FFCP PHASE1:Mm9::chr15:74762117..74762163,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:74762117..74762163,+|id=chr15:74762117..74762163,+|ontology_enrichment_celltype=CL:0000553!3.16e-09!6;CL:0000556!3.16e-09!6;CL:0000988!8.33e-07!32;CL:0002032!8.33e-07!32;CL:0000037!8.33e-07!32;CL:0000566!8.33e-07!32;CL:0000837!8.33e-07!32|ontology_enrichment_celltype_v019_2=CL:0000553,5.59e-24,6;CL:0000556,5.59e-24,6;CL:0000050,3.87e-16,9;CL:0002031,1.35e-12,25;CL:0000839,2.74e-11,13;CL:0000945,3.04e-10,1;CL:0000236,3.04e-10,1;CL:0000826,3.04e-10,1;CL:0000988,8.13e-10,32;CL:0002032,8.13e-10,32;CL:0000037,8.13e-10,32;CL:0000837,8.13e-10,32;CL:0000625,1.03e-09,1;CL:0000763,3.12e-09,16;CL:0000049,8.08e-08,19;CL:0002320,8.96e-07,46;CL:0000134,8.96e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.79e-21!48;UBERON:0002390!6.14e-19!45;UBERON:0003061!6.14e-19!45;UBERON:0004177!1.24e-14!29;UBERON:0002405!2.25e-12!70;UBERON:0002370!2.51e-12!23;UBERON:0000974!2.51e-12!23;UBERON:0004807!2.51e-12!23;UBERON:0005058!2.51e-12!23;UBERON:0003351!2.51e-12!23;UBERON:0009113!2.51e-12!23;UBERON:0003295!2.51e-12!23;UBERON:0009722!2.51e-12!23;UBERON:0005562!2.51e-12!23;UBERON:0007690!2.51e-12!23;UBERON:0006562!1.12e-11!24;UBERON:0003408!1.12e-11!24;UBERON:0001557!1.12e-11!24;UBERON:0001042!1.12e-11!24;UBERON:0008814!1.12e-11!24;UBERON:0009145!1.12e-11!24;UBERON:0003081!1.29e-11!88;UBERON:0000072!1.35e-11!27;UBERON:0000065!2.91e-11!41;UBERON:0001004!6.93e-11!42;UBERON:0000063!3.69e-08!35|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0001474,3.57e-10,22;UBERON:0004765,3.57e-10,22;UBERON:0001434,3.57e-10,22;UBERON:0002371,3.12e-09,16;UBERON:0002204,5.25e-07,32;UBERON:0002384,8.96e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0.985521055061667,0,0.513653904676515,0,0.513602189793617,0,1.66554880907831,0.809901069559304,0,6.62470547252299,7.12995054749842,4.2438965179803,0,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,1.76469446409304,0,0,0,0,0,0,0,0,0,0,0,5.03347818173209,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,10.3575153458869,0,0,0,0,0,0,0,0,0.86759614151947,1.76922110389975,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0,0,1.36696704638282,0,0,0,0.956859594047176,0.915112692826091,0.339956859987711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.590758108698309,0.100966449948148,0.228620419965,0.403304740547362,0.877120926657772,0.288635524920988,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr15:74762117..74762163,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:74762117..74762163,+ | |||
|id=chr15:74762117..74762163,+ | |||
|ontology_enrichment_celltype=CL:0000553!3.16e-09!6;CL:0000556!3.16e-09!6;CL:0000988!8.33e-07!32;CL:0002032!8.33e-07!32;CL:0000037!8.33e-07!32;CL:0000566!8.33e-07!32;CL:0000837!8.33e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.59e-24,6;CL:0000556,5.59e-24,6;CL:0000050,3.87e-16,9;CL:0002031,1.35e-12,25;CL:0000839,2.74e-11,13;CL:0000945,3.04e-10,1;CL:0000236,3.04e-10,1;CL:0000826,3.04e-10,1;CL:0000988,8.13e-10,32;CL:0002032,8.13e-10,32;CL:0000037,8.13e-10,32;CL:0000837,8.13e-10,32;CL:0000625,1.03e-09,1;CL:0000763,3.12e-09,16;CL:0000049,8.08e-08,19;CL:0002320,8.96e-07,46;CL:0000134,8.96e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.79e-21!48;UBERON:0002390!6.14e-19!45;UBERON:0003061!6.14e-19!45;UBERON:0004177!1.24e-14!29;UBERON:0002405!2.25e-12!70;UBERON:0002370!2.51e-12!23;UBERON:0000974!2.51e-12!23;UBERON:0004807!2.51e-12!23;UBERON:0005058!2.51e-12!23;UBERON:0003351!2.51e-12!23;UBERON:0009113!2.51e-12!23;UBERON:0003295!2.51e-12!23;UBERON:0009722!2.51e-12!23;UBERON:0005562!2.51e-12!23;UBERON:0007690!2.51e-12!23;UBERON:0006562!1.12e-11!24;UBERON:0003408!1.12e-11!24;UBERON:0001557!1.12e-11!24;UBERON:0001042!1.12e-11!24;UBERON:0008814!1.12e-11!24;UBERON:0009145!1.12e-11!24;UBERON:0003081!1.29e-11!88;UBERON:0000072!1.35e-11!27;UBERON:0000065!2.91e-11!41;UBERON:0001004!6.93e-11!42;UBERON:0000063!3.69e-08!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0001474,3.57e-10,22;UBERON:0004765,3.57e-10,22;UBERON:0001434,3.57e-10,22;UBERON:0002371,3.12e-09,16;UBERON:0002204,5.25e-07,32;UBERON:0002384,8.96e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.985521055061667,0,0.513653904676515,0,0.513602189793617,0,1.66554880907831,0.809901069559304,0,6.62470547252299,7.12995054749842,4.2438965179803,0,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,1.76469446409304,0,0,0,0,0,0,0,0,0,0,0,5.03347818173209,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,10.3575153458869,0,0,0,0,0,0,0,0,0.86759614151947,1.76922110389975,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0,0,1.36696704638282,0,0,0,0.956859594047176,0.915112692826091,0.339956859987711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.590758108698309,0.100966449948148,0.228620419965,0.403304740547362,0.877120926657772,0.288635524920988,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr15:74762117..74762163,+ | |||
}} |
Revision as of 10:52, 13 September 2013
Short description: | p@chr15:74762117..74762163, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:74762117..74762163, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.59e-24 | 6 |
megakaryocyte | 5.59e-24 | 6 |
megakaryocyte-erythroid progenitor cell | 3.87e-16 | 9 |
hematopoietic lineage restricted progenitor cell | 1.35e-12 | 25 |
myeloid lineage restricted progenitor cell | 2.74e-11 | 13 |
lymphocyte of B lineage | 3.04e-10 | 1 |
B cell | 3.04e-10 | 1 |
pro-B cell | 3.04e-10 | 1 |
hematopoietic cell | 8.13e-10 | 32 |
hematopoietic oligopotent progenitor cell | 8.13e-10 | 32 |
hematopoietic stem cell | 8.13e-10 | 32 |
hematopoietic multipotent progenitor cell | 8.13e-10 | 32 |
CD8-positive, alpha-beta T cell | 1.03e-09 | 1 |
myeloid cell | 3.12e-09 | 16 |
common myeloid progenitor | 8.08e-08 | 19 |
connective tissue cell | 8.96e-07 | 46 |
mesenchymal cell | 8.96e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.63e-10 | 1 |
axillary lymph node | 1.63e-10 | 1 |
peripheral lymph node | 1.63e-10 | 1 |
shoulder | 1.63e-10 | 1 |
bone element | 3.57e-10 | 22 |
skeletal element | 3.57e-10 | 22 |
skeletal system | 3.57e-10 | 22 |
bone marrow | 3.12e-09 | 16 |
musculoskeletal system | 5.25e-07 | 32 |
connective tissue | 8.96e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.