006241,5.02e-12,56;UBERON:0007135,5.02e-12,56;UBERON:0010371,5.96e-11,104;UBERON:0001016,1.06e-10,89;UBERON:0000955,3.11e-10,68;UBERON:0006238,3.11e-10,68;UBERON:0001782,3.14e-10,3;UBERON:0005424,3.14e-10,3;UBERON:0002114,7.51e-10,2;UBERON:0002108,1.08e-09,4;UBERON:0001950,1.70e-09,20;UBERON:0006947,3.23e-09,3;UBERON:0004054,3.23e-09,3;UBERON:0000966,9.46e-09,6;UBERON:0005388,9.46e-09,6;UBERON:0001802,9.46e-09,6;UBERON:0001781,9.42e-08,4;UBERON:0004121,2.00e-07,171;UBERON:0000924,2.00e-07,171;UBERON:0006601,2.00e-07,171;UBERON:0005904,5.24e-07,4;UBERON:0001954,8.65e-07,2;UBERON:0003022,8.65e-07,2;UBERON:0002421,8.65e-07,2;UBERON:0002600,8.65e-07,2|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,4.86601178122796,4.37998160233229,5.39833350257652,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,1.01392563272577,0,0.973269740605272,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,1.14734648299525,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0.250237039743928,0,0,0.612975591598039,0.150238058906597,0,0,0,0,0,0,0,0,0.843881661206331,0.974370051611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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:2985645..2985677,- | |||
|id=chr1:2985645..2985677,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.64e-10;3!CL:0002586;3.13e-10;3!CL:0000149;9.39e-08;4!CL:0000138;1.21e-07;6!CL:0000047;5.88e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.62e-10,3;CL:0002586,3.14e-10,3;CL:0000149,9.42e-08,4;CL:0000058,1.83e-07,6;CL:0000138,1.83e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.05e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.81e-36!115;UBERON:0005743!3.01e-30!86;UBERON:0001049!1.69e-27!57;UBERON:0005068!1.69e-27!57;UBERON:0006241!1.69e-27!57;UBERON:0007135!1.69e-27!57;UBERON:0003080!2.12e-27!42;UBERON:0002616!2.84e-27!59;UBERON:0001893!4.25e-27!34;UBERON:0002020!7.73e-27!34;UBERON:0003528!7.73e-27!34;UBERON:0002780!1.18e-26!41;UBERON:0001890!1.18e-26!41;UBERON:0006240!1.18e-26!41;UBERON:0001017!1.55e-26!82;UBERON:0002791!2.66e-26!33;UBERON:0000955!2.96e-26!69;UBERON:0006238!2.96e-26!69;UBERON:0001869!7.18e-26!32;UBERON:0003075!1.23e-25!86;UBERON:0007284!1.23e-25!86;UBERON:0000073!2.48e-25!94;UBERON:0001016!2.48e-25!94;UBERON:0002346!1.38e-23!90;UBERON:0003056!4.75e-21!61;UBERON:0000956!1.86e-20!25;UBERON:0000203!1.86e-20!25;UBERON:0000153!2.74e-19!129;UBERON:0007811!2.74e-19!129;UBERON:0000033!1.17e-18!123;UBERON:0002619!3.05e-17!22;UBERON:0001950!2.57e-15!20;UBERON:0004121!6.19e-14!169;UBERON:0000924!4.17e-13!173;UBERON:0006601!4.17e-13!173;UBERON:0000025!1.11e-10!194;UBERON:0000481!4.46e-10!347;UBERON:0000064!1.09e-08!219;UBERON:0001871!1.26e-08!7;UBERON:0002420!2.49e-08!9;UBERON:0007245!2.49e-08!9;UBERON:0010009!2.49e-08!9;UBERON:0010011!2.49e-08!9;UBERON:0000454!2.49e-08!9;UBERON:0004111!3.80e-08!241;UBERON:0000475!8.35e-08!365;UBERON:0002308!8.39e-08!9;UBERON:0000125!8.39e-08!9;UBERON:0000477!1.57e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.10e-18;25!UBERON:0000203;1.10e-18;25!UBERON:0002791;1.23e-17;32!UBERON:0001869;1.41e-17;32!UBERON:0003528;9.50e-15;34!UBERON:0002020;9.50e-15;34!UBERON:0001893;1.10e-14;34!UBERON:0002619;1.16e-12;22!UBERON:0002780;1.73e-11;41!UBERON:0001890;1.73e-11;41!UBERON:0000966;1.67e-10;5!UBERON:0005388;1.67e-10;5!UBERON:0001802;1.67e-10;5!UBERON:0001781;3.13e-10;3!UBERON:0001782;3.13e-10;3!UBERON:0002114;8.54e-10;2!UBERON:0002108;1.07e-09;4!UBERON:0006947;2.06e-09;3!UBERON:0004054;2.06e-09;3!UBERON:0001950;2.29e-09;20!UBERON:0000073;5.61e-08;53!UBERON:0002616;5.61e-08;53!UBERON:0005904;3.76e-07;4!UBERON:0000058;5.27e-07;10!UBERON:0000341;9.14e-07;2 | |||
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| |||
|short_description=p@chr1:2985645..2985677,- | |||
}} |
Revision as of 05:11, 12 September 2013
Short description: | p@chr1:2985645..2985677, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:2985645..2985677, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.62e-10 | 3 |
retinal pigment epithelial cell | 3.14e-10 | 3 |
visual pigment cell | 9.42e-08 | 4 |
chondroblast | 1.83e-07 | 6 |
chondrocyte | 1.83e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.05e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.