FFCP PHASE1:Hg19::chr1:111770265..111770275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1117 | |EntrezGene=1117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1933 | |HGNC=1933 | ||
|TSSclassifier=S | |||
|UniProt=Q15782,A6NNY3 | |UniProt=Q15782,A6NNY3 | ||
|association_with_transcript=-5bp_to_ENST00000369748,NM_001025197,NM_004000,uc001eam.2,uc001ean.2_5end | |association_with_transcript=-5bp_to_ENST00000369748,NM_001025197,NM_004000,uc001eam.2,uc001ean.2_5end |
Revision as of 19:12, 5 July 2013
Short description: | p10@CHI3L2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CHI3L2_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | -5bp_to_ENST00000369748, NM_001025197, NM_004000, uc001eam.2, uc001ean.2_5end |
EntrezGene: | CHI3L2 |
HGNC: | 1933 |
UniProt: | Q15782A6NNY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@CHI3L2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.87e-28 | 6 |
chondrocyte | 3.87e-28 | 6 |
subcutaneous fat cell | 5.81e-21 | 3 |
GAG secreting cell | 1.00e-18 | 9 |
carbohydrate secreting cell | 1.00e-18 | 9 |
fat cell | 1.60e-15 | 15 |
annulus pulposus cell | 1.57e-14 | 2 |
extracellular matrix secreting cell | 3.65e-11 | 15 |
mesenchymal stem cell of the bone marrow | 1.14e-10 | 6 |
nucleus pulposus cell of intervertebral disc | 7.18e-10 | 3 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 9.96e-22 | 5 |
symphysis | 9.96e-22 | 5 |
nonsynovial joint | 9.96e-22 | 5 |
fibrous joint | 9.96e-22 | 5 |
cartilaginous joint | 9.96e-22 | 5 |
developing mesenchymal condensation | 9.96e-22 | 5 |
pre-cartilage condensation | 9.96e-22 | 5 |
cartilaginous condensation | 9.96e-22 | 5 |
cartilage element | 9.96e-22 | 5 |
post-cranial axial skeletal system | 9.96e-22 | 5 |
Showing 1 to 10 of 52 entries
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.52e-08 | 1 |
monogenic disease | 2.52e-08 | 1 |
xeroderma pigmentosum | 2.52e-08 | 1 |
Showing 1 to 3 of 3 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.