FFCP PHASE1:Mm9::chr13:104709705..104709732,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=37|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:104709705..104709732,+|id=chr13:104709705..104709732,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,6.79e-16,1;CL:0002078,6.79e-16,1;CL:0000115,6.79e-16,1;CL:0002262,6.79e-16,1;CL:1000398,6.79e-16,1;CL:0000815,9.51e-16,1;CL:0000792,9.51e-16,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.73e-30,2;UBERON:0000076,1.73e-30,2;UBERON:0005333,1.73e-30,2;UBERON:0008425,1.73e-30,2;UBERON:0005311,1.73e-30,2;UBERON:0002394,6.79e-16,1;UBERON:0001281,6.79e-16,1;UBERON:0000353,6.79e-16,1;UBERON:0003497,6.79e-16,1;UBERON:0003909,6.79e-16,1;UBERON:0003928,6.79e-16,1;UBERON:0003835,6.79e-16,1;UBERON:0003513,6.79e-16,1;UBERON:0001280,6.79e-16,1;UBERON:0004647,6.79e-16,1;UBERON:0002294,6.79e-16,1;UBERON:0001173,6.79e-16,1;UBERON:0004912,6.79e-16,1;UBERON:0005171,6.79e-16,1;UBERON:0000305,1.33e-15,1;UBERON:0005153,1.76e-08,17;UBERON:0005157,2.62e-07,20|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0,3.48632973292256,0,0,0.171217968225505,0,0.513602189793617,0.174840804837995,0,0.607425802169478,0.699561878128147,0,0,0,0,0.397163804803541,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0.725362142011344,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,5.2175607966302,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0.125666591329675,2.71914464507811,0.86759614151947,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0.509196819251581,0,0,0,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0,0,0,0,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0,0,0.268412837520744,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,1.10851914099963,0.189491411770485,0,0,0,0,0,0.585400943573396,0.157635144106191,0.664394068946325,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,28.5223278351041,26.2139908989496,0.481651769963376,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.488660878060728,0.824850614862677,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0.23467170806371,0.42366414172764,0.661585194164886,0,0.484393280087717,0,0.119372344003136,0.164140899745061,0,0.556275906031529,0.170870880797853,0,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0.679913719975421,0.559805809294632,0.552799895217695,0,0.316335993581135,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0.621339313086926,0,0.299033092087958,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0,0.483168241652012,0.576060012515731,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0.39736270956253,0,0,0.100966449948148,0.15241361331,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p@chr13:104709705..104709732,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=37 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:104709705..104709732,+ | |||
|id=chr13:104709705..104709732,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.79e-16,1;CL:0002078,6.79e-16,1;CL:0000115,6.79e-16,1;CL:0002262,6.79e-16,1;CL:1000398,6.79e-16,1;CL:0000815,9.51e-16,1;CL:0000792,9.51e-16,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.73e-30,2;UBERON:0000076,1.73e-30,2;UBERON:0005333,1.73e-30,2;UBERON:0008425,1.73e-30,2;UBERON:0005311,1.73e-30,2;UBERON:0002394,6.79e-16,1;UBERON:0001281,6.79e-16,1;UBERON:0000353,6.79e-16,1;UBERON:0003497,6.79e-16,1;UBERON:0003909,6.79e-16,1;UBERON:0003928,6.79e-16,1;UBERON:0003835,6.79e-16,1;UBERON:0003513,6.79e-16,1;UBERON:0001280,6.79e-16,1;UBERON:0004647,6.79e-16,1;UBERON:0002294,6.79e-16,1;UBERON:0001173,6.79e-16,1;UBERON:0004912,6.79e-16,1;UBERON:0005171,6.79e-16,1;UBERON:0000305,1.33e-15,1;UBERON:0005153,1.76e-08,17;UBERON:0005157,2.62e-07,20 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0,3.48632973292256,0,0,0.171217968225505,0,0.513602189793617,0.174840804837995,0,0.607425802169478,0.699561878128147,0,0,0,0,0.397163804803541,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0.725362142011344,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,5.2175607966302,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0.125666591329675,2.71914464507811,0.86759614151947,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0.509196819251581,0,0,0,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0,0,0,0,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0,0,0.268412837520744,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,1.10851914099963,0.189491411770485,0,0,0,0,0,0.585400943573396,0.157635144106191,0.664394068946325,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,28.5223278351041,26.2139908989496,0.481651769963376,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.488660878060728,0.824850614862677,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0.23467170806371,0.42366414172764,0.661585194164886,0,0.484393280087717,0,0.119372344003136,0.164140899745061,0,0.556275906031529,0.170870880797853,0,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0.679913719975421,0.559805809294632,0.552799895217695,0,0.316335993581135,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0.621339313086926,0,0.299033092087958,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0,0.483168241652012,0.576060012515731,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0.39736270956253,0,0,0.100966449948148,0.15241361331,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr13:104709705..104709732,+ | |||
}} |
Revision as of 23:46, 12 September 2013
Short description: | p@chr13:104709705..104709732, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:104709705..104709732, + |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.79e-16 | 1 |
meso-epithelial cell | 6.79e-16 | 1 |
endothelial cell | 6.79e-16 | 1 |
endothelial cell of sinusoid | 6.79e-16 | 1 |
endothelial cell of hepatic sinusoid | 6.79e-16 | 1 |
regulatory T cell | 9.51e-16 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.51e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.73e-30 | 2 |
external ectoderm | 1.73e-30 | 2 |
mammary bud | 1.73e-30 | 2 |
mammary ridge | 1.73e-30 | 2 |
mammary placode | 1.73e-30 | 2 |
bile duct | 6.79e-16 | 1 |
hepatic sinusoid | 6.79e-16 | 1 |
parenchyma | 6.79e-16 | 1 |
abdomen blood vessel | 6.79e-16 | 1 |
sinusoid | 6.79e-16 | 1 |
digestive system duct | 6.79e-16 | 1 |
abdominal segment blood vessel | 6.79e-16 | 1 |
trunk blood vessel | 6.79e-16 | 1 |
liver parenchyma | 6.79e-16 | 1 |
liver lobule | 6.79e-16 | 1 |
biliary system | 6.79e-16 | 1 |
biliary tree | 6.79e-16 | 1 |
biliary bud | 6.79e-16 | 1 |
hepatic duct | 6.79e-16 | 1 |
amnion | 1.33e-15 | 1 |
epithelial bud | 1.76e-08 | 17 |
epithelial fold | 2.62e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.