FFCP PHASE1:Mm9::chr11:106474346..106474366,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21763|HGNC=|MCL_coexpression_id=0|UniProt=Q6ZPJ0|association_with_transcript=-102bp_to_ENSMUST00000042780,NM_198292,uc007lzc.1_5end|description=CAGE_peak_7_at_Tex2_5end|id=chr11:106474346..106474366,-|ontology_enrichment_celltype=CL:0000117!1.72e-13!23;CL:0000337!1.72e-13!23;CL:0000393!1.93e-10!39;CL:0000211!1.93e-10!39;CL:0000540!7.37e-10!33;CL:0000047!7.37e-10!33;CL:0000031!7.37e-10!33;CL:0000404!7.37e-10!33;CL:0000055!9.25e-08!50;CL:0002319!1.75e-07!43;CL:0000221!4.95e-07!44;CL:0000133!4.95e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-31,23;CL:0000337,2.66e-31,23;CL:0000540,1.14e-20,33;CL:0000047,1.14e-20,33;CL:0000031,1.14e-20,33;CL:0000404,1.14e-20,33;CL:0000393,6.58e-17,39;CL:0000211,6.58e-17,39;CL:0002319,5.50e-15,43;CL:0000221,1.47e-14,44;CL:0000133,1.47e-14,44;CL:0002610,1.12e-09,3;CL:0002614,2.61e-09,3;CL:0002613,1.80e-08,3;CL:0000120,2.74e-08,3;CL:0002321,8.70e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.55e-17!75;UBERON:0001016!2.55e-17!75;UBERON:0001017!4.57e-17!73;UBERON:0005743!4.57e-17!73;UBERON:0001049!1.57e-16!52;UBERON:0005068!1.57e-16!52;UBERON:0006241!1.57e-16!52;UBERON:0007135!1.57e-16!52;UBERON:0000955!8.19e-16!50;UBERON:0006238!8.19e-16!50;UBERON:0000033!1.70e-15!63;UBERON:0002616!3.92e-15!49;UBERON:0004121!1.53e-14!102;UBERON:0000924!1.53e-14!102;UBERON:0006601!1.53e-14!102;UBERON:0002020!3.45e-14!34;UBERON:0002346!5.67e-14!71;UBERON:0003075!5.67e-14!71;UBERON:0007284!5.67e-14!71;UBERON:0003056!5.44e-13!49;UBERON:0003080!2.58e-12!40;UBERON:0002780!1.04e-11!39;UBERON:0001890!1.04e-11!39;UBERON:0006240!1.04e-11!39;UBERON:0002791!2.33e-11!29;UBERON:0003528!2.33e-11!29;UBERON:0001893!2.33e-11!29;UBERON:0007811!1.26e-10!86;UBERON:0000153!3.60e-09!94;UBERON:0002420!7.29e-07!8;UBERON:0007245!7.29e-07!8;UBERON:0010009!7.29e-07!8;UBERON:0010011!7.29e-07!8;UBERON:0000454!7.29e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.59e-24,73;UBERON:0001016,3.45e-23,75;UBERON:0000073,3.70e-22,54;UBERON:0002420,4.01e-21,8;UBERON:0007245,4.01e-21,8;UBERON:0010009,4.01e-21,8;UBERON:0010011,4.01e-21,8;UBERON:0000454,4.01e-21,8;UBERON:0001049,1.61e-18,52;UBERON:0005068,1.61e-18,52;UBERON:0006241,1.61e-18,52;UBERON:0007135,1.61e-18,52;UBERON:0004121,4.13e-17,95;UBERON:0000924,4.13e-17,95;UBERON:0006601,4.13e-17,95;UBERON:0002020,4.48e-17,34;UBERON:0000955,1.25e-14,47;UBERON:0006238,1.25e-14,47;UBERON:0002346,3.44e-14,64;UBERON:0003075,3.44e-14,64;UBERON:0007284,3.44e-14,64;UBERON:0000369,2.04e-13,5;UBERON:0002435,2.04e-13,5;UBERON:0000204,2.04e-13,5;UBERON:0010082,2.04e-13,5;UBERON:0002616,3.92e-13,46;UBERON:0003528,6.41e-13,29;UBERON:0002791,6.41e-13,29;UBERON:0001893,6.41e-13,29;UBERON:0003080,5.74e-12,40;UBERON:0010371,7.01e-12,73;UBERON:0002950,1.25e-11,4;UBERON:0001891,1.25e-11,4;UBERON:0009616,1.25e-11,4;UBERON:0010286,1.25e-11,4;UBERON:0002780,1.29e-10,39;UBERON:0001890,1.29e-10,39;UBERON:0006240,1.29e-10,39;UBERON:0004684,1.12e-09,3;UBERON:0002275,1.12e-09,3;UBERON:0002038,2.61e-09,3;UBERON:0009663,2.61e-09,3;UBERON:0009661,2.61e-09,3;UBERON:0000125,2.61e-09,3;UBERON:0002308,2.61e-09,3;UBERON:0003056,3.42e-09,49;UBERON:0010314,1.69e-08,92;UBERON:0002240,7.25e-08,6;UBERON:0005174,7.25e-08,6;UBERON:0001137,7.25e-08,6;UBERON:0003076,9.69e-08,12;UBERON:0003057,9.69e-08,12|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,8.24919914465377,0,0.261199789138935,0,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0.85960031981627,0.515672092277442,1.41621522601718,1.5869729378161,1.26766280701236,0,0.889294796111139,0,0,0.7104801149461,0,0,1.14058573539325,0.945041568321835,0.420649922702764,3.14216082844184,0.441737081903227,0.489963196859816,1.53352753629178,0,2.20231761998777,2.29837208553338,2.91852413186863,1.71452174049252,1.73826522844578,1.04182674111352,2.79182999001381,1.68828783009504,2.13917546887534,0.589257170947335,1.85083185038834,1.86399445825301,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,1.64769703345305,1.83000241127451,1.7591609295801,1.39059456153821,0.511430914660661,2.28566849015516,0.973447578406546,0.101839363850316,0,0.252722758433675,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.512454881139399,0.187403449119458,0.776110112217047,0,0.378212160335639,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0,0.268273401399619,0.233530684734339,0.16455984991348,0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| ||
|EntrezGene=21763 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q6ZPJ0 | |||
|association_with_transcript=-102bp_to_ENSMUST00000042780,NM_198292,uc007lzc.1_5end | |||
|description=CAGE_peak_7_at_Tex2_5end | |||
|id=chr11:106474346..106474366,- | |||
|ontology_enrichment_celltype=CL:0000117!1.72e-13!23;CL:0000337!1.72e-13!23;CL:0000393!1.93e-10!39;CL:0000211!1.93e-10!39;CL:0000540!7.37e-10!33;CL:0000047!7.37e-10!33;CL:0000031!7.37e-10!33;CL:0000404!7.37e-10!33;CL:0000055!9.25e-08!50;CL:0002319!1.75e-07!43;CL:0000221!4.95e-07!44;CL:0000133!4.95e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-31,23;CL:0000337,2.66e-31,23;CL:0000540,1.14e-20,33;CL:0000047,1.14e-20,33;CL:0000031,1.14e-20,33;CL:0000404,1.14e-20,33;CL:0000393,6.58e-17,39;CL:0000211,6.58e-17,39;CL:0002319,5.50e-15,43;CL:0000221,1.47e-14,44;CL:0000133,1.47e-14,44;CL:0002610,1.12e-09,3;CL:0002614,2.61e-09,3;CL:0002613,1.80e-08,3;CL:0000120,2.74e-08,3;CL:0002321,8.70e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.55e-17!75;UBERON:0001016!2.55e-17!75;UBERON:0001017!4.57e-17!73;UBERON:0005743!4.57e-17!73;UBERON:0001049!1.57e-16!52;UBERON:0005068!1.57e-16!52;UBERON:0006241!1.57e-16!52;UBERON:0007135!1.57e-16!52;UBERON:0000955!8.19e-16!50;UBERON:0006238!8.19e-16!50;UBERON:0000033!1.70e-15!63;UBERON:0002616!3.92e-15!49;UBERON:0004121!1.53e-14!102;UBERON:0000924!1.53e-14!102;UBERON:0006601!1.53e-14!102;UBERON:0002020!3.45e-14!34;UBERON:0002346!5.67e-14!71;UBERON:0003075!5.67e-14!71;UBERON:0007284!5.67e-14!71;UBERON:0003056!5.44e-13!49;UBERON:0003080!2.58e-12!40;UBERON:0002780!1.04e-11!39;UBERON:0001890!1.04e-11!39;UBERON:0006240!1.04e-11!39;UBERON:0002791!2.33e-11!29;UBERON:0003528!2.33e-11!29;UBERON:0001893!2.33e-11!29;UBERON:0007811!1.26e-10!86;UBERON:0000153!3.60e-09!94;UBERON:0002420!7.29e-07!8;UBERON:0007245!7.29e-07!8;UBERON:0010009!7.29e-07!8;UBERON:0010011!7.29e-07!8;UBERON:0000454!7.29e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.59e-24,73;UBERON:0001016,3.45e-23,75;UBERON:0000073,3.70e-22,54;UBERON:0002420,4.01e-21,8;UBERON:0007245,4.01e-21,8;UBERON:0010009,4.01e-21,8;UBERON:0010011,4.01e-21,8;UBERON:0000454,4.01e-21,8;UBERON:0001049,1.61e-18,52;UBERON:0005068,1.61e-18,52;UBERON:0006241,1.61e-18,52;UBERON:0007135,1.61e-18,52;UBERON:0004121,4.13e-17,95;UBERON:0000924,4.13e-17,95;UBERON:0006601,4.13e-17,95;UBERON:0002020,4.48e-17,34;UBERON:0000955,1.25e-14,47;UBERON:0006238,1.25e-14,47;UBERON:0002346,3.44e-14,64;UBERON:0003075,3.44e-14,64;UBERON:0007284,3.44e-14,64;UBERON:0000369,2.04e-13,5;UBERON:0002435,2.04e-13,5;UBERON:0000204,2.04e-13,5;UBERON:0010082,2.04e-13,5;UBERON:0002616,3.92e-13,46;UBERON:0003528,6.41e-13,29;UBERON:0002791,6.41e-13,29;UBERON:0001893,6.41e-13,29;UBERON:0003080,5.74e-12,40;UBERON:0010371,7.01e-12,73;UBERON:0002950,1.25e-11,4;UBERON:0001891,1.25e-11,4;UBERON:0009616,1.25e-11,4;UBERON:0010286,1.25e-11,4;UBERON:0002780,1.29e-10,39;UBERON:0001890,1.29e-10,39;UBERON:0006240,1.29e-10,39;UBERON:0004684,1.12e-09,3;UBERON:0002275,1.12e-09,3;UBERON:0002038,2.61e-09,3;UBERON:0009663,2.61e-09,3;UBERON:0009661,2.61e-09,3;UBERON:0000125,2.61e-09,3;UBERON:0002308,2.61e-09,3;UBERON:0003056,3.42e-09,49;UBERON:0010314,1.69e-08,92;UBERON:0002240,7.25e-08,6;UBERON:0005174,7.25e-08,6;UBERON:0001137,7.25e-08,6;UBERON:0003076,9.69e-08,12;UBERON:0003057,9.69e-08,12 | |||
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|short_description=p7@Tex2 | |||
}} |
Revision as of 18:33, 12 September 2013
Short description: | p7@Tex2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tex2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -102bp_to_ENSMUST00000042780, NM_198292, uc007lzc.1_5end |
EntrezGene: | Tex2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.66e-31 | 23 |
neuroblast (sensu Vertebrata) | 2.66e-31 | 23 |
neuron | 1.14e-20 | 33 |
neuronal stem cell | 1.14e-20 | 33 |
neuroblast | 1.14e-20 | 33 |
electrically signaling cell | 1.14e-20 | 33 |
electrically responsive cell | 6.58e-17 | 39 |
electrically active cell | 6.58e-17 | 39 |
neural cell | 5.50e-15 | 43 |
ectodermal cell | 1.47e-14 | 44 |
neurectodermal cell | 1.47e-14 | 44 |
raphe nuclei neuron | 1.12e-09 | 3 |
neuron of the substantia nigra | 2.61e-09 | 3 |
striatum neuron | 1.80e-08 | 3 |
granule cell | 2.74e-08 | 3 |
embryonic cell | 8.70e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.