FFCP PHASE1:Mm9::chr14:71028857..71028868,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13829|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-3bp_to_NM_001252665_5end|description=CAGE_peak_9_at_Epb4.9_5end|id=chr14:71028857..71028868,-|ontology_enrichment_celltype=CL:0000117!1.46e-16!23;CL:0000337!1.46e-16!23;CL:0000540!1.73e-09!33;CL:0000047!1.73e-09!33;CL:0000031!1.73e-09!33;CL:0000404!1.73e-09!33;CL:0000393!4.38e-07!39;CL:0000211!4.38e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.21e-24,23;CL:0000337,3.21e-24,23;CL:0000540,1.42e-15,33;CL:0000047,1.42e-15,33;CL:0000031,1.42e-15,33;CL:0000404,1.42e-15,33;CL:0000393,1.57e-12,39;CL:0000211,1.57e-12,39;CL:0002319,5.59e-11,43;CL:0000221,1.23e-10,44;CL:0000133,1.23e-10,44;CL:0002610,8.83e-08,3;CL:0002614,1.26e-07,3;CL:0002612,2.30e-07,3;CL:0000120,7.71e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.98e-24!52;UBERON:0005068!5.98e-24!52;UBERON:0006241!5.98e-24!52;UBERON:0007135!5.98e-24!52;UBERON:0002020!9.83e-23!34;UBERON:0001017!3.31e-22!73;UBERON:0005743!3.31e-22!73;UBERON:0000073!3.89e-22!75;UBERON:0001016!3.89e-22!75;UBERON:0002346!9.08e-22!71;UBERON:0003075!9.08e-22!71;UBERON:0007284!9.08e-22!71;UBERON:0000955!9.49e-22!50;UBERON:0006238!9.49e-22!50;UBERON:0002616!8.35e-21!49;UBERON:0000033!9.30e-20!63;UBERON:0004121!1.65e-18!102;UBERON:0000924!1.65e-18!102;UBERON:0006601!1.65e-18!102;UBERON:0002791!2.35e-17!29;UBERON:0003528!2.35e-17!29;UBERON:0001893!2.35e-17!29;UBERON:0003056!7.09e-16!49;UBERON:0003080!1.54e-15!40;UBERON:0002780!1.49e-14!39;UBERON:0001890!1.49e-14!39;UBERON:0006240!1.49e-14!39;UBERON:0002021!4.85e-11!10;UBERON:0000411!4.85e-11!10;UBERON:0001950!4.85e-11!10;UBERON:0007811!5.79e-11!86;UBERON:0002619!1.81e-10!17;UBERON:0000956!3.44e-10!21;UBERON:0001869!3.44e-10!21;UBERON:0000203!3.44e-10!21;UBERON:0003076!2.16e-09!12;UBERON:0003057!2.16e-09!12;UBERON:0000153!5.33e-09!94;UBERON:0002420!5.65e-09!8;UBERON:0007245!5.65e-09!8;UBERON:0010009!5.65e-09!8;UBERON:0010011!5.65e-09!8;UBERON:0000454!5.65e-09!8;UBERON:0002240!3.78e-08!6;UBERON:0005174!3.78e-08!6;UBERON:0001137!3.78e-08!6;UBERON:0002298!5.08e-08!6;UBERON:0001948!6.05e-07!5;UBERON:0002315!6.05e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.74e-40,54;UBERON:0001017,1.89e-38,73;UBERON:0001016,3.34e-37,75;UBERON:0001049,1.99e-36,52;UBERON:0005068,1.99e-36,52;UBERON:0006241,1.99e-36,52;UBERON:0007135,1.99e-36,52;UBERON:0002020,1.82e-31,34;UBERON:0002346,3.60e-28,64;UBERON:0003075,3.60e-28,64;UBERON:0007284,3.60e-28,64;UBERON:0004121,1.33e-27,95;UBERON:0000924,1.33e-27,95;UBERON:0006601,1.33e-27,95;UBERON:0000955,3.49e-27,47;UBERON:0006238,3.49e-27,47;UBERON:0002616,1.32e-25,46;UBERON:0010371,9.29e-24,73;UBERON:0003528,3.59e-22,29;UBERON:0002791,3.59e-22,29;UBERON:0001893,3.59e-22,29;UBERON:0003080,6.41e-21,40;UBERON:0002021,2.19e-19,10;UBERON:0000411,2.19e-19,10;UBERON:0001950,2.19e-19,10;UBERON:0002780,2.96e-19,39;UBERON:0001890,2.96e-19,39;UBERON:0006240,2.96e-19,39;UBERON:0010314,2.79e-17,92;UBERON:0003076,3.61e-17,12;UBERON:0003057,3.61e-17,12;UBERON:0003056,4.53e-16,49;UBERON:0002240,5.95e-14,6;UBERON:0005174,5.95e-14,6;UBERON:0001137,5.95e-14,6;UBERON:0002619,6.74e-13,17;UBERON:0000025,1.74e-12,114;UBERON:0002420,2.41e-12,8;UBERON:0007245,2.41e-12,8;UBERON:0010009,2.41e-12,8;UBERON:0010011,2.41e-12,8;UBERON:0000454,2.41e-12,8;UBERON:0000956,4.27e-12,21;UBERON:0001869,4.27e-12,21;UBERON:0000203,4.27e-12,21;UBERON:0001948,1.07e-11,5;UBERON:0002315,1.07e-11,5;UBERON:0004111,3.57e-11,122;UBERON:0002950,8.55e-10,4;UBERON:0001891,8.55e-10,4;UBERON:0009616,8.55e-10,4;UBERON:0010286,8.55e-10,4;UBERON:0011216,3.87e-09,194;UBERON:0004684,8.83e-08,3;UBERON:0002275,8.83e-08,3;UBERON:0002038,1.26e-07,3;UBERON:0009663,1.26e-07,3;UBERON:0009661,1.26e-07,3;UBERON:0000125,1.26e-07,3;UBERON:0002308,1.26e-07,3;UBERON:0002257,2.30e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0,0,6.28432165688368,5.07997644188711,0.244981598429908,0.287536413054709,0,4.40463523997555,4.97980618532232,4.45458946443106,2.63772575460388,3.01909223887952,1.04182674111352,5.30447698102624,3.93933827022176,3.66715794664344,7.07108605136802,2.13557521198654,3.91438836233131,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,2.92780797011547,1.25668024088073,0,0,0,0,5.54225365797844,3.66000482254901,0.628271760564322,3.82413504423008,1.79000820131231,4.98691306942944,2.59586020908412,0,0,0,0,0,0,0,0.30140963567143,0.272145996605311,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,3.36463917702604,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,2.82375921308533,4.14292712856459,2.86447756719698,2.57779773515531,3.42541259885321,6.7985450765073,2.02506750069542,3.60256962579376,3.17199686288943,2.5888015587591,0,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.576226371643824,0.689225627467359,0.952587382566147,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.177475806159338,0,0.726732083161643,0.0941093804153306,0.25384382367503,0.73171189149109,0.526139422875686,0.135804113845862,1.68342681497322,0.237270036248348,0,0.409231043169689,0.309873682371932,0.192906610981141,1.24905288968973,0.233931608445408,0.429742108096597,0.191288332068843,0,0|short_description=p9@Epb4.9}} | ||
|EntrezGene=13829 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_NM_001252665_5end | |||
|description=CAGE_peak_9_at_Epb4.9_5end | |||
|id=chr14:71028857..71028868,- | |||
|ontology_enrichment_celltype=CL:0000117!1.46e-16!23;CL:0000337!1.46e-16!23;CL:0000540!1.73e-09!33;CL:0000047!1.73e-09!33;CL:0000031!1.73e-09!33;CL:0000404!1.73e-09!33;CL:0000393!4.38e-07!39;CL:0000211!4.38e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.21e-24,23;CL:0000337,3.21e-24,23;CL:0000540,1.42e-15,33;CL:0000047,1.42e-15,33;CL:0000031,1.42e-15,33;CL:0000404,1.42e-15,33;CL:0000393,1.57e-12,39;CL:0000211,1.57e-12,39;CL:0002319,5.59e-11,43;CL:0000221,1.23e-10,44;CL:0000133,1.23e-10,44;CL:0002610,8.83e-08,3;CL:0002614,1.26e-07,3;CL:0002612,2.30e-07,3;CL:0000120,7.71e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.98e-24!52;UBERON:0005068!5.98e-24!52;UBERON:0006241!5.98e-24!52;UBERON:0007135!5.98e-24!52;UBERON:0002020!9.83e-23!34;UBERON:0001017!3.31e-22!73;UBERON:0005743!3.31e-22!73;UBERON:0000073!3.89e-22!75;UBERON:0001016!3.89e-22!75;UBERON:0002346!9.08e-22!71;UBERON:0003075!9.08e-22!71;UBERON:0007284!9.08e-22!71;UBERON:0000955!9.49e-22!50;UBERON:0006238!9.49e-22!50;UBERON:0002616!8.35e-21!49;UBERON:0000033!9.30e-20!63;UBERON:0004121!1.65e-18!102;UBERON:0000924!1.65e-18!102;UBERON:0006601!1.65e-18!102;UBERON:0002791!2.35e-17!29;UBERON:0003528!2.35e-17!29;UBERON:0001893!2.35e-17!29;UBERON:0003056!7.09e-16!49;UBERON:0003080!1.54e-15!40;UBERON:0002780!1.49e-14!39;UBERON:0001890!1.49e-14!39;UBERON:0006240!1.49e-14!39;UBERON:0002021!4.85e-11!10;UBERON:0000411!4.85e-11!10;UBERON:0001950!4.85e-11!10;UBERON:0007811!5.79e-11!86;UBERON:0002619!1.81e-10!17;UBERON:0000956!3.44e-10!21;UBERON:0001869!3.44e-10!21;UBERON:0000203!3.44e-10!21;UBERON:0003076!2.16e-09!12;UBERON:0003057!2.16e-09!12;UBERON:0000153!5.33e-09!94;UBERON:0002420!5.65e-09!8;UBERON:0007245!5.65e-09!8;UBERON:0010009!5.65e-09!8;UBERON:0010011!5.65e-09!8;UBERON:0000454!5.65e-09!8;UBERON:0002240!3.78e-08!6;UBERON:0005174!3.78e-08!6;UBERON:0001137!3.78e-08!6;UBERON:0002298!5.08e-08!6;UBERON:0001948!6.05e-07!5;UBERON:0002315!6.05e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.74e-40,54;UBERON:0001017,1.89e-38,73;UBERON:0001016,3.34e-37,75;UBERON:0001049,1.99e-36,52;UBERON:0005068,1.99e-36,52;UBERON:0006241,1.99e-36,52;UBERON:0007135,1.99e-36,52;UBERON:0002020,1.82e-31,34;UBERON:0002346,3.60e-28,64;UBERON:0003075,3.60e-28,64;UBERON:0007284,3.60e-28,64;UBERON:0004121,1.33e-27,95;UBERON:0000924,1.33e-27,95;UBERON:0006601,1.33e-27,95;UBERON:0000955,3.49e-27,47;UBERON:0006238,3.49e-27,47;UBERON:0002616,1.32e-25,46;UBERON:0010371,9.29e-24,73;UBERON:0003528,3.59e-22,29;UBERON:0002791,3.59e-22,29;UBERON:0001893,3.59e-22,29;UBERON:0003080,6.41e-21,40;UBERON:0002021,2.19e-19,10;UBERON:0000411,2.19e-19,10;UBERON:0001950,2.19e-19,10;UBERON:0002780,2.96e-19,39;UBERON:0001890,2.96e-19,39;UBERON:0006240,2.96e-19,39;UBERON:0010314,2.79e-17,92;UBERON:0003076,3.61e-17,12;UBERON:0003057,3.61e-17,12;UBERON:0003056,4.53e-16,49;UBERON:0002240,5.95e-14,6;UBERON:0005174,5.95e-14,6;UBERON:0001137,5.95e-14,6;UBERON:0002619,6.74e-13,17;UBERON:0000025,1.74e-12,114;UBERON:0002420,2.41e-12,8;UBERON:0007245,2.41e-12,8;UBERON:0010009,2.41e-12,8;UBERON:0010011,2.41e-12,8;UBERON:0000454,2.41e-12,8;UBERON:0000956,4.27e-12,21;UBERON:0001869,4.27e-12,21;UBERON:0000203,4.27e-12,21;UBERON:0001948,1.07e-11,5;UBERON:0002315,1.07e-11,5;UBERON:0004111,3.57e-11,122;UBERON:0002950,8.55e-10,4;UBERON:0001891,8.55e-10,4;UBERON:0009616,8.55e-10,4;UBERON:0010286,8.55e-10,4;UBERON:0011216,3.87e-09,194;UBERON:0004684,8.83e-08,3;UBERON:0002275,8.83e-08,3;UBERON:0002038,1.26e-07,3;UBERON:0009663,1.26e-07,3;UBERON:0009661,1.26e-07,3;UBERON:0000125,1.26e-07,3;UBERON:0002308,1.26e-07,3;UBERON:0002257,2.30e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0,0,6.28432165688368,5.07997644188711,0.244981598429908,0.287536413054709,0,4.40463523997555,4.97980618532232,4.45458946443106,2.63772575460388,3.01909223887952,1.04182674111352,5.30447698102624,3.93933827022176,3.66715794664344,7.07108605136802,2.13557521198654,3.91438836233131,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,2.92780797011547,1.25668024088073,0,0,0,0,5.54225365797844,3.66000482254901,0.628271760564322,3.82413504423008,1.79000820131231,4.98691306942944,2.59586020908412,0,0,0,0,0,0,0,0.30140963567143,0.272145996605311,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,3.36463917702604,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,2.82375921308533,4.14292712856459,2.86447756719698,2.57779773515531,3.42541259885321,6.7985450765073,2.02506750069542,3.60256962579376,3.17199686288943,2.5888015587591,0,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.576226371643824,0.689225627467359,0.952587382566147,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.177475806159338,0,0.726732083161643,0.0941093804153306,0.25384382367503,0.73171189149109,0.526139422875686,0.135804113845862,1.68342681497322,0.237270036248348,0,0.409231043169689,0.309873682371932,0.192906610981141,1.24905288968973,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p9@Epb4.9 | |||
}} |
Revision as of 03:02, 13 September 2013
Short description: | p9@Epb4.9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Epb4.9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -3bp_to_NM_001252665_5end |
EntrezGene: | Epb4.9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.21e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.21e-24 | 23 |
neuron | 1.42e-15 | 33 |
neuronal stem cell | 1.42e-15 | 33 |
neuroblast | 1.42e-15 | 33 |
electrically signaling cell | 1.42e-15 | 33 |
electrically responsive cell | 1.57e-12 | 39 |
electrically active cell | 1.57e-12 | 39 |
neural cell | 5.59e-11 | 43 |
ectodermal cell | 1.23e-10 | 44 |
neurectodermal cell | 1.23e-10 | 44 |
raphe nuclei neuron | 8.83e-08 | 3 |
neuron of the substantia nigra | 1.26e-07 | 3 |
neuron of the ventral spinal cord | 2.30e-07 | 3 |
granule cell | 7.71e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.