FFCP PHASE1:Mm9::chr1:95917036..95917062,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=241159|HGNC=|MCL_coexpression_id=212|UniProt=Q8BZL1,C5NTX9|association_with_transcript=-7bp_to_ENSMUST00000050890,NM_173772,uc007ceu.1,uc011wpt.1_5end|description=CAGE_peak_1_at_Neu4_5end|id=chr1:95917036..95917062,+|ontology_enrichment_celltype=CL:0000117!1.58e-08!23;CL:0000337!1.58e-08!23;CL:0002614!2.90e-08!3;CL:0002610!9.08e-08!3|ontology_enrichment_celltype_v019_2=CL:0002614,8.68e-10,3;CL:0002610,3.52e-09,3;CL:0000117,8.47e-09,23;CL:0000337,8.47e-09,23;CL:0002611,6.94e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.24e-33!73;UBERON:0005743!1.24e-33!73;UBERON:0001049!4.29e-33!52;UBERON:0005068!4.29e-33!52;UBERON:0006241!4.29e-33!52;UBERON:0007135!4.29e-33!52;UBERON:0000073!1.53e-32!75;UBERON:0001016!1.53e-32!75;UBERON:0000955!6.24e-32!50;UBERON:0006238!6.24e-32!50;UBERON:0002616!2.77e-30!49;UBERON:0000033!5.34e-24!63;UBERON:0002020!1.68e-23!34;UBERON:0002346!1.88e-22!71;UBERON:0003075!1.88e-22!71;UBERON:0007284!1.88e-22!71;UBERON:0002021!2.41e-22!10;UBERON:0000411!2.41e-22!10;UBERON:0001950!2.41e-22!10;UBERON:0004121!5.55e-22!102;UBERON:0000924!5.55e-22!102;UBERON:0006601!5.55e-22!102;UBERON:0003080!9.16e-20!40;UBERON:0002780!4.85e-18!39;UBERON:0001890!4.85e-18!39;UBERON:0006240!4.85e-18!39;UBERON:0002791!1.17e-17!29;UBERON:0003528!1.17e-17!29;UBERON:0001893!1.17e-17!29;UBERON:0007811!7.68e-16!86;UBERON:0002298!2.27e-15!6;UBERON:0003056!3.05e-15!49;UBERON:0002619!7.00e-15!17;UBERON:0003076!1.26e-14!12;UBERON:0003057!1.26e-14!12;UBERON:0000956!6.04e-14!21;UBERON:0001869!6.04e-14!21;UBERON:0000203!6.04e-14!21;UBERON:0000153!6.10e-14!94;UBERON:0000025!1.81e-11!114;UBERON:0002950!1.20e-10!4;UBERON:0001891!1.20e-10!4;UBERON:0009616!1.20e-10!4;UBERON:0004111!2.78e-10!122;UBERON:0002240!9.28e-10!6;UBERON:0005174!9.28e-10!6;UBERON:0001137!9.28e-10!6;UBERON:0002038!2.90e-08!3;UBERON:0002308!2.90e-08!3;UBERON:0009663!2.90e-08!3;UBERON:0009661!2.90e-08!3;UBERON:0006331!2.90e-08!3;UBERON:0000125!2.90e-08!3;UBERON:0004684!9.08e-08!3;UBERON:0002275!9.08e-08!3;UBERON:0001948!1.63e-07!5;UBERON:0002315!1.63e-07!5;UBERON:0000477!8.75e-07!154;UBERON:0000064!9.16e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.57e-32,54;UBERON:0001017,3.23e-31,73;UBERON:0001016,3.05e-30,75;UBERON:0001049,1.63e-28,52;UBERON:0005068,1.63e-28,52;UBERON:0006241,1.63e-28,52;UBERON:0007135,1.63e-28,52;UBERON:0000955,1.11e-23,47;UBERON:0006238,1.11e-23,47;UBERON:0004121,9.70e-23,95;UBERON:0000924,9.70e-23,95;UBERON:0006601,9.70e-23,95;UBERON:0002346,3.04e-22,64;UBERON:0003075,3.04e-22,64;UBERON:0007284,3.04e-22,64;UBERON:0002616,5.45e-22,46;UBERON:0002020,2.80e-21,34;UBERON:0010371,6.87e-19,73;UBERON:0003080,4.25e-18,40;UBERON:0002021,6.05e-18,10;UBERON:0000411,6.05e-18,10;UBERON:0001950,6.05e-18,10;UBERON:0003528,5.44e-17,29;UBERON:0002791,5.44e-17,29;UBERON:0001893,5.44e-17,29;UBERON:0002780,3.18e-16,39;UBERON:0001890,3.18e-16,39;UBERON:0006240,3.18e-16,39;UBERON:0003056,4.26e-14,49;UBERON:0010314,5.87e-14,92;UBERON:0002950,1.04e-12,4;UBERON:0001891,1.04e-12,4;UBERON:0009616,1.04e-12,4;UBERON:0010286,1.04e-12,4;UBERON:0002619,1.45e-12,17;UBERON:0000956,3.19e-12,21;UBERON:0001869,3.19e-12,21;UBERON:0000203,3.19e-12,21;UBERON:0003076,2.34e-11,12;UBERON:0003057,2.34e-11,12;UBERON:0000025,2.69e-10,114;UBERON:0002038,8.68e-10,3;UBERON:0009663,8.68e-10,3;UBERON:0009661,8.68e-10,3;UBERON:0000125,8.68e-10,3;UBERON:0002308,8.68e-10,3;UBERON:0004111,2.72e-09,122;UBERON:0004684,3.52e-09,3;UBERON:0002275,3.52e-09,3;UBERON:0011216,2.88e-08,194;UBERON:0002240,4.61e-08,6;UBERON:0005174,4.61e-08,6;UBERON:0001137,4.61e-08,6;UBERON:0001896,2.01e-07,2;UBERON:0002298,2.01e-07,2;UBERON:0005290,2.01e-07,2;UBERON:0010096,2.01e-07,2;UBERON:0002256,6.94e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39680088414724,1.53687322128622,0,0,0,2.57085885963423,4.19650227808066,0,0,0,3.30347642998166,2.42605942361857,2.76491759861238,0,0,0,3.07101298901519,3.37657566019008,4.27835093775068,1.47314292736834,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,4.49371918214468,1.37250180845588,0,2.78118912307642,3.3243009452943,4.36354893575076,7.30085683804909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,6.68106613575558,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,3.68260189205742,3.43737308063638,2.749650917499,2.74033007908257,3.0215755895588,4.05013500139084,0.900642406448441,0.906284817968409,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Neu4}} | ||
|EntrezGene=241159 | |||
|HGNC= | |||
|MCL_coexpression_id=212 | |||
|UniProt=Q8BZL1,C5NTX9 | |||
|association_with_transcript=-7bp_to_ENSMUST00000050890,NM_173772,uc007ceu.1,uc011wpt.1_5end | |||
|description=CAGE_peak_1_at_Neu4_5end | |||
|id=chr1:95917036..95917062,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.58e-08!23;CL:0000337!1.58e-08!23;CL:0002614!2.90e-08!3;CL:0002610!9.08e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,8.68e-10,3;CL:0002610,3.52e-09,3;CL:0000117,8.47e-09,23;CL:0000337,8.47e-09,23;CL:0002611,6.94e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.24e-33!73;UBERON:0005743!1.24e-33!73;UBERON:0001049!4.29e-33!52;UBERON:0005068!4.29e-33!52;UBERON:0006241!4.29e-33!52;UBERON:0007135!4.29e-33!52;UBERON:0000073!1.53e-32!75;UBERON:0001016!1.53e-32!75;UBERON:0000955!6.24e-32!50;UBERON:0006238!6.24e-32!50;UBERON:0002616!2.77e-30!49;UBERON:0000033!5.34e-24!63;UBERON:0002020!1.68e-23!34;UBERON:0002346!1.88e-22!71;UBERON:0003075!1.88e-22!71;UBERON:0007284!1.88e-22!71;UBERON:0002021!2.41e-22!10;UBERON:0000411!2.41e-22!10;UBERON:0001950!2.41e-22!10;UBERON:0004121!5.55e-22!102;UBERON:0000924!5.55e-22!102;UBERON:0006601!5.55e-22!102;UBERON:0003080!9.16e-20!40;UBERON:0002780!4.85e-18!39;UBERON:0001890!4.85e-18!39;UBERON:0006240!4.85e-18!39;UBERON:0002791!1.17e-17!29;UBERON:0003528!1.17e-17!29;UBERON:0001893!1.17e-17!29;UBERON:0007811!7.68e-16!86;UBERON:0002298!2.27e-15!6;UBERON:0003056!3.05e-15!49;UBERON:0002619!7.00e-15!17;UBERON:0003076!1.26e-14!12;UBERON:0003057!1.26e-14!12;UBERON:0000956!6.04e-14!21;UBERON:0001869!6.04e-14!21;UBERON:0000203!6.04e-14!21;UBERON:0000153!6.10e-14!94;UBERON:0000025!1.81e-11!114;UBERON:0002950!1.20e-10!4;UBERON:0001891!1.20e-10!4;UBERON:0009616!1.20e-10!4;UBERON:0004111!2.78e-10!122;UBERON:0002240!9.28e-10!6;UBERON:0005174!9.28e-10!6;UBERON:0001137!9.28e-10!6;UBERON:0002038!2.90e-08!3;UBERON:0002308!2.90e-08!3;UBERON:0009663!2.90e-08!3;UBERON:0009661!2.90e-08!3;UBERON:0006331!2.90e-08!3;UBERON:0000125!2.90e-08!3;UBERON:0004684!9.08e-08!3;UBERON:0002275!9.08e-08!3;UBERON:0001948!1.63e-07!5;UBERON:0002315!1.63e-07!5;UBERON:0000477!8.75e-07!154;UBERON:0000064!9.16e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.57e-32,54;UBERON:0001017,3.23e-31,73;UBERON:0001016,3.05e-30,75;UBERON:0001049,1.63e-28,52;UBERON:0005068,1.63e-28,52;UBERON:0006241,1.63e-28,52;UBERON:0007135,1.63e-28,52;UBERON:0000955,1.11e-23,47;UBERON:0006238,1.11e-23,47;UBERON:0004121,9.70e-23,95;UBERON:0000924,9.70e-23,95;UBERON:0006601,9.70e-23,95;UBERON:0002346,3.04e-22,64;UBERON:0003075,3.04e-22,64;UBERON:0007284,3.04e-22,64;UBERON:0002616,5.45e-22,46;UBERON:0002020,2.80e-21,34;UBERON:0010371,6.87e-19,73;UBERON:0003080,4.25e-18,40;UBERON:0002021,6.05e-18,10;UBERON:0000411,6.05e-18,10;UBERON:0001950,6.05e-18,10;UBERON:0003528,5.44e-17,29;UBERON:0002791,5.44e-17,29;UBERON:0001893,5.44e-17,29;UBERON:0002780,3.18e-16,39;UBERON:0001890,3.18e-16,39;UBERON:0006240,3.18e-16,39;UBERON:0003056,4.26e-14,49;UBERON:0010314,5.87e-14,92;UBERON:0002950,1.04e-12,4;UBERON:0001891,1.04e-12,4;UBERON:0009616,1.04e-12,4;UBERON:0010286,1.04e-12,4;UBERON:0002619,1.45e-12,17;UBERON:0000956,3.19e-12,21;UBERON:0001869,3.19e-12,21;UBERON:0000203,3.19e-12,21;UBERON:0003076,2.34e-11,12;UBERON:0003057,2.34e-11,12;UBERON:0000025,2.69e-10,114;UBERON:0002038,8.68e-10,3;UBERON:0009663,8.68e-10,3;UBERON:0009661,8.68e-10,3;UBERON:0000125,8.68e-10,3;UBERON:0002308,8.68e-10,3;UBERON:0004111,2.72e-09,122;UBERON:0004684,3.52e-09,3;UBERON:0002275,3.52e-09,3;UBERON:0011216,2.88e-08,194;UBERON:0002240,4.61e-08,6;UBERON:0005174,4.61e-08,6;UBERON:0001137,4.61e-08,6;UBERON:0001896,2.01e-07,2;UBERON:0002298,2.01e-07,2;UBERON:0005290,2.01e-07,2;UBERON:0010096,2.01e-07,2;UBERON:0002256,6.94e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39680088414724,1.53687322128622,0,0,0,2.57085885963423,4.19650227808066,0,0,0,3.30347642998166,2.42605942361857,2.76491759861238,0,0,0,3.07101298901519,3.37657566019008,4.27835093775068,1.47314292736834,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,4.49371918214468,1.37250180845588,0,2.78118912307642,3.3243009452943,4.36354893575076,7.30085683804909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,6.68106613575558,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,3.68260189205742,3.43737308063638,2.749650917499,2.74033007908257,3.0215755895588,4.05013500139084,0.900642406448441,0.906284817968409,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Neu4 | |||
}} |
Revision as of 21:22, 13 September 2013
Short description: | p1@Neu4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Neu4_5end |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | -7bp_to_ENSMUST00000050890, NM_173772, uc007ceu.1, uc011wpt.1_5end |
EntrezGene: | Neu4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 8.68e-10 | 3 |
raphe nuclei neuron | 3.52e-09 | 3 |
CNS neuron (sensu Vertebrata) | 8.47e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.47e-09 | 23 |
neuron of the dorsal spinal cord | 6.94e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.