FFCP PHASE1:Mm9::chr6:115881956..115881981,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=212541|HGNC=|MCL_coexpression_id=16|UniProt=P15409|association_with_transcript=11bp_to_ENSMUST00000032471,NM_145383,uc009djk.1_5end|description=CAGE_peak_3_at_Rho_5end|id=chr6:115881956..115881981,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!5.40e-21!9;UBERON:0000019!5.40e-21!9;UBERON:0000047!5.40e-21!9;UBERON:0004088!5.40e-21!9;UBERON:0002104!5.40e-21!9;UBERON:0001456!5.40e-21!9;UBERON:0003072!5.40e-21!9;UBERON:0003071!5.40e-21!9;UBERON:0004128!5.40e-21!9;UBERON:0001444!3.39e-17!11;UBERON:0000020!9.06e-16!12;UBERON:0001032!9.06e-16!12;UBERON:0004456!9.06e-16!12;UBERON:0005085!1.46e-14!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.19e-22,9;UBERON:0000019,1.19e-22,9;UBERON:0000047,1.19e-22,9;UBERON:0010312,1.19e-22,9;UBERON:0004088,1.19e-22,9;UBERON:0002104,1.19e-22,9;UBERON:0001456,1.19e-22,9;UBERON:0003072,1.19e-22,9;UBERON:0004128,1.19e-22,9;UBERON:0003071,1.19e-22,9;UBERON:0001444,1.00e-18,11;UBERON:0000020,2.99e-17,12;UBERON:0001032,2.99e-17,12;UBERON:0004456,2.99e-17,12;UBERON:0000033,5.32e-16,13;UBERON:0005085,5.32e-16,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21786191324856,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.0425808504904,0,0,0,0,0.204109497453984,0.768682321709099,1.3118241438362,36.7358786449402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Rho}} | ||
|EntrezGene=212541 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|UniProt=P15409 | |||
|association_with_transcript=11bp_to_ENSMUST00000032471,NM_145383,uc009djk.1_5end | |||
|description=CAGE_peak_3_at_Rho_5end | |||
|id=chr6:115881956..115881981,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.40e-21!9;UBERON:0000019!5.40e-21!9;UBERON:0000047!5.40e-21!9;UBERON:0004088!5.40e-21!9;UBERON:0002104!5.40e-21!9;UBERON:0001456!5.40e-21!9;UBERON:0003072!5.40e-21!9;UBERON:0003071!5.40e-21!9;UBERON:0004128!5.40e-21!9;UBERON:0001444!3.39e-17!11;UBERON:0000020!9.06e-16!12;UBERON:0001032!9.06e-16!12;UBERON:0004456!9.06e-16!12;UBERON:0005085!1.46e-14!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.19e-22,9;UBERON:0000019,1.19e-22,9;UBERON:0000047,1.19e-22,9;UBERON:0010312,1.19e-22,9;UBERON:0004088,1.19e-22,9;UBERON:0002104,1.19e-22,9;UBERON:0001456,1.19e-22,9;UBERON:0003072,1.19e-22,9;UBERON:0004128,1.19e-22,9;UBERON:0003071,1.19e-22,9;UBERON:0001444,1.00e-18,11;UBERON:0000020,2.99e-17,12;UBERON:0001032,2.99e-17,12;UBERON:0004456,2.99e-17,12;UBERON:0000033,5.32e-16,13;UBERON:0005085,5.32e-16,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21786191324856,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.0425808504904,0,0,0,0,0.204109497453984,0.768682321709099,1.3118241438362,36.7358786449402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Rho | |||
}} |
Revision as of 08:36, 14 September 2013
Short description: | p3@Rho |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rho_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 11bp_to_ENSMUST00000032471, NM_145383, uc009djk.1_5end |
EntrezGene: | Rho |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.19e-22 | 9 |
camera-type eye | 1.19e-22 | 9 |
simple eye | 1.19e-22 | 9 |
immature eye | 1.19e-22 | 9 |
ocular region | 1.19e-22 | 9 |
visual system | 1.19e-22 | 9 |
face | 1.19e-22 | 9 |
optic cup | 1.19e-22 | 9 |
optic vesicle | 1.19e-22 | 9 |
eye primordium | 1.19e-22 | 9 |
subdivision of head | 1.00e-18 | 11 |
sense organ | 2.99e-17 | 12 |
sensory system | 2.99e-17 | 12 |
entire sense organ system | 2.99e-17 | 12 |
head | 5.32e-16 | 13 |
ectodermal placode | 5.32e-16 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.