FFCP PHASE1:Mm9::chr10:40655977..40656012,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:40655977..40656012,+|id=chr10:40655977..40656012,+|ontology_enrichment_celltype=CL:0000117!6.67e-09!23;CL:0000337!6.67e-09!23;CL:0000540!3.87e-07!33;CL:0000047!3.87e-07!33;CL:0000031!3.87e-07!33;CL:0000404!3.87e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.77e-14,23;CL:0000337,2.77e-14,23;CL:0000540,7.54e-09,33;CL:0000047,7.54e-09,33;CL:0000031,7.54e-09,33;CL:0000404,7.54e-09,33;CL:0000393,5.87e-07,39;CL:0000211,5.87e-07,39;CL:0002319,6.65e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.59e-18!73;UBERON:0005743!1.59e-18!73;UBERON:0001049!4.81e-18!52;UBERON:0005068!4.81e-18!52;UBERON:0006241!4.81e-18!52;UBERON:0007135!4.81e-18!52;UBERON:0000073!1.06e-17!75;UBERON:0001016!1.06e-17!75;UBERON:0002346!2.71e-17!71;UBERON:0003075!2.71e-17!71;UBERON:0007284!2.71e-17!71;UBERON:0000955!8.96e-16!50;UBERON:0006238!8.96e-16!50;UBERON:0004121!2.25e-15!102;UBERON:0000924!2.25e-15!102;UBERON:0006601!2.25e-15!102;UBERON:0002020!2.56e-15!34;UBERON:0000033!3.42e-15!63;UBERON:0002616!3.93e-15!49;UBERON:0003056!7.33e-15!49;UBERON:0003080!5.51e-14!40;UBERON:0002780!2.10e-13!39;UBERON:0001890!2.10e-13!39;UBERON:0006240!2.10e-13!39;UBERON:0002791!1.79e-12!29;UBERON:0003528!1.79e-12!29;UBERON:0001893!1.79e-12!29;UBERON:0000956!2.50e-09!21;UBERON:0001869!2.50e-09!21;UBERON:0000203!2.50e-09!21;UBERON:0002021!4.04e-08!10;UBERON:0000411!4.04e-08!10;UBERON:0001950!4.04e-08!10;UBERON:0000153!5.61e-08!94;UBERON:0002619!1.89e-07!17;UBERON:0000025!5.04e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.25e-32,34;UBERON:0000073,2.10e-31,54;UBERON:0001049,1.29e-30,52;UBERON:0005068,1.29e-30,52;UBERON:0006241,1.29e-30,52;UBERON:0007135,1.29e-30,52;UBERON:0000955,4.59e-28,47;UBERON:0006238,4.59e-28,47;UBERON:0003528,8.45e-28,29;UBERON:0002791,8.45e-28,29;UBERON:0001893,8.45e-28,29;UBERON:0001017,8.87e-28,73;UBERON:0001016,8.76e-27,75;UBERON:0002616,1.43e-26,46;UBERON:0002346,6.29e-25,64;UBERON:0003075,6.29e-25,64;UBERON:0007284,6.29e-25,64;UBERON:0003080,1.49e-24,40;UBERON:0002780,3.33e-23,39;UBERON:0001890,3.33e-23,39;UBERON:0006240,3.33e-23,39;UBERON:0010371,8.84e-21,73;UBERON:0000956,1.23e-20,21;UBERON:0001869,1.23e-20,21;UBERON:0000203,1.23e-20,21;UBERON:0004121,1.95e-20,95;UBERON:0000924,1.95e-20,95;UBERON:0006601,1.95e-20,95;UBERON:0003056,1.97e-20,49;UBERON:0002619,1.91e-17,17;UBERON:0002021,1.92e-15,10;UBERON:0000411,1.92e-15,10;UBERON:0001950,1.92e-15,10;UBERON:0010314,1.04e-14,92;UBERON:0000369,1.35e-09,5;UBERON:0002435,1.35e-09,5;UBERON:0000204,1.35e-09,5;UBERON:0010082,1.35e-09,5;UBERON:0000025,2.00e-09,114;UBERON:0004111,2.75e-08,122;UBERON:0002420,3.47e-08,8;UBERON:0007245,3.47e-08,8;UBERON:0010009,3.47e-08,8;UBERON:0010011,3.47e-08,8;UBERON:0000454,3.47e-08,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,2.42779753031517,3.70293685490423,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,1.24427534770173,2.29510095163874,0.420649922702764,1.99955689082663,0.883474163806454,1.10241719293459,2.30029130443767,0,0,3.06449611404451,0.921639199537461,1.58263545276233,4.11694396210843,1.56274011167028,0.558365998002762,0,2.44477196442896,2.35702868378934,1.85083185038834,1.86399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,2.34224637609238,6.91174132484402,0.255457055208591,0,0,0,1.9472783122627,3.20250421973039,4.14659361972453,3.82413504423008,3.3243009452943,2.0778804455956,2.43361894601636,0.509196819251581,0,0,0.210441855886474,1.43132487258974,0,0.180062129805349,0.30140963567143,0.748401490664606,0.512454881139399,0.468508622798644,0.517406741478031,0.862271971731369,1.51284864134255,0.703804496655795,0.876782929710299,0.278047249225598,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.804820204198858,0,0,0,0.162137619091711,0,0,0,5.25724871410318,4.32199371992995,0,0,1.2797295032114,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,1.89667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0.964887042726734,0.184753190166605,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.315270288212382,0,0,0.163863314715738,0.1726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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:40655977..40656012,+ | |||
|id=chr10:40655977..40656012,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.67e-09!23;CL:0000337!6.67e-09!23;CL:0000540!3.87e-07!33;CL:0000047!3.87e-07!33;CL:0000031!3.87e-07!33;CL:0000404!3.87e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.77e-14,23;CL:0000337,2.77e-14,23;CL:0000540,7.54e-09,33;CL:0000047,7.54e-09,33;CL:0000031,7.54e-09,33;CL:0000404,7.54e-09,33;CL:0000393,5.87e-07,39;CL:0000211,5.87e-07,39;CL:0002319,6.65e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.59e-18!73;UBERON:0005743!1.59e-18!73;UBERON:0001049!4.81e-18!52;UBERON:0005068!4.81e-18!52;UBERON:0006241!4.81e-18!52;UBERON:0007135!4.81e-18!52;UBERON:0000073!1.06e-17!75;UBERON:0001016!1.06e-17!75;UBERON:0002346!2.71e-17!71;UBERON:0003075!2.71e-17!71;UBERON:0007284!2.71e-17!71;UBERON:0000955!8.96e-16!50;UBERON:0006238!8.96e-16!50;UBERON:0004121!2.25e-15!102;UBERON:0000924!2.25e-15!102;UBERON:0006601!2.25e-15!102;UBERON:0002020!2.56e-15!34;UBERON:0000033!3.42e-15!63;UBERON:0002616!3.93e-15!49;UBERON:0003056!7.33e-15!49;UBERON:0003080!5.51e-14!40;UBERON:0002780!2.10e-13!39;UBERON:0001890!2.10e-13!39;UBERON:0006240!2.10e-13!39;UBERON:0002791!1.79e-12!29;UBERON:0003528!1.79e-12!29;UBERON:0001893!1.79e-12!29;UBERON:0000956!2.50e-09!21;UBERON:0001869!2.50e-09!21;UBERON:0000203!2.50e-09!21;UBERON:0002021!4.04e-08!10;UBERON:0000411!4.04e-08!10;UBERON:0001950!4.04e-08!10;UBERON:0000153!5.61e-08!94;UBERON:0002619!1.89e-07!17;UBERON:0000025!5.04e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.25e-32,34;UBERON:0000073,2.10e-31,54;UBERON:0001049,1.29e-30,52;UBERON:0005068,1.29e-30,52;UBERON:0006241,1.29e-30,52;UBERON:0007135,1.29e-30,52;UBERON:0000955,4.59e-28,47;UBERON:0006238,4.59e-28,47;UBERON:0003528,8.45e-28,29;UBERON:0002791,8.45e-28,29;UBERON:0001893,8.45e-28,29;UBERON:0001017,8.87e-28,73;UBERON:0001016,8.76e-27,75;UBERON:0002616,1.43e-26,46;UBERON:0002346,6.29e-25,64;UBERON:0003075,6.29e-25,64;UBERON:0007284,6.29e-25,64;UBERON:0003080,1.49e-24,40;UBERON:0002780,3.33e-23,39;UBERON:0001890,3.33e-23,39;UBERON:0006240,3.33e-23,39;UBERON:0010371,8.84e-21,73;UBERON:0000956,1.23e-20,21;UBERON:0001869,1.23e-20,21;UBERON:0000203,1.23e-20,21;UBERON:0004121,1.95e-20,95;UBERON:0000924,1.95e-20,95;UBERON:0006601,1.95e-20,95;UBERON:0003056,1.97e-20,49;UBERON:0002619,1.91e-17,17;UBERON:0002021,1.92e-15,10;UBERON:0000411,1.92e-15,10;UBERON:0001950,1.92e-15,10;UBERON:0010314,1.04e-14,92;UBERON:0000369,1.35e-09,5;UBERON:0002435,1.35e-09,5;UBERON:0000204,1.35e-09,5;UBERON:0010082,1.35e-09,5;UBERON:0000025,2.00e-09,114;UBERON:0004111,2.75e-08,122;UBERON:0002420,3.47e-08,8;UBERON:0007245,3.47e-08,8;UBERON:0010009,3.47e-08,8;UBERON:0010011,3.47e-08,8;UBERON:0000454,3.47e-08,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,2.42779753031517,3.70293685490423,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,1.24427534770173,2.29510095163874,0.420649922702764,1.99955689082663,0.883474163806454,1.10241719293459,2.30029130443767,0,0,3.06449611404451,0.921639199537461,1.58263545276233,4.11694396210843,1.56274011167028,0.558365998002762,0,2.44477196442896,2.35702868378934,1.85083185038834,1.86399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0,0.230615497256059,0,0.352766121407114,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,2.34224637609238,6.91174132484402,0.255457055208591,0,0,0,1.9472783122627,3.20250421973039,4.14659361972453,3.82413504423008,3.3243009452943,2.0778804455956,2.43361894601636,0.509196819251581,0,0,0.210441855886474,1.43132487258974,0,0.180062129805349,0.30140963567143,0.748401490664606,0.512454881139399,0.468508622798644,0.517406741478031,0.862271971731369,1.51284864134255,0.703804496655795,0.876782929710299,0.278047249225598,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.804820204198858,0,0,0,0.162137619091711,0,0,0,5.25724871410318,4.32199371992995,0,0,1.2797295032114,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,1.89667900953082,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0.964887042726734,0.184753190166605,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,1.28440471990234,0.937693492737625,0.491804836130026,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0,0.809621403349789,0.584511715822624,0,2.57057053137446,0.425820255624806,1.06839362200353,0.488660878060728,0.659880491890142,0,0.728341908464944,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.720244376125241,0.646793418913773,0.428674070063185,0,0.178368817602071,0.658196082408484,0,0,0.63549621259146,0,0,0.645857706783622,0.120625849856312,0.119372344003136,0,0.291480836629851,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,1.69107881605257,2.39226473670366,0.496375471371293,0.777804753376191,0.387479470433193,0.675824501963113,1.05621514781179,1.0416350787516,1.57289016638566,0.241584120826006,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,0.19318959403219,0,0.549454872801795,0,0,11.2950368523413,5.06357760157895,3.43737308063638,12.3734291287455,1.37016503954128,0.755393897389701,4.05013500139084,3.60256962579376,4.07828168085784,3.10656187051092,1.24544817101012,0.399024873401031,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.631790158511746,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.145346416632329,0,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,1.07435527024149,0.765153328275374,0,0 | |||
|short_description=p@chr10:40655977..40656012,+ | |||
}} |
Revision as of 16:42, 12 September 2013
Short description: | p@chr10:40655977..40656012, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:40655977..40656012, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.77e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.77e-14 | 23 |
neuron | 7.54e-09 | 33 |
neuronal stem cell | 7.54e-09 | 33 |
neuroblast | 7.54e-09 | 33 |
electrically signaling cell | 7.54e-09 | 33 |
electrically responsive cell | 5.87e-07 | 39 |
electrically active cell | 5.87e-07 | 39 |
neural cell | 6.65e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.