FFCP PHASE1:Mm9::chr11:31957762..31957784,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:31957762..31957784,+|id=chr11:31957762..31957784,+|ontology_enrichment_celltype=CL:0000117!4.08e-17!23;CL:0000337!4.08e-17!23;CL:0000540!3.83e-16!33;CL:0000047!3.83e-16!33;CL:0000031!3.83e-16!33;CL:0000404!3.83e-16!33;CL:0002319!4.83e-12!43;CL:0000393!5.31e-12!39;CL:0000211!5.31e-12!39;CL:0000221!1.61e-11!44;CL:0000133!1.61e-11!44;CL:0000055!7.12e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.32e-25,23;CL:0000337,4.32e-25,23;CL:0000540,1.39e-18,33;CL:0000047,1.39e-18,33;CL:0000031,1.39e-18,33;CL:0000404,1.39e-18,33;CL:0002319,2.58e-15,43;CL:0002609,3.39e-15,6;CL:0000393,3.85e-15,39;CL:0000211,3.85e-15,39;CL:0000221,7.11e-15,44;CL:0000133,7.11e-15,44;CL:0002612,1.26e-08,3;CL:0000120,5.12e-08,3;CL:0002608,6.43e-08,3;CL:0002321,6.90e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.37e-29!73;UBERON:0005743!1.37e-29!73;UBERON:0000073!3.43e-28!75;UBERON:0001016!3.43e-28!75;UBERON:0002020!8.12e-26!34;UBERON:0002346!2.51e-25!71;UBERON:0003075!2.51e-25!71;UBERON:0007284!2.51e-25!71;UBERON:0001049!3.63e-25!52;UBERON:0005068!3.63e-25!52;UBERON:0006241!3.63e-25!52;UBERON:0007135!3.63e-25!52;UBERON:0004121!8.57e-23!102;UBERON:0000924!8.57e-23!102;UBERON:0006601!8.57e-23!102;UBERON:0007811!1.90e-22!86;UBERON:0000955!7.27e-22!50;UBERON:0006238!7.27e-22!50;UBERON:0002791!1.32e-21!29;UBERON:0003528!1.32e-21!29;UBERON:0001893!1.32e-21!29;UBERON:0003080!3.90e-21!40;UBERON:0002616!3.98e-21!49;UBERON:0002780!1.34e-20!39;UBERON:0001890!1.34e-20!39;UBERON:0006240!1.34e-20!39;UBERON:0003056!9.33e-20!49;UBERON:0000153!1.38e-19!94;UBERON:0000033!1.63e-18!63;UBERON:0000956!8.77e-16!21;UBERON:0001869!8.77e-16!21;UBERON:0000203!8.77e-16!21;UBERON:0002619!2.08e-12!17;UBERON:0002021!4.20e-11!10;UBERON:0000411!4.20e-11!10;UBERON:0001950!4.20e-11!10;UBERON:0000064!4.17e-08!99;UBERON:0002420!5.73e-07!8;UBERON:0007245!5.73e-07!8;UBERON:0010009!5.73e-07!8;UBERON:0010011!5.73e-07!8;UBERON:0000454!5.73e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.20e-45,34;UBERON:0000956,9.20e-39,21;UBERON:0001869,9.20e-39,21;UBERON:0000203,9.20e-39,21;UBERON:0003528,3.75e-37,29;UBERON:0002791,3.75e-37,29;UBERON:0001893,3.75e-37,29;UBERON:0002619,2.30e-33,17;UBERON:0001017,2.14e-31,73;UBERON:0000073,8.09e-31,54;UBERON:0001016,2.16e-30,75;UBERON:0001049,9.24e-30,52;UBERON:0005068,9.24e-30,52;UBERON:0006241,9.24e-30,52;UBERON:0007135,9.24e-30,52;UBERON:0002780,5.41e-29,39;UBERON:0001890,5.41e-29,39;UBERON:0006240,5.41e-29,39;UBERON:0003080,3.84e-28,40;UBERON:0002021,1.03e-27,10;UBERON:0000411,1.03e-27,10;UBERON:0001950,1.03e-27,10;UBERON:0002616,8.26e-24,46;UBERON:0000955,3.40e-23,47;UBERON:0006238,3.40e-23,47;UBERON:0002346,4.19e-23,64;UBERON:0003075,4.19e-23,64;UBERON:0007284,4.19e-23,64;UBERON:0004121,1.18e-22,95;UBERON:0000924,1.18e-22,95;UBERON:0006601,1.18e-22,95;UBERON:0003056,4.84e-22,49;UBERON:0010371,1.52e-19,73;UBERON:0010314,2.56e-14,92;UBERON:0000025,1.92e-10,114;UBERON:0004111,2.21e-09,122;UBERON:0002257,1.26e-08,3;UBERON:0001948,1.51e-08,5;UBERON:0002315,1.51e-08,5;UBERON:0011216,1.59e-08,194;UBERON:0001954,1.85e-08,7;UBERON:0003022,1.85e-08,7;UBERON:0002421,1.85e-08,7;UBERON:0000349,1.85e-08,7;UBERON:0002600,1.85e-08,7;UBERON:0002240,3.99e-07,6;UBERON:0005174,3.99e-07,6;UBERON:0001137,3.99e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.513602189793617,0.0874204024189974,0,0.202475267389826,0,0.315462165358238,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87505128729943,0,0,0,0,0,0,2.02316460859598,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.7996195323289,5.40023753326763,2.73422449756797,0.571301968807607,1.76694832761291,2.08234358665422,1.53352753629178,1.83843757322004,0,1.40456071893706,0.921639199537461,0.923204014111357,2.56165402086747,0.52091337055676,0.837548997004143,0.56276261003168,2.44477196442896,2.65165726926301,2.42031857358475,3.16879057903011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.449371918214468,0.915001205637253,2.63874139437015,0.869121600961382,2.04572365864264,0.83115217823824,1.29793010454206,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,1.18586333383957,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0.713475270408282,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,1.00966449948148,0.685861259894999,0.907435666231565,0.877120926657772,0.577271049841977,0.701261413089414,0,0,0,0,0,0,0,0,0,10.1655331671072,6.90487854760765,11.4579102687879,14.9512268639008,8.22099023724771,9.06472676867641,2.70009000092722,6.30449684513909,6.34399372577886,7.24864436452548,0,0.798049746802062,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0,1.02860775715625,0,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0,0.429742108096597,0,0,0|short_description=p@chr11:31957762..31957784,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:31957762..31957784,+ | |||
|id=chr11:31957762..31957784,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.08e-17!23;CL:0000337!4.08e-17!23;CL:0000540!3.83e-16!33;CL:0000047!3.83e-16!33;CL:0000031!3.83e-16!33;CL:0000404!3.83e-16!33;CL:0002319!4.83e-12!43;CL:0000393!5.31e-12!39;CL:0000211!5.31e-12!39;CL:0000221!1.61e-11!44;CL:0000133!1.61e-11!44;CL:0000055!7.12e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.32e-25,23;CL:0000337,4.32e-25,23;CL:0000540,1.39e-18,33;CL:0000047,1.39e-18,33;CL:0000031,1.39e-18,33;CL:0000404,1.39e-18,33;CL:0002319,2.58e-15,43;CL:0002609,3.39e-15,6;CL:0000393,3.85e-15,39;CL:0000211,3.85e-15,39;CL:0000221,7.11e-15,44;CL:0000133,7.11e-15,44;CL:0002612,1.26e-08,3;CL:0000120,5.12e-08,3;CL:0002608,6.43e-08,3;CL:0002321,6.90e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.37e-29!73;UBERON:0005743!1.37e-29!73;UBERON:0000073!3.43e-28!75;UBERON:0001016!3.43e-28!75;UBERON:0002020!8.12e-26!34;UBERON:0002346!2.51e-25!71;UBERON:0003075!2.51e-25!71;UBERON:0007284!2.51e-25!71;UBERON:0001049!3.63e-25!52;UBERON:0005068!3.63e-25!52;UBERON:0006241!3.63e-25!52;UBERON:0007135!3.63e-25!52;UBERON:0004121!8.57e-23!102;UBERON:0000924!8.57e-23!102;UBERON:0006601!8.57e-23!102;UBERON:0007811!1.90e-22!86;UBERON:0000955!7.27e-22!50;UBERON:0006238!7.27e-22!50;UBERON:0002791!1.32e-21!29;UBERON:0003528!1.32e-21!29;UBERON:0001893!1.32e-21!29;UBERON:0003080!3.90e-21!40;UBERON:0002616!3.98e-21!49;UBERON:0002780!1.34e-20!39;UBERON:0001890!1.34e-20!39;UBERON:0006240!1.34e-20!39;UBERON:0003056!9.33e-20!49;UBERON:0000153!1.38e-19!94;UBERON:0000033!1.63e-18!63;UBERON:0000956!8.77e-16!21;UBERON:0001869!8.77e-16!21;UBERON:0000203!8.77e-16!21;UBERON:0002619!2.08e-12!17;UBERON:0002021!4.20e-11!10;UBERON:0000411!4.20e-11!10;UBERON:0001950!4.20e-11!10;UBERON:0000064!4.17e-08!99;UBERON:0002420!5.73e-07!8;UBERON:0007245!5.73e-07!8;UBERON:0010009!5.73e-07!8;UBERON:0010011!5.73e-07!8;UBERON:0000454!5.73e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.20e-45,34;UBERON:0000956,9.20e-39,21;UBERON:0001869,9.20e-39,21;UBERON:0000203,9.20e-39,21;UBERON:0003528,3.75e-37,29;UBERON:0002791,3.75e-37,29;UBERON:0001893,3.75e-37,29;UBERON:0002619,2.30e-33,17;UBERON:0001017,2.14e-31,73;UBERON:0000073,8.09e-31,54;UBERON:0001016,2.16e-30,75;UBERON:0001049,9.24e-30,52;UBERON:0005068,9.24e-30,52;UBERON:0006241,9.24e-30,52;UBERON:0007135,9.24e-30,52;UBERON:0002780,5.41e-29,39;UBERON:0001890,5.41e-29,39;UBERON:0006240,5.41e-29,39;UBERON:0003080,3.84e-28,40;UBERON:0002021,1.03e-27,10;UBERON:0000411,1.03e-27,10;UBERON:0001950,1.03e-27,10;UBERON:0002616,8.26e-24,46;UBERON:0000955,3.40e-23,47;UBERON:0006238,3.40e-23,47;UBERON:0002346,4.19e-23,64;UBERON:0003075,4.19e-23,64;UBERON:0007284,4.19e-23,64;UBERON:0004121,1.18e-22,95;UBERON:0000924,1.18e-22,95;UBERON:0006601,1.18e-22,95;UBERON:0003056,4.84e-22,49;UBERON:0010371,1.52e-19,73;UBERON:0010314,2.56e-14,92;UBERON:0000025,1.92e-10,114;UBERON:0004111,2.21e-09,122;UBERON:0002257,1.26e-08,3;UBERON:0001948,1.51e-08,5;UBERON:0002315,1.51e-08,5;UBERON:0011216,1.59e-08,194;UBERON:0001954,1.85e-08,7;UBERON:0003022,1.85e-08,7;UBERON:0002421,1.85e-08,7;UBERON:0000349,1.85e-08,7;UBERON:0002600,1.85e-08,7;UBERON:0002240,3.99e-07,6;UBERON:0005174,3.99e-07,6;UBERON:0001137,3.99e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.513602189793617,0.0874204024189974,0,0.202475267389826,0,0.315462165358238,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87505128729943,0,0,0,0,0,0,2.02316460859598,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.7996195323289,5.40023753326763,2.73422449756797,0.571301968807607,1.76694832761291,2.08234358665422,1.53352753629178,1.83843757322004,0,1.40456071893706,0.921639199537461,0.923204014111357,2.56165402086747,0.52091337055676,0.837548997004143,0.56276261003168,2.44477196442896,2.65165726926301,2.42031857358475,3.16879057903011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.449371918214468,0.915001205637253,2.63874139437015,0.869121600961382,2.04572365864264,0.83115217823824,1.29793010454206,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,1.18586333383957,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0.713475270408282,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,1.00966449948148,0.685861259894999,0.907435666231565,0.877120926657772,0.577271049841977,0.701261413089414,0,0,0,0,0,0,0,0,0,10.1655331671072,6.90487854760765,11.4579102687879,14.9512268639008,8.22099023724771,9.06472676867641,2.70009000092722,6.30449684513909,6.34399372577886,7.24864436452548,0,0.798049746802062,0.170733605754134,0,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.0574354689556133,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0,1.02860775715625,0,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr11:31957762..31957784,+ | |||
}} |
Revision as of 19:27, 12 September 2013
Short description: | p@chr11:31957762..31957784, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:31957762..31957784, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.32e-25 | 23 |
neuroblast (sensu Vertebrata) | 4.32e-25 | 23 |
neuron | 1.39e-18 | 33 |
neuronal stem cell | 1.39e-18 | 33 |
neuroblast | 1.39e-18 | 33 |
electrically signaling cell | 1.39e-18 | 33 |
neural cell | 2.58e-15 | 43 |
neuron of cerebral cortex | 3.39e-15 | 6 |
electrically responsive cell | 3.85e-15 | 39 |
electrically active cell | 3.85e-15 | 39 |
ectodermal cell | 7.11e-15 | 44 |
neurectodermal cell | 7.11e-15 | 44 |
neuron of the ventral spinal cord | 1.26e-08 | 3 |
granule cell | 5.12e-08 | 3 |
hippocampal neuron | 6.43e-08 | 3 |
embryonic cell | 6.90e-08 | 70 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.