FFCP PHASE1:Mm9::chr13:100205091..100205109,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100205091..100205109,-|id=chr13:100205091..100205109,-|ontology_enrichment_celltype=CL:0000540!4.94e-17!33;CL:0000047!4.94e-17!33;CL:0000031!4.94e-17!33;CL:0000404!4.94e-17!33;CL:0000117!1.50e-14!23;CL:0000337!1.50e-14!23;CL:0000393!4.01e-14!39;CL:0000211!4.01e-14!39;CL:0002319!4.96e-13!43;CL:0000221!1.02e-12!44;CL:0000133!1.02e-12!44;CL:0000055!1.56e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.35e-21,33;CL:0000047,2.35e-21,33;CL:0000031,2.35e-21,33;CL:0000404,2.35e-21,33;CL:0000117,1.48e-18,23;CL:0000337,1.48e-18,23;CL:0000393,8.87e-17,39;CL:0000211,8.87e-17,39;CL:0002319,2.18e-14,43;CL:0000221,9.25e-14,44;CL:0000133,9.25e-14,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.12e-29!73;UBERON:0005743!4.12e-29!73;UBERON:0000073!6.21e-29!75;UBERON:0001016!6.21e-29!75;UBERON:0002346!8.03e-27!71;UBERON:0003075!8.03e-27!71;UBERON:0007284!8.03e-27!71;UBERON:0004121!3.50e-25!102;UBERON:0000924!3.50e-25!102;UBERON:0006601!3.50e-25!102;UBERON:0001049!5.67e-22!52;UBERON:0005068!5.67e-22!52;UBERON:0006241!5.67e-22!52;UBERON:0007135!5.67e-22!52;UBERON:0000033!3.15e-21!63;UBERON:0000955!4.58e-21!50;UBERON:0006238!4.58e-21!50;UBERON:0003056!7.10e-21!49;UBERON:0002616!1.43e-20!49;UBERON:0003080!2.92e-18!40;UBERON:0002780!8.39e-18!39;UBERON:0001890!8.39e-18!39;UBERON:0006240!8.39e-18!39;UBERON:0002020!9.29e-18!34;UBERON:0002791!4.65e-15!29;UBERON:0003528!4.65e-15!29;UBERON:0001893!4.65e-15!29;UBERON:0000956!1.49e-10!21;UBERON:0001869!1.49e-10!21;UBERON:0000203!1.49e-10!21;UBERON:0007811!5.25e-09!86;UBERON:0002619!1.90e-08!17;UBERON:0000153!3.71e-08!94;UBERON:0000025!1.66e-07!114;UBERON:0000468!2.22e-07!333;UBERON:0002021!2.72e-07!10;UBERON:0000411!2.72e-07!10;UBERON:0001950!2.72e-07!10;UBERON:0004111!8.38e-07!122;UBERON:0000922!8.59e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.23e-35,73;UBERON:0001016,5.77e-34,75;UBERON:0002346,9.18e-33,64;UBERON:0003075,9.18e-33,64;UBERON:0007284,9.18e-33,64;UBERON:0004121,3.06e-30,95;UBERON:0000924,3.06e-30,95;UBERON:0006601,3.06e-30,95;UBERON:0000073,3.01e-29,54;UBERON:0001049,2.52e-27,52;UBERON:0005068,2.52e-27,52;UBERON:0006241,2.52e-27,52;UBERON:0007135,2.52e-27,52;UBERON:0010371,9.40e-26,73;UBERON:0003056,1.76e-25,49;UBERON:0010314,1.43e-24,92;UBERON:0000955,2.04e-23,47;UBERON:0006238,2.04e-23,47;UBERON:0002616,8.70e-23,46;UBERON:0002020,2.34e-22,34;UBERON:0003080,2.83e-22,40;UBERON:0002780,1.12e-21,39;UBERON:0001890,1.12e-21,39;UBERON:0006240,1.12e-21,39;UBERON:0003528,7.92e-19,29;UBERON:0002791,7.92e-19,29;UBERON:0001893,7.92e-19,29;UBERON:0000956,5.98e-13,21;UBERON:0001869,5.98e-13,21;UBERON:0000203,5.98e-13,21;UBERON:0002619,3.29e-10,17;UBERON:0002021,4.58e-09,10;UBERON:0000411,4.58e-09,10;UBERON:0001950,4.58e-09,10;UBERON:0000025,4.51e-08,114;UBERON:0002420,3.92e-07,8;UBERON:0007245,3.92e-07,8;UBERON:0010009,3.92e-07,8;UBERON:0010011,3.92e-07,8;UBERON:0000454,3.92e-07,8;UBERON:0004111,9.68e-07,122|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.550640256485045,0,0.218025156380447,0,0.777719596297134,0.55994568650145,2.87505128729943,0,0,0,1.02903774414379,0,0.515672092277442,7.89034197352431,17.4567023159771,7.60597684207415,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,10.3689612308478,14.4456354014909,5.8890989178387,1.99955689082663,2.65042249141936,7.10446635446733,7.28425579738596,3.67687514644008,8.8092704799511,14.0456071893706,21.6585211891303,6.85808696197008,16.4677758484337,10.939180781692,6.97957497503452,2.25105044012672,15.279824777681,26.5165726926301,23.3489556510529,10.8111678578674,0.530083353332288,0.906858721281426,0,0,0,0,0,0,0.421333260395256,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0,0.253359865475099,1.01104889002957,0,0,0.29688427812965,0.520455980298408,2.74018930480927,0.691846491768175,2.86373017049983,3.17489509266403,0.502666365318702,0,0.289198713839823,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,2.04946557908083,3.56059401582874,0,0,0,0,3.59497534571574,3.20250421973039,14.4502504929794,2.60736480288415,4.60287823194595,4.36354893575076,6.00292673350703,1.12023300235348,0.373220911830279,1.51633655060205,0.210441855886474,4.03373373184381,1.37941262660084,1.26043490863744,5.42537344208574,2.72145996605311,5.50888997224854,2.43624483855295,6.98499100995342,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,2.78047249225598,0,0.61734640922383,0,0,0,0,0.621377317606506,3.04883877975425,1.98068267607116,0.710234206755631,0.983821158737019,2.62254091908543,1.86027155800326,0.268273401399619,0.700592054203017,1.31647879930784,1.47750717671186,0.729619285912702,0,0.439100230582101,0.134206418760372,2.733769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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100205091..100205109,- | |||
|id=chr13:100205091..100205109,- | |||
|ontology_enrichment_celltype=CL:0000540!4.94e-17!33;CL:0000047!4.94e-17!33;CL:0000031!4.94e-17!33;CL:0000404!4.94e-17!33;CL:0000117!1.50e-14!23;CL:0000337!1.50e-14!23;CL:0000393!4.01e-14!39;CL:0000211!4.01e-14!39;CL:0002319!4.96e-13!43;CL:0000221!1.02e-12!44;CL:0000133!1.02e-12!44;CL:0000055!1.56e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.35e-21,33;CL:0000047,2.35e-21,33;CL:0000031,2.35e-21,33;CL:0000404,2.35e-21,33;CL:0000117,1.48e-18,23;CL:0000337,1.48e-18,23;CL:0000393,8.87e-17,39;CL:0000211,8.87e-17,39;CL:0002319,2.18e-14,43;CL:0000221,9.25e-14,44;CL:0000133,9.25e-14,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.12e-29!73;UBERON:0005743!4.12e-29!73;UBERON:0000073!6.21e-29!75;UBERON:0001016!6.21e-29!75;UBERON:0002346!8.03e-27!71;UBERON:0003075!8.03e-27!71;UBERON:0007284!8.03e-27!71;UBERON:0004121!3.50e-25!102;UBERON:0000924!3.50e-25!102;UBERON:0006601!3.50e-25!102;UBERON:0001049!5.67e-22!52;UBERON:0005068!5.67e-22!52;UBERON:0006241!5.67e-22!52;UBERON:0007135!5.67e-22!52;UBERON:0000033!3.15e-21!63;UBERON:0000955!4.58e-21!50;UBERON:0006238!4.58e-21!50;UBERON:0003056!7.10e-21!49;UBERON:0002616!1.43e-20!49;UBERON:0003080!2.92e-18!40;UBERON:0002780!8.39e-18!39;UBERON:0001890!8.39e-18!39;UBERON:0006240!8.39e-18!39;UBERON:0002020!9.29e-18!34;UBERON:0002791!4.65e-15!29;UBERON:0003528!4.65e-15!29;UBERON:0001893!4.65e-15!29;UBERON:0000956!1.49e-10!21;UBERON:0001869!1.49e-10!21;UBERON:0000203!1.49e-10!21;UBERON:0007811!5.25e-09!86;UBERON:0002619!1.90e-08!17;UBERON:0000153!3.71e-08!94;UBERON:0000025!1.66e-07!114;UBERON:0000468!2.22e-07!333;UBERON:0002021!2.72e-07!10;UBERON:0000411!2.72e-07!10;UBERON:0001950!2.72e-07!10;UBERON:0004111!8.38e-07!122;UBERON:0000922!8.59e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.23e-35,73;UBERON:0001016,5.77e-34,75;UBERON:0002346,9.18e-33,64;UBERON:0003075,9.18e-33,64;UBERON:0007284,9.18e-33,64;UBERON:0004121,3.06e-30,95;UBERON:0000924,3.06e-30,95;UBERON:0006601,3.06e-30,95;UBERON:0000073,3.01e-29,54;UBERON:0001049,2.52e-27,52;UBERON:0005068,2.52e-27,52;UBERON:0006241,2.52e-27,52;UBERON:0007135,2.52e-27,52;UBERON:0010371,9.40e-26,73;UBERON:0003056,1.76e-25,49;UBERON:0010314,1.43e-24,92;UBERON:0000955,2.04e-23,47;UBERON:0006238,2.04e-23,47;UBERON:0002616,8.70e-23,46;UBERON:0002020,2.34e-22,34;UBERON:0003080,2.83e-22,40;UBERON:0002780,1.12e-21,39;UBERON:0001890,1.12e-21,39;UBERON:0006240,1.12e-21,39;UBERON:0003528,7.92e-19,29;UBERON:0002791,7.92e-19,29;UBERON:0001893,7.92e-19,29;UBERON:0000956,5.98e-13,21;UBERON:0001869,5.98e-13,21;UBERON:0000203,5.98e-13,21;UBERON:0002619,3.29e-10,17;UBERON:0002021,4.58e-09,10;UBERON:0000411,4.58e-09,10;UBERON:0001950,4.58e-09,10;UBERON:0000025,4.51e-08,114;UBERON:0002420,3.92e-07,8;UBERON:0007245,3.92e-07,8;UBERON:0010009,3.92e-07,8;UBERON:0010011,3.92e-07,8;UBERON:0000454,3.92e-07,8;UBERON:0004111,9.68e-07,122 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.550640256485045,0,0.218025156380447,0,0.777719596297134,0.55994568650145,2.87505128729943,0,0,0,1.02903774414379,0,0.515672092277442,7.89034197352431,17.4567023159771,7.60597684207415,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,10.3689612308478,14.4456354014909,5.8890989178387,1.99955689082663,2.65042249141936,7.10446635446733,7.28425579738596,3.67687514644008,8.8092704799511,14.0456071893706,21.6585211891303,6.85808696197008,16.4677758484337,10.939180781692,6.97957497503452,2.25105044012672,15.279824777681,26.5165726926301,23.3489556510529,10.8111678578674,0.530083353332288,0.906858721281426,0,0,0,0,0,0,0.421333260395256,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0,0.253359865475099,1.01104889002957,0,0,0.29688427812965,0.520455980298408,2.74018930480927,0.691846491768175,2.86373017049983,3.17489509266403,0.502666365318702,0,0.289198713839823,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,2.04946557908083,3.56059401582874,0,0,0,0,3.59497534571574,3.20250421973039,14.4502504929794,2.60736480288415,4.60287823194595,4.36354893575076,6.00292673350703,1.12023300235348,0.373220911830279,1.51633655060205,0.210441855886474,4.03373373184381,1.37941262660084,1.26043490863744,5.42537344208574,2.72145996605311,5.50888997224854,2.43624483855295,6.98499100995342,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,2.78047249225598,0,0.61734640922383,0,0,0,0,0.621377317606506,3.04883877975425,1.98068267607116,0.710234206755631,0.983821158737019,2.62254091908543,1.86027155800326,0.268273401399619,0.700592054203017,1.31647879930784,1.47750717671186,0.729619285912702,0,0.439100230582101,0.134206418760372,2.73376933133365,26.9610084433725,0,0,1.91959425481711,2.55460339046482,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,1.31759163779209,1.50801125280162,0,0.38992817423824,0.898819408654221,0.864552199498777,0,0.189667900953082,0.571242563048644,0,0.814605311381257,0.387904974335251,0.49095073923223,0.252946148497029,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,1.35796068620151,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,2.43611158613652,1.2756381492599,0.327726629431476,0.690739927463582,0.723245292907558,0,0,0,0,4.81651769963376,5.04010252346474,0.327869890753351,0.252470927204373,2.52406575533005,3.12350995437311,5.60100834105277,1.91175038362042,4.01037613348309,1.13230612315533,3.23848561339915,4.9683495844923,2.37172666767914,3.85585579706168,0.425820255624806,0.712262414669021,0.977321756121456,0.659880491890142,0,1.45668381692989,0,1.32023555829129,0,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,2.38307724027652,2.70091641046965,1.03486947026204,1.92903331528433,0.709360934569094,4.10248280484762,2.79733335023606,1.522324745573,0,0.21183207086382,0.441056796109924,0,0.322928853391811,0.0603129249281559,0,0,1.1659233465194,9.27126510052548,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,1.01659733563424,1.29606408986162,2.09088296014469,0.218362563746178,1.34864346384821,0.495920734352016,0.26175594198403,0.129614973291793,0,0.56369293868419,0.598066184175915,0,0.388902376688095,0.516639293910924,2.19642963138012,1.40828686374905,1.43224823328345,0.629156066554265,1.20792060413003,0.288030006257865,0,0,0.410843828659309,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0,0,0.201652370273681,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.717710852875806,0.671538465456314,0.772758376128762,0,0.183151624267265,0.214368379079066,1.00314420807073,12.9892923801925,12.4287813856938,16.6139698897425,7.90524638780963,6.85082519770642,4.5323633843382,5.40018000185445,11.7083512838297,8.15656336171568,5.69536342927002,5.08558003162466,1.99512436700516,1.36586884603307,3.16038732188782,1.67690530102386,0.919217542250071,2.00022055021454,1.44224540067226,0.962757628775446,1.01078884705519,0.760437899670719,1.69763707247469,2.24739617927718,1.28050304809739,0.976402972245426,0.952587382566147,1.97003354106254,2.31491064556446,1.23625770240992,2.35518272215036,1.71434626192708,4.2594193478241,1.66905332963125,1.45346416632329,1.88218760830661,1.94613598150856,2.19513567447327,2.10455769150274,2.30866993537965,1.12228454331548,1.30498519936592,3.84167481264697,4.09231043169689,1.23949472948773,1.15743966588685,2.74791635731741,1.16965804222704,0.859484216193193,0,0,0.463735671240843 | |||
|short_description=p@chr13:100205091..100205109,- | |||
}} |
Revision as of 23:41, 12 September 2013
Short description: | p@chr13:100205091..100205109, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100205091..100205109, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.35e-21 | 33 |
neuronal stem cell | 2.35e-21 | 33 |
neuroblast | 2.35e-21 | 33 |
electrically signaling cell | 2.35e-21 | 33 |
CNS neuron (sensu Vertebrata) | 1.48e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.48e-18 | 23 |
electrically responsive cell | 8.87e-17 | 39 |
electrically active cell | 8.87e-17 | 39 |
neural cell | 2.18e-14 | 43 |
ectodermal cell | 9.25e-14 | 44 |
neurectodermal cell | 9.25e-14 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.