FFCP PHASE1:Mm9::chr15:82169231..82169284,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17939|HGNC=|MCL_coexpression_id=61|UniProt=Q9QWR8,Q3U6T2,Q3UZX5|association_with_transcript=0bp_to_ENSMUST00000023088,NM_008669,uc007wyw.2,uc007wyx.2_5end|description=CAGE_peak_2_at_Naga_5end|id=chr15:82169231..82169284,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.05e-12!59;UBERON:0000160!1.63e-11!43;UBERON:0004119!5.39e-07!130;UBERON:0000925!5.39e-07!130;UBERON:0006595!5.39e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.40e-10,47;UBERON:0000160,2.11e-09,31;UBERON:0002100,4.13e-07,90|phase1_expression=18.8975639583657,22.3344260889191,22.2949627300873,26.616850595001,25.5456822272637,16.6200479192771,18.9226238882376,13.1705789910408,3.37892933164,3.27690336850791,1.36974374580404,1.43589886191606,9.0736386863539,9.87850547334671,8.32774404539157,15.1856450542369,25.8837894907414,8.99067171270977,8.22686601634433,5.94145512517242,23.4719480816953,3.07801948722744,4.70159620450084,18.2391361984484,25.4644301984559,17.8011908875656,21.1073378117947,21.5471232685889,44.2754567333351,32.5118867390311,34.3682291515722,13.3356441426523,14.1464901144451,15.8481681015439,11.8429164098023,14.1299448554718,13.4751775133164,15.9042019680025,28.9094077473806,20.9409497589519,8.82347232046521,6.14740936462601,13.1087795318411,27.9490935905782,28.8924253975616,19.0888622248149,46.1610893165343,25.0728929837513,22.6276768216506,20.9984291000226,19.8780718708015,28.7505128729943,5.87239121202077,9.42970784614748,9.07453257684653,12.0911934936895,14.6132054368766,13.9231464914909,3.23706337375356,1.5869729378161,3.1691570175309,7.45457970552091,22.2323699027785,26.5470416598013,26.6993917893083,26.2877642530057,32.3568119359877,66.0855485153074,2.38486108309499,3.10513658162888,2.94454945891935,5.99867067247988,8.83474163806454,3.79721477566358,3.06705507258356,1.83843757322004,3.30347642998166,8.42736431362239,4.45458946443106,3.42904348098504,2.19570344645783,1.56274011167028,8.37548997004143,11.2552522006336,7.18151764551008,5.30331453852602,4.8406371471695,3.16879057903011,2.27178579999552,3.24957708459178,31.0155002910795,27.5335640634044,13.599426674155,21.0484244738749,24.0417274455638,21.5052905806721,19.24088555805,26.587130322177,24.6796704372725,27.5604868118065,19.2955485094052,28.2318250311499,7.64415719119937,0,7.79367747640371,7.09407623330276,8.59391556525132,17.5843174767352,20.4560928081266,19.5943623565569,10.4091196059682,14.9188084372949,23.753396217374,20.0461111934988,22.694620477191,23.3739859873196,76.6304399976559,17.7857209011491,20.3460426948471,14.7207833452142,13.2504911076236,14.0613823409214,46.5979403045305,16.6885054296582,12.5668024088073,34.7421595083684,17.2533779288525,21.5964983157627,23.507992008517,11.833460512981,13.2675174817402,4.27224797183739,9.38651329038293,10.2286182932132,8.93488591606108,12.8170597823529,21.1825876808658,22.1444407685966,33.1066813548114,18.3084414621232,8.58794923553845,8.96618207290544,7.56260945182467,11.7549757911858,11.1579858608178,12.1708034270607,11.4316103962869,21.7310831420773,4.52692785158969,7.75334928688059,9.67731182901719,11.3981780862339,6.67313398141435,18.4573648256748,15.8452245034116,11.7430217422911,23.87524836865,20.8451804762919,23.5855704498342,11.8061690345236,10.7881987591304,9.00310307305074,14.4414288706978,9.44468312387538,13.1127045954272,17.9051137457814,15.8281306825775,16.8142093008724,9.70903114489535,16.2525789438304,13.0520783368828,15.6433986545106,14.0512073786272,15.9705638324842,13.8791366052324,6.48299057989492,51.2149113624887,21.1560453330835,6.61193576659225,11.3795969211615,15.0774929746849,56.0680198452892,86.7274370994994,140.576737697181,37.0132668004719,210.979361001458,157.587175917769,202.33873206585,160.650407786155,33.2563181202062,33.2852596807029,38.6334070113472,10.0523987505133,10.1681176222659,10.1436962105772,14.255592949172,19.0073437424273,25.4593026201856,31.4917954878801,35.2788253671249,34.3827213972611,42.4486243890994,27.2736416920177,10.0107063429656,13.3660116676978,13.0420025183215,17.8516906821883,16.4000468631643,24.6987076227977,23.0156909960649,17.9970101720289,17.0228076176611,14.3768206527355,23.8170206507842,19.3463357331028,20.4588891137161,17.5809465251474,27.4992807177119,21.985629629826,8.14813070613084,9.4519686336375,8.99648954608497,10.7957514212711,14.573044397438,25.9467568565755,19.1230974900643,18.4433118604243,20.8176808269848,18.337298395611,24.2517705779292,29.5291318990681,31.2441966536065,61.8244264151016,26.1074728232981,27.538799289066,33.6642830491774,13.1651483789989,15.3547309435786,9.67216177722385,12.3710754330143,6.62567260774139,5.46614242015294,4.73931475012158,7.40803273652911,5.34716817797746,3.11384183867716,7.2865926301481,4.09158201075837,7.11518000303742,10.6036034419196,18.8780313326997,24.9291845134157,19.7093220817827,24.4155781999352,27.8764790513922,16.5090832585387,19.6510312027088,18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| ||
|EntrezGene=17939 | |||
|HGNC= | |||
|MCL_coexpression_id=61 | |||
|UniProt=Q9QWR8,Q3U6T2,Q3UZX5 | |||
|association_with_transcript=0bp_to_ENSMUST00000023088,NM_008669,uc007wyw.2,uc007wyx.2_5end | |||
|description=CAGE_peak_2_at_Naga_5end | |||
|id=chr15:82169231..82169284,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.05e-12!59;UBERON:0000160!1.63e-11!43;UBERON:0004119!5.39e-07!130;UBERON:0000925!5.39e-07!130;UBERON:0006595!5.39e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.40e-10,47;UBERON:0000160,2.11e-09,31;UBERON:0002100,4.13e-07,90 | |||
|phase1_expression=18.8975639583657,22.3344260889191,22.2949627300873,26.616850595001,25.5456822272637,16.6200479192771,18.9226238882376,13.1705789910408,3.37892933164,3.27690336850791,1.36974374580404,1.43589886191606,9.0736386863539,9.87850547334671,8.32774404539157,15.1856450542369,25.8837894907414,8.99067171270977,8.22686601634433,5.94145512517242,23.4719480816953,3.07801948722744,4.70159620450084,18.2391361984484,25.4644301984559,17.8011908875656,21.1073378117947,21.5471232685889,44.2754567333351,32.5118867390311,34.3682291515722,13.3356441426523,14.1464901144451,15.8481681015439,11.8429164098023,14.1299448554718,13.4751775133164,15.9042019680025,28.9094077473806,20.9409497589519,8.82347232046521,6.14740936462601,13.1087795318411,27.9490935905782,28.8924253975616,19.0888622248149,46.1610893165343,25.0728929837513,22.6276768216506,20.9984291000226,19.8780718708015,28.7505128729943,5.87239121202077,9.42970784614748,9.07453257684653,12.0911934936895,14.6132054368766,13.9231464914909,3.23706337375356,1.5869729378161,3.1691570175309,7.45457970552091,22.2323699027785,26.5470416598013,26.6993917893083,26.2877642530057,32.3568119359877,66.0855485153074,2.38486108309499,3.10513658162888,2.94454945891935,5.99867067247988,8.83474163806454,3.79721477566358,3.06705507258356,1.83843757322004,3.30347642998166,8.42736431362239,4.45458946443106,3.42904348098504,2.19570344645783,1.56274011167028,8.37548997004143,11.2552522006336,7.18151764551008,5.30331453852602,4.8406371471695,3.16879057903011,2.27178579999552,3.24957708459178,31.0155002910795,27.5335640634044,13.599426674155,21.0484244738749,24.0417274455638,21.5052905806721,19.24088555805,26.587130322177,24.6796704372725,27.5604868118065,19.2955485094052,28.2318250311499,7.64415719119937,0,7.79367747640371,7.09407623330276,8.59391556525132,17.5843174767352,20.4560928081266,19.5943623565569,10.4091196059682,14.9188084372949,23.753396217374,20.0461111934988,22.694620477191,23.3739859873196,76.6304399976559,17.7857209011491,20.3460426948471,14.7207833452142,13.2504911076236,14.0613823409214,46.5979403045305,16.6885054296582,12.5668024088073,34.7421595083684,17.2533779288525,21.5964983157627,23.507992008517,11.833460512981,13.2675174817402,4.27224797183739,9.38651329038293,10.2286182932132,8.93488591606108,12.8170597823529,21.1825876808658,22.1444407685966,33.1066813548114,18.3084414621232,8.58794923553845,8.96618207290544,7.56260945182467,11.7549757911858,11.1579858608178,12.1708034270607,11.4316103962869,21.7310831420773,4.52692785158969,7.75334928688059,9.67731182901719,11.3981780862339,6.67313398141435,18.4573648256748,15.8452245034116,11.7430217422911,23.87524836865,20.8451804762919,23.5855704498342,11.8061690345236,10.7881987591304,9.00310307305074,14.4414288706978,9.44468312387538,13.1127045954272,17.9051137457814,15.8281306825775,16.8142093008724,9.70903114489535,16.2525789438304,13.0520783368828,15.6433986545106,14.0512073786272,15.9705638324842,13.8791366052324,6.48299057989492,51.2149113624887,21.1560453330835,6.61193576659225,11.3795969211615,15.0774929746849,56.0680198452892,86.7274370994994,140.576737697181,37.0132668004719,210.979361001458,157.587175917769,202.33873206585,160.650407786155,33.2563181202062,33.2852596807029,38.6334070113472,10.0523987505133,10.1681176222659,10.1436962105772,14.255592949172,19.0073437424273,25.4593026201856,31.4917954878801,35.2788253671249,34.3827213972611,42.4486243890994,27.2736416920177,10.0107063429656,13.3660116676978,13.0420025183215,17.8516906821883,16.4000468631643,24.6987076227977,23.0156909960649,17.9970101720289,17.0228076176611,14.3768206527355,23.8170206507842,19.3463357331028,20.4588891137161,17.5809465251474,27.4992807177119,21.985629629826,8.14813070613084,9.4519686336375,8.99648954608497,10.7957514212711,14.573044397438,25.9467568565755,19.1230974900643,18.4433118604243,20.8176808269848,18.337298395611,24.2517705779292,29.5291318990681,31.2441966536065,61.8244264151016,26.1074728232981,27.538799289066,33.6642830491774,13.1651483789989,15.3547309435786,9.67216177722385,12.3710754330143,6.62567260774139,5.46614242015294,4.73931475012158,7.40803273652911,5.34716817797746,3.11384183867716,7.2865926301481,4.09158201075837,7.11518000303742,10.6036034419196,18.8780313326997,24.9291845134157,19.7093220817827,24.4155781999352,27.8764790513922,16.5090832585387,19.6510312027088,18.6719028958339,24.5100571091041,25.517117279346,49.101375701962,17.4496190149203,22.1028374598527,18.3301319602773,26.3546521437497,19.5957532171555,30.2991249120871,6.30213829109586,12.9358683782754,13.2888961719587,14.5418991586664,18.3719882130133,22.0495687606842,35.9268639955227,29.0992917999001,55.5000025663209,52.7062871351359,14.8397627647332,15.9849782428946,10.8563264870681,10.504766272276,10.669158483429,53.3409931032627,12.0526446306831,10.9357363710626,19.8131393244694,13.7043950253587,14.8811081033706,15.4464477324758,11.2101304871196,21.9272174692073,23.5118439903745,18.5187964897928,31.5041303944987,11.2299277721303,16.06223790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| |||
|short_description=p2@Naga | |||
}} | |||
Revision as of 11:20, 13 September 2013
| Short description: | p2@Naga |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Naga_5end |
| Coexpression cluster: | MCL_coexpression_mm9:61 |
| Association with transcript: | 0bp_to_ENSMUST00000023088, NM_008669, uc007wyw.2, uc007wyx.2_5end |
| EntrezGene: | Naga |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 4.40e-10 | 47 |
| intestine | 2.11e-09 | 31 |
| trunk | 4.13e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
