FFCP PHASE1:Mm9::chr12:86827179..86827199,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=137|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:86827179..86827199,+|id=chr12:86827179..86827199,+|ontology_enrichment_celltype=CL:0000063!4.96e-16!66;CL:0000144!3.42e-14!121;CL:0000012!3.42e-14!121;CL:0002371!1.15e-12!118;CL:0000548!6.97e-11!115;CL:0000004!6.97e-11!115;CL:0000255!6.97e-11!115;CL:0002563!1.16e-09!9;CL:0002251!1.16e-09!9;CL:0000066!2.12e-09!25;CL:0000034!3.10e-09!97;CL:0000219!1.65e-08!54;CL:0002320!1.72e-08!46;CL:0000134!1.72e-08!46;CL:0000723!8.41e-08!91;CL:0000048!8.41e-08!91;CL:0000075!1.08e-07!7;CL:0000223!3.60e-07!20;CL:0000239!8.09e-07!6;CL:0000677!8.09e-07!6;CL:0000212!8.09e-07!6;CL:0000584!8.09e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,6.75e-26,9;CL:0002251,6.75e-26,9;CL:0000066,1.16e-22,25;CL:0000075,1.02e-18,7;CL:0000223,3.52e-17,20;CL:0000239,1.57e-15,6;CL:0000677,1.57e-15,6;CL:0000584,1.57e-15,6;CL:0002076,4.52e-15,15;CL:0002250,3.50e-12,3;CL:0000197,3.49e-08,2;CL:0002491,3.49e-08,2;CL:0000098,3.49e-08,2;CL:0000708,1.38e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.71e-11,3;DOID:4045,1.71e-11,3|ontology_enrichment_uberon=UBERON:0000485!1.94e-11!11;UBERON:0000344!8.45e-10!15;UBERON:0003350!1.16e-09!9;UBERON:0004808!1.16e-09!9;UBERON:0001277!1.16e-09!9;UBERON:0001242!1.59e-08!13;UBERON:0000060!1.59e-08!13;UBERON:0001262!1.59e-08!13;UBERON:0004786!1.59e-08!13;UBERON:0002384!1.72e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.65e-32,11;UBERON:0003350,6.75e-26,9;UBERON:0004808,6.75e-26,9;UBERON:0001277,6.75e-26,9;UBERON:0001242,1.43e-17,13;UBERON:0001262,1.43e-17,13;UBERON:0004786,1.43e-17,13;UBERON:0000344,4.52e-15,15;UBERON:0000490,7.84e-10,66;UBERON:0004923,5.73e-09,24;UBERON:0004766,3.49e-08,2;UBERON:0008193,3.49e-08,2;UBERON:0005913,3.49e-08,2;UBERON:0011158,3.49e-08,2;UBERON:0005744,3.49e-08,2;UBERON:0003457,3.49e-08,2;UBERON:0008001,3.49e-08,2;UBERON:0007497,3.49e-08,2;UBERON:0009955,3.49e-08,2;UBERON:0003067,3.49e-08,2;UBERON:0002546,3.49e-08,2;UBERON:0007914,3.49e-08,2;UBERON:0005253,3.49e-08,2;UBERON:0002227,3.49e-08,2;UBERON:0001846,3.49e-08,2;UBERON:0004339,3.49e-08,2;UBERON:0002105,3.49e-08,2;UBERON:0001678,3.49e-08,2;UBERON:0003128,3.49e-08,2;UBERON:0001694,3.49e-08,2;UBERON:0004681,3.49e-08,2;UBERON:0001839,3.49e-08,2;UBERON:0001690,3.49e-08,2;UBERON:0001844,3.49e-08,2;UBERON:0001849,3.49e-08,2;UBERON:0002499,3.49e-08,2;UBERON:0001855,3.49e-08,2;UBERON:0011137,3.49e-08,2;UBERON:0001703,3.49e-08,2;UBERON:0010323,3.49e-08,2;UBERON:0003129,3.49e-08,2;UBERON:0003069,3.49e-08,2;UBERON:0003051,3.49e-08,2;UBERON:0004637,3.49e-08,2;UBERON:0004761,3.49e-08,2;UBERON:0010113,3.49e-08,2;UBERON:0009123,3.49e-08,2;UBERON:0010351,3.49e-08,2;UBERON:0009617,3.49e-08,2;UBERON:0005641,3.49e-08,2;UBERON:0010349,3.49e-08,2;UBERON:0007524,4.47e-08,11;UBERON:0003077,4.47e-08,11;UBERON:0007285,4.47e-08,11;UBERON:0003210,1.38e-07,2|phase1_expression=2.40223270657191,2.79180326111489,1.81999695755814,3.0246421130683,6.01074875935617,3.52546471014969,0.700837921786577,0.516493293766305,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.342401459862411,0.699363219351979,0,0.202475267389826,0,0.630924330716475,0.411343300817216,0.84877930359606,0.0850432901510698,0.0992909512008853,0.522399578277871,0.47997726838022,0.68822784320151,0,0.86152399231815,1.07735616342945,0.380046838912748,0,0.886922042621219,0,0,0,3.17736781726402,3.98963148860382,3.87921776898501,2.92972141515835,2.3440060335714,2.09409497589519,29.4115744015507,4.09827290975067,0.971020706062307,0,0,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0,1.0165335962074,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.604572480854284,13.6236309689789,0,1.3599426674155,0,0,0.448026887097336,0,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,1.79970819298022,0.635351135365324,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0.646703978798527,0,0.175951124163949,0.657587197282725,0,0.348252166522167,0,0.199034266818493,1.40442637462647,0.51469581422943,0.568326998791185,0.621377317606506,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0.167506257441816,0,0.390267295715598,0,0,0.318909537314974,0.163863314715738,0,0,0,1.08781136763742,0,0,0.160550589987792,0.117211686592203,0,0,0,0.780877488593277,0.215423397732799,0.955875191810208,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.42366414172764,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0.339956859987711,1.11961161858926,0.414599921413271,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,1.02860775715625,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0|short_description=p@chr12:86827179..86827199,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=137 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:86827179..86827199,+ | |||
|id=chr12:86827179..86827199,+ | |||
|ontology_enrichment_celltype=CL:0000063!4.96e-16!66;CL:0000144!3.42e-14!121;CL:0000012!3.42e-14!121;CL:0002371!1.15e-12!118;CL:0000548!6.97e-11!115;CL:0000004!6.97e-11!115;CL:0000255!6.97e-11!115;CL:0002563!1.16e-09!9;CL:0002251!1.16e-09!9;CL:0000066!2.12e-09!25;CL:0000034!3.10e-09!97;CL:0000219!1.65e-08!54;CL:0002320!1.72e-08!46;CL:0000134!1.72e-08!46;CL:0000723!8.41e-08!91;CL:0000048!8.41e-08!91;CL:0000075!1.08e-07!7;CL:0000223!3.60e-07!20;CL:0000239!8.09e-07!6;CL:0000677!8.09e-07!6;CL:0000212!8.09e-07!6;CL:0000584!8.09e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.75e-26,9;CL:0002251,6.75e-26,9;CL:0000066,1.16e-22,25;CL:0000075,1.02e-18,7;CL:0000223,3.52e-17,20;CL:0000239,1.57e-15,6;CL:0000677,1.57e-15,6;CL:0000584,1.57e-15,6;CL:0002076,4.52e-15,15;CL:0002250,3.50e-12,3;CL:0000197,3.49e-08,2;CL:0002491,3.49e-08,2;CL:0000098,3.49e-08,2;CL:0000708,1.38e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.71e-11,3;DOID:4045,1.71e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0000485!1.94e-11!11;UBERON:0000344!8.45e-10!15;UBERON:0003350!1.16e-09!9;UBERON:0004808!1.16e-09!9;UBERON:0001277!1.16e-09!9;UBERON:0001242!1.59e-08!13;UBERON:0000060!1.59e-08!13;UBERON:0001262!1.59e-08!13;UBERON:0004786!1.59e-08!13;UBERON:0002384!1.72e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.65e-32,11;UBERON:0003350,6.75e-26,9;UBERON:0004808,6.75e-26,9;UBERON:0001277,6.75e-26,9;UBERON:0001242,1.43e-17,13;UBERON:0001262,1.43e-17,13;UBERON:0004786,1.43e-17,13;UBERON:0000344,4.52e-15,15;UBERON:0000490,7.84e-10,66;UBERON:0004923,5.73e-09,24;UBERON:0004766,3.49e-08,2;UBERON:0008193,3.49e-08,2;UBERON:0005913,3.49e-08,2;UBERON:0011158,3.49e-08,2;UBERON:0005744,3.49e-08,2;UBERON:0003457,3.49e-08,2;UBERON:0008001,3.49e-08,2;UBERON:0007497,3.49e-08,2;UBERON:0009955,3.49e-08,2;UBERON:0003067,3.49e-08,2;UBERON:0002546,3.49e-08,2;UBERON:0007914,3.49e-08,2;UBERON:0005253,3.49e-08,2;UBERON:0002227,3.49e-08,2;UBERON:0001846,3.49e-08,2;UBERON:0004339,3.49e-08,2;UBERON:0002105,3.49e-08,2;UBERON:0001678,3.49e-08,2;UBERON:0003128,3.49e-08,2;UBERON:0001694,3.49e-08,2;UBERON:0004681,3.49e-08,2;UBERON:0001839,3.49e-08,2;UBERON:0001690,3.49e-08,2;UBERON:0001844,3.49e-08,2;UBERON:0001849,3.49e-08,2;UBERON:0002499,3.49e-08,2;UBERON:0001855,3.49e-08,2;UBERON:0011137,3.49e-08,2;UBERON:0001703,3.49e-08,2;UBERON:0010323,3.49e-08,2;UBERON:0003129,3.49e-08,2;UBERON:0003069,3.49e-08,2;UBERON:0003051,3.49e-08,2;UBERON:0004637,3.49e-08,2;UBERON:0004761,3.49e-08,2;UBERON:0010113,3.49e-08,2;UBERON:0009123,3.49e-08,2;UBERON:0010351,3.49e-08,2;UBERON:0009617,3.49e-08,2;UBERON:0005641,3.49e-08,2;UBERON:0010349,3.49e-08,2;UBERON:0007524,4.47e-08,11;UBERON:0003077,4.47e-08,11;UBERON:0007285,4.47e-08,11;UBERON:0003210,1.38e-07,2 | |||
|phase1_expression=2.40223270657191,2.79180326111489,1.81999695755814,3.0246421130683,6.01074875935617,3.52546471014969,0.700837921786577,0.516493293766305,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.342401459862411,0.699363219351979,0,0.202475267389826,0,0.630924330716475,0.411343300817216,0.84877930359606,0.0850432901510698,0.0992909512008853,0.522399578277871,0.47997726838022,0.68822784320151,0,0.86152399231815,1.07735616342945,0.380046838912748,0,0.886922042621219,0,0,0,3.17736781726402,3.98963148860382,3.87921776898501,2.92972141515835,2.3440060335714,2.09409497589519,29.4115744015507,4.09827290975067,0.971020706062307,0,0,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0,1.0165335962074,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.604572480854284,13.6236309689789,0,1.3599426674155,0,0,0.448026887097336,0,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,1.79970819298022,0.635351135365324,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0.646703978798527,0,0.175951124163949,0.657587197282725,0,0.348252166522167,0,0.199034266818493,1.40442637462647,0.51469581422943,0.568326998791185,0.621377317606506,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0.167506257441816,0,0.390267295715598,0,0,0.318909537314974,0.163863314715738,0,0,0,1.08781136763742,0,0,0.160550589987792,0.117211686592203,0,0,0,0.780877488593277,0.215423397732799,0.955875191810208,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.42366414172764,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0.339956859987711,1.11961161858926,0.414599921413271,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,1.02860775715625,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr12:86827179..86827199,+ | |||
}} |
Revision as of 23:31, 12 September 2013
Short description: | p@chr12:86827179..86827199, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:86827179..86827199, + |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.75e-26 | 9 |
epithelial cell of alimentary canal | 6.75e-26 | 9 |
epithelial cell | 1.16e-22 | 25 |
columnar/cuboidal epithelial cell | 1.02e-18 | 7 |
endodermal cell | 3.52e-17 | 20 |
brush border epithelial cell | 1.57e-15 | 6 |
gut absorptive cell | 1.57e-15 | 6 |
enterocyte | 1.57e-15 | 6 |
endo-epithelial cell | 4.52e-15 | 15 |
intestinal crypt stem cell | 3.50e-12 | 3 |
receptor cell | 3.49e-08 | 2 |
auditory epithelial cell | 3.49e-08 | 2 |
sensory epithelial cell | 3.49e-08 | 2 |
leptomeningeal cell | 1.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.71e-11 | 3 |
muscle cancer | 1.71e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.