FFCP PHASE1:Mm9::chr12:112512866..112512894,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=93835|HGNC=|MCL_coexpression_id=803|UniProt=|association_with_transcript=0bp_to_uc007pcq.1_5end|description=CAGE_peak_2_at_Amn_5end|id=chr12:112512866..112512894,+|ontology_enrichment_celltype=CL:0000117!6.72e-13!23;CL:0000337!6.72e-13!23;CL:0000540!5.37e-08!33;CL:0000047!5.37e-08!33;CL:0000031!5.37e-08!33;CL:0000404!5.37e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-21,23;CL:0000337,1.23e-21,23;CL:0000540,3.86e-14,33;CL:0000047,3.86e-14,33;CL:0000031,3.86e-14,33;CL:0000404,3.86e-14,33;CL:0000393,1.71e-11,39;CL:0000211,1.71e-11,39;CL:0002319,3.84e-10,43;CL:0002612,6.21e-10,3;CL:0000221,7.65e-10,44;CL:0000133,7.65e-10,44;CL:0002610,1.77e-09,3;CL:0002614,5.94e-09,3;CL:0002611,2.63e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.51e-19!34;UBERON:0001049!3.00e-18!52;UBERON:0005068!3.00e-18!52;UBERON:0006241!3.00e-18!52;UBERON:0007135!3.00e-18!52;UBERON:0001017!8.37e-18!73;UBERON:0005743!8.37e-18!73;UBERON:0000073!6.47e-17!75;UBERON:0001016!6.47e-17!75;UBERON:0000955!2.80e-16!50;UBERON:0006238!2.80e-16!50;UBERON:0002616!1.55e-15!49;UBERON:0002791!5.14e-14!29;UBERON:0003528!5.14e-14!29;UBERON:0001893!5.14e-14!29;UBERON:0003080!1.05e-13!40;UBERON:0002780!7.08e-13!39;UBERON:0001890!7.08e-13!39;UBERON:0006240!7.08e-13!39;UBERON:0002346!5.01e-12!71;UBERON:0003075!5.01e-12!71;UBERON:0007284!5.01e-12!71;UBERON:0000033!6.64e-12!63;UBERON:0002021!3.59e-11!10;UBERON:0000411!3.59e-11!10;UBERON:0001950!3.59e-11!10;UBERON:0003056!6.45e-11!49;UBERON:0004121!3.37e-10!102;UBERON:0000924!3.37e-10!102;UBERON:0006601!3.37e-10!102;UBERON:0002619!5.02e-09!17;UBERON:0007811!8.67e-09!86;UBERON:0002420!2.55e-08!8;UBERON:0007245!2.55e-08!8;UBERON:0010009!2.55e-08!8;UBERON:0010011!2.55e-08!8;UBERON:0000454!2.55e-08!8;UBERON:0000956!8.85e-08!21;UBERON:0001869!8.85e-08!21;UBERON:0000203!8.85e-08!21;UBERON:0002240!9.82e-08!6;UBERON:0005174!9.82e-08!6;UBERON:0001137!9.82e-08!6;UBERON:0001948!4.66e-07!5;UBERON:0002315!4.66e-07!5;UBERON:0000153!4.75e-07!94;UBERON:0002298!5.88e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.75e-38,54;UBERON:0002020,1.09e-35,34;UBERON:0001017,2.97e-31,73;UBERON:0001049,3.21e-31,52;UBERON:0005068,3.21e-31,52;UBERON:0006241,3.21e-31,52;UBERON:0007135,3.21e-31,52;UBERON:0001016,2.90e-30,75;UBERON:0002021,4.13e-26,10;UBERON:0000411,4.13e-26,10;UBERON:0001950,4.13e-26,10;UBERON:0002346,2.39e-24,64;UBERON:0003075,2.39e-24,64;UBERON:0007284,2.39e-24,64;UBERON:0003528,1.19e-23,29;UBERON:0002791,1.19e-23,29;UBERON:0001893,1.19e-23,29;UBERON:0003080,5.04e-23,40;UBERON:0004121,1.18e-22,95;UBERON:0000924,1.18e-22,95;UBERON:0006601,1.18e-22,95;UBERON:0002616,1.36e-21,46;UBERON:0002780,3.66e-21,39;UBERON:0001890,3.66e-21,39;UBERON:0006240,3.66e-21,39;UBERON:0000955,4.91e-21,47;UBERON:0006238,4.91e-21,47;UBERON:0010371,1.13e-20,73;UBERON:0003056,5.48e-18,49;UBERON:0002619,1.62e-17,17;UBERON:0000956,2.07e-16,21;UBERON:0001869,2.07e-16,21;UBERON:0000203,2.07e-16,21;UBERON:0001948,1.32e-15,5;UBERON:0002315,1.32e-15,5;UBERON:0010314,2.86e-15,92;UBERON:0002240,6.12e-13,6;UBERON:0005174,6.12e-13,6;UBERON:0001137,6.12e-13,6;UBERON:0002950,2.19e-11,4;UBERON:0001891,2.19e-11,4;UBERON:0009616,2.19e-11,4;UBERON:0010286,2.19e-11,4;UBERON:0000025,2.93e-11,114;UBERON:0004111,3.70e-10,122;UBERON:0002257,6.21e-10,3;UBERON:0004684,1.77e-09,3;UBERON:0002275,1.77e-09,3;UBERON:0002038,5.94e-09,3;UBERON:0009663,5.94e-09,3;UBERON:0009661,5.94e-09,3;UBERON:0000125,5.94e-09,3;UBERON:0002308,5.94e-09,3;UBERON:0003076,1.71e-08,12;UBERON:0003057,1.71e-08,12;UBERON:0002420,2.25e-08,8;UBERON:0007245,2.25e-08,8;UBERON:0010009,2.25e-08,8;UBERON:0010011,2.25e-08,8;UBERON:0000454,2.25e-08,8;UBERON:0011216,5.55e-08,194;UBERON:0002256,2.63e-07,2|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0,0,11.9973413449598,13.9147180799517,0.367472397644862,0,0,5.50579404996943,2.042997409363,3.84016333140609,1.31886287730194,0.731901148819277,0.52091337055676,2.51264699101243,2.8138130501584,1.5279824777681,16.7938293719991,9.11178757114259,2.98239113320481,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,0.457500602818626,2.26177833803156,1.56441888173049,2.04572365864264,2.28566849015516,1.1356888414743,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.514523061896422,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777804753376191,0.516639293910924,0.506868376472335,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0,0,0,0,0.167884616364078,0.19318959403219,0.375364950902364,0,0,0,3.3885110557024,1.84130094602871,3.43737308063638,4.29632955859219,2.74033007908257,1.5107877947794,2.70009000092722,1.80128481289688,1.81256963593682,1.03552062350364,0,0,0,0.243106717068294,0.419226325255965,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.50695859978048,0.565879024158229,0.280924522409647,0.192075457214608,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,1.02860775715625,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.474540072496697,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0.441182838239031,0|short_description=p2@Amn}} | ||
|EntrezGene=93835 | |||
|HGNC= | |||
|MCL_coexpression_id=803 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc007pcq.1_5end | |||
|description=CAGE_peak_2_at_Amn_5end | |||
|id=chr12:112512866..112512894,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.72e-13!23;CL:0000337!6.72e-13!23;CL:0000540!5.37e-08!33;CL:0000047!5.37e-08!33;CL:0000031!5.37e-08!33;CL:0000404!5.37e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-21,23;CL:0000337,1.23e-21,23;CL:0000540,3.86e-14,33;CL:0000047,3.86e-14,33;CL:0000031,3.86e-14,33;CL:0000404,3.86e-14,33;CL:0000393,1.71e-11,39;CL:0000211,1.71e-11,39;CL:0002319,3.84e-10,43;CL:0002612,6.21e-10,3;CL:0000221,7.65e-10,44;CL:0000133,7.65e-10,44;CL:0002610,1.77e-09,3;CL:0002614,5.94e-09,3;CL:0002611,2.63e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.51e-19!34;UBERON:0001049!3.00e-18!52;UBERON:0005068!3.00e-18!52;UBERON:0006241!3.00e-18!52;UBERON:0007135!3.00e-18!52;UBERON:0001017!8.37e-18!73;UBERON:0005743!8.37e-18!73;UBERON:0000073!6.47e-17!75;UBERON:0001016!6.47e-17!75;UBERON:0000955!2.80e-16!50;UBERON:0006238!2.80e-16!50;UBERON:0002616!1.55e-15!49;UBERON:0002791!5.14e-14!29;UBERON:0003528!5.14e-14!29;UBERON:0001893!5.14e-14!29;UBERON:0003080!1.05e-13!40;UBERON:0002780!7.08e-13!39;UBERON:0001890!7.08e-13!39;UBERON:0006240!7.08e-13!39;UBERON:0002346!5.01e-12!71;UBERON:0003075!5.01e-12!71;UBERON:0007284!5.01e-12!71;UBERON:0000033!6.64e-12!63;UBERON:0002021!3.59e-11!10;UBERON:0000411!3.59e-11!10;UBERON:0001950!3.59e-11!10;UBERON:0003056!6.45e-11!49;UBERON:0004121!3.37e-10!102;UBERON:0000924!3.37e-10!102;UBERON:0006601!3.37e-10!102;UBERON:0002619!5.02e-09!17;UBERON:0007811!8.67e-09!86;UBERON:0002420!2.55e-08!8;UBERON:0007245!2.55e-08!8;UBERON:0010009!2.55e-08!8;UBERON:0010011!2.55e-08!8;UBERON:0000454!2.55e-08!8;UBERON:0000956!8.85e-08!21;UBERON:0001869!8.85e-08!21;UBERON:0000203!8.85e-08!21;UBERON:0002240!9.82e-08!6;UBERON:0005174!9.82e-08!6;UBERON:0001137!9.82e-08!6;UBERON:0001948!4.66e-07!5;UBERON:0002315!4.66e-07!5;UBERON:0000153!4.75e-07!94;UBERON:0002298!5.88e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.75e-38,54;UBERON:0002020,1.09e-35,34;UBERON:0001017,2.97e-31,73;UBERON:0001049,3.21e-31,52;UBERON:0005068,3.21e-31,52;UBERON:0006241,3.21e-31,52;UBERON:0007135,3.21e-31,52;UBERON:0001016,2.90e-30,75;UBERON:0002021,4.13e-26,10;UBERON:0000411,4.13e-26,10;UBERON:0001950,4.13e-26,10;UBERON:0002346,2.39e-24,64;UBERON:0003075,2.39e-24,64;UBERON:0007284,2.39e-24,64;UBERON:0003528,1.19e-23,29;UBERON:0002791,1.19e-23,29;UBERON:0001893,1.19e-23,29;UBERON:0003080,5.04e-23,40;UBERON:0004121,1.18e-22,95;UBERON:0000924,1.18e-22,95;UBERON:0006601,1.18e-22,95;UBERON:0002616,1.36e-21,46;UBERON:0002780,3.66e-21,39;UBERON:0001890,3.66e-21,39;UBERON:0006240,3.66e-21,39;UBERON:0000955,4.91e-21,47;UBERON:0006238,4.91e-21,47;UBERON:0010371,1.13e-20,73;UBERON:0003056,5.48e-18,49;UBERON:0002619,1.62e-17,17;UBERON:0000956,2.07e-16,21;UBERON:0001869,2.07e-16,21;UBERON:0000203,2.07e-16,21;UBERON:0001948,1.32e-15,5;UBERON:0002315,1.32e-15,5;UBERON:0010314,2.86e-15,92;UBERON:0002240,6.12e-13,6;UBERON:0005174,6.12e-13,6;UBERON:0001137,6.12e-13,6;UBERON:0002950,2.19e-11,4;UBERON:0001891,2.19e-11,4;UBERON:0009616,2.19e-11,4;UBERON:0010286,2.19e-11,4;UBERON:0000025,2.93e-11,114;UBERON:0004111,3.70e-10,122;UBERON:0002257,6.21e-10,3;UBERON:0004684,1.77e-09,3;UBERON:0002275,1.77e-09,3;UBERON:0002038,5.94e-09,3;UBERON:0009663,5.94e-09,3;UBERON:0009661,5.94e-09,3;UBERON:0000125,5.94e-09,3;UBERON:0002308,5.94e-09,3;UBERON:0003076,1.71e-08,12;UBERON:0003057,1.71e-08,12;UBERON:0002420,2.25e-08,8;UBERON:0007245,2.25e-08,8;UBERON:0010009,2.25e-08,8;UBERON:0010011,2.25e-08,8;UBERON:0000454,2.25e-08,8;UBERON:0011216,5.55e-08,194;UBERON:0002256,2.63e-07,2 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0,0,0,11.9973413449598,13.9147180799517,0.367472397644862,0,0,5.50579404996943,2.042997409363,3.84016333140609,1.31886287730194,0.731901148819277,0.52091337055676,2.51264699101243,2.8138130501584,1.5279824777681,16.7938293719991,9.11178757114259,2.98239113320481,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,0.457500602818626,2.26177833803156,1.56441888173049,2.04572365864264,2.28566849015516,1.1356888414743,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.514523061896422,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777804753376191,0.516639293910924,0.506868376472335,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0,0,0,0,0.167884616364078,0.19318959403219,0.375364950902364,0,0,0,3.3885110557024,1.84130094602871,3.43737308063638,4.29632955859219,2.74033007908257,1.5107877947794,2.70009000092722,1.80128481289688,1.81256963593682,1.03552062350364,0,0,0,0.243106717068294,0.419226325255965,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.50695859978048,0.565879024158229,0.280924522409647,0.192075457214608,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,1.02860775715625,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.474540072496697,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0.441182838239031,0 | |||
|short_description=p2@Amn | |||
}} |
Revision as of 22:18, 12 September 2013
Short description: | p2@Amn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Amn_5end |
Coexpression cluster: | MCL_coexpression_mm9:803 |
Association with transcript: | 0bp_to_uc007pcq.1_5end |
EntrezGene: | Amn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.23e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-21 | 23 |
neuron | 3.86e-14 | 33 |
neuronal stem cell | 3.86e-14 | 33 |
neuroblast | 3.86e-14 | 33 |
electrically signaling cell | 3.86e-14 | 33 |
electrically responsive cell | 1.71e-11 | 39 |
electrically active cell | 1.71e-11 | 39 |
neural cell | 3.84e-10 | 43 |
neuron of the ventral spinal cord | 6.21e-10 | 3 |
ectodermal cell | 7.65e-10 | 44 |
neurectodermal cell | 7.65e-10 | 44 |
raphe nuclei neuron | 1.77e-09 | 3 |
neuron of the substantia nigra | 5.94e-09 | 3 |
neuron of the dorsal spinal cord | 2.63e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.