FFCP PHASE1:Hg19::chr12:8045012..8045024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |EntrezGene=404635 | ||
|HGNC=NA | |HGNC=NA | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description= | |description=CAGE_peak_4_at_NANOGP1_5end | ||
|id=chr12:8045012..8045024,+ | |id=chr12:8045012..8045024,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.98e-45!5;CL:0000039!2.21e-33!7;CL:0000586!2.21e-33!7;CL:0000540!8.29e-22!6;CL:0000031!8.29e-22!6;CL:0000404!8.29e-22!6;CL:0000047!1.57e-16!8 | |ontology_enrichment_celltype=CL:0002322!4.98e-45!5;CL:0000039!2.21e-33!7;CL:0000586!2.21e-33!7;CL:0000540!8.29e-22!6;CL:0000031!8.29e-22!6;CL:0000404!8.29e-22!6;CL:0000047!1.57e-16!8 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.74e-79,8;UBERON:0003135,8.62e-58,11;UBERON:0000991,9.67e-31,21;UBERON:0009196,9.67e-31,21;UBERON:0009117,9.67e-31,21;UBERON:0005564,9.67e-31,21;UBERON:0004176,2.19e-29,22;UBERON:0003101,2.19e-29,22;UBERON:0000079,2.19e-29,22;UBERON:0002323,1.76e-14,46;UBERON:0003133,6.59e-14,48;UBERON:0004458,1.22e-13,49;UBERON:0003886,1.93e-12,54;UBERON:0005156,1.91e-11,59;UBERON:0000990,1.91e-11,59;UBERON:0002553,4.30e-11,61 | |ontology_enrichment_uberon_v019_2=UBERON:0000473,4.74e-79,8;UBERON:0003135,8.62e-58,11;UBERON:0000991,9.67e-31,21;UBERON:0009196,9.67e-31,21;UBERON:0009117,9.67e-31,21;UBERON:0005564,9.67e-31,21;UBERON:0004176,2.19e-29,22;UBERON:0003101,2.19e-29,22;UBERON:0000079,2.19e-29,22;UBERON:0002323,1.76e-14,46;UBERON:0003133,6.59e-14,48;UBERON:0004458,1.22e-13,49;UBERON:0003886,1.93e-12,54;UBERON:0005156,1.91e-11,59;UBERON:0000990,1.91e-11,59;UBERON:0002553,4.30e-11,61 | ||
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|short_description= | |short_description=p4@NANOGP1 | ||
}} | }} |
Revision as of 20:01, 22 November 2012
Short description: | p4@NANOGP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NANOGP1_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NANOGP1 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.52e-90 | 7 |
germ cell | 3.52e-90 | 7 |
embryonic stem cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 4.74e-79 | 8 |
male reproductive organ | 8.62e-58 | 11 |
gonad | 9.67e-31 | 21 |
indifferent external genitalia | 9.67e-31 | 21 |
indifferent gonad | 9.67e-31 | 21 |
gonad primordium | 9.67e-31 | 21 |
external genitalia | 2.19e-29 | 22 |
male organism | 2.19e-29 | 22 |
male reproductive system | 2.19e-29 | 22 |
body cavity | 1.76e-14 | 46 |
reproductive organ | 6.59e-14 | 48 |
body cavity or lining | 1.22e-13 | 49 |
body cavity precursor | 1.93e-12 | 54 |
reproductive structure | 1.91e-11 | 59 |
reproductive system | 1.91e-11 | 59 |
anatomical cavity | 4.30e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.19e-29 | 22 |
germ cell cancer | 2.19e-29 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.