FFCP PHASE1:Mm9::chr6:39508155..39508168,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=209773|HGNC=|UniProt=Q8C4S8,D3Z1C6|association_with_transcript=-289bp_to_ENSMUST00000036877,ENSMUST00000154149_5end|description=CAGE_peak_10_at_Dennd2a_5end|id=chr6:39508155..39508168,-|ontology_enrichment_celltype=CL:0000349!3.20e-07!3;CL:0000351!3.20e-07!3|ontology_enrichment_celltype_v019_2=CL:0000217,3.41e-30,2;CL:0000328,3.41e-30,2;CL:0002573,3.41e-30,2;CL:0002376,3.41e-30,2;CL:0000218,3.41e-30,2;CL:0000692,3.41e-30,2;CL:0002377,3.41e-30,2;CL:0002375,3.41e-30,2;CL:0000215,1.59e-20,3;CL:0000349,6.06e-20,3;CL:0000351,6.06e-20,3;CL:0000333,7.47e-07,10;CL:0000095,7.47e-07,10;CL:0000243,7.47e-07,10;CL:0000123,7.47e-07,10;CL:0000125,7.47e-07,10;CL:0000030,7.47e-07,10;CL:0000339,7.47e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005795!8.71e-09!4;UBERON:0000995!8.71e-09!4;UBERON:0000474!2.01e-07!9;UBERON:0005631!2.67e-07!3;UBERON:0000478!2.67e-07!3;UBERON:0000158!2.67e-07!3;UBERON:0000358!3.20e-07!3;UBERON:0000307!3.20e-07!3;UBERON:0003975!5.49e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.41e-30,2;UBERON:0003124,3.41e-30,2;UBERON:0004340,3.41e-30,2;UBERON:0005631,1.59e-20,3;UBERON:0000478,1.59e-20,3;UBERON:0000158,1.59e-20,3;UBERON:0000358,6.06e-20,3;UBERON:0000307,6.06e-20,3;UBERON:0007010,6.06e-20,3;UBERON:0005795,1.13e-15,4;UBERON:0000995,1.13e-15,4;UBERON:0003975,9.46e-13,5;UBERON:0003134,2.44e-08,8;UBERON:0004175,1.63e-07,9;UBERON:0000474,1.63e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0.186399445825301,1.4387976733305,4.53429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0,3.98941903708308,2.1183207086382,0,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.887943813496259,1.34570784914214,1.00730769818447,0,0.750729901804728,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421|short_description=p10@Dennd2a}} | ||
|EntrezGene=209773 | |||
|HGNC= | |||
|UniProt=Q8C4S8,D3Z1C6 | |||
|association_with_transcript=-289bp_to_ENSMUST00000036877,ENSMUST00000154149_5end | |||
|description=CAGE_peak_10_at_Dennd2a_5end | |||
|id=chr6:39508155..39508168,- | |||
|ontology_enrichment_celltype=CL:0000349!3.20e-07!3;CL:0000351!3.20e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,3.41e-30,2;CL:0000328,3.41e-30,2;CL:0002573,3.41e-30,2;CL:0002376,3.41e-30,2;CL:0000218,3.41e-30,2;CL:0000692,3.41e-30,2;CL:0002377,3.41e-30,2;CL:0002375,3.41e-30,2;CL:0000215,1.59e-20,3;CL:0000349,6.06e-20,3;CL:0000351,6.06e-20,3;CL:0000333,7.47e-07,10;CL:0000095,7.47e-07,10;CL:0000243,7.47e-07,10;CL:0000123,7.47e-07,10;CL:0000125,7.47e-07,10;CL:0000030,7.47e-07,10;CL:0000339,7.47e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005795!8.71e-09!4;UBERON:0000995!8.71e-09!4;UBERON:0000474!2.01e-07!9;UBERON:0005631!2.67e-07!3;UBERON:0000478!2.67e-07!3;UBERON:0000158!2.67e-07!3;UBERON:0000358!3.20e-07!3;UBERON:0000307!3.20e-07!3;UBERON:0003975!5.49e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.41e-30,2;UBERON:0003124,3.41e-30,2;UBERON:0004340,3.41e-30,2;UBERON:0005631,1.59e-20,3;UBERON:0000478,1.59e-20,3;UBERON:0000158,1.59e-20,3;UBERON:0000358,6.06e-20,3;UBERON:0000307,6.06e-20,3;UBERON:0007010,6.06e-20,3;UBERON:0005795,1.13e-15,4;UBERON:0000995,1.13e-15,4;UBERON:0003975,9.46e-13,5;UBERON:0003134,2.44e-08,8;UBERON:0004175,1.63e-07,9;UBERON:0000474,1.63e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0.186399445825301,1.4387976733305,4.53429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0,3.98941903708308,2.1183207086382,0,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.887943813496259,1.34570784914214,1.00730769818447,0,0.750729901804728,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p10@Dennd2a | |||
}} |
Revision as of 09:47, 14 September 2013
Short description: | p10@Dennd2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Dennd2a_5end |
Coexpression cluster: | NA |
Association with transcript: | -289bp_to_ENSMUST00000036877, ENSMUST00000154149_5end |
EntrezGene: | Dennd2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 3.41e-30 | 2 |
myelin accumulating cell | 3.41e-30 | 2 |
Schwann cell | 3.41e-30 | 2 |
non-myelinating Schwann cell | 3.41e-30 | 2 |
myelinating Schwann cell;;Schwann cell | 3.41e-30 | 2 |
terminal Schwann cell | 3.41e-30 | 2 |
immature Schwann cell | 3.41e-30 | 2 |
Schwann cell precursor | 3.41e-30 | 2 |
barrier cell | 1.59e-20 | 3 |
extraembryonic cell | 6.06e-20 | 3 |
trophoblast cell | 6.06e-20 | 3 |
migratory neural crest cell | 7.47e-07 | 10 |
neuron associated cell | 7.47e-07 | 10 |
glial cell (sensu Vertebrata) | 7.47e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 7.47e-07 | 10 |
glial cell | 7.47e-07 | 10 |
glioblast | 7.47e-07 | 10 |
glioblast (sensu Vertebrata) | 7.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.41e-30 | 2 |
chorion | 3.41e-30 | 2 |
allantois | 3.41e-30 | 2 |
extraembryonic membrane | 1.59e-20 | 3 |
extraembryonic structure | 1.59e-20 | 3 |
membranous layer | 1.59e-20 | 3 |
blastocyst | 6.06e-20 | 3 |
blastula | 6.06e-20 | 3 |
cleaving embryo | 6.06e-20 | 3 |
embryonic uterus | 1.13e-15 | 4 |
uterus | 1.13e-15 | 4 |
internal female genitalia | 9.46e-13 | 5 |
female reproductive organ | 2.44e-08 | 8 |
internal genitalia | 1.63e-07 | 9 |
female reproductive system | 1.63e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.