FFCP PHASE1:Mm9::chr5:91069628..91069721,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73246|HGNC=|MCL_coexpression_id=1408|UniProt=|association_with_transcript=0bp_to_uc008ybf.1_5end|description=CAGE_peak_1_at_Rassf6_5end|id=chr5:91069628..91069721,-|ontology_enrichment_celltype=CL:0000066!9.05e-08!25|ontology_enrichment_celltype_v019_2=CL:0000066,6.44e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!9.00e-23!130;UBERON:0000925!9.00e-23!130;UBERON:0006595!9.00e-23!130;UBERON:0001007!5.86e-22!128;UBERON:0001555!5.86e-22!128;UBERON:0007026!5.86e-22!128;UBERON:0004921!1.10e-20!126;UBERON:0004185!1.10e-20!126;UBERON:0000160!1.23e-15!43;UBERON:0005409!3.59e-15!59;UBERON:0005177!4.99e-10!85;UBERON:0002365!3.07e-09!25;UBERON:0002330!3.07e-09!25;UBERON:0000344!3.55e-09!15;UBERON:0000077!1.08e-08!97;UBERON:0009854!1.65e-08!23;UBERON:0009856!1.65e-08!23;UBERON:0009569!2.12e-08!66;UBERON:0002107!5.87e-08!22;UBERON:0007499!5.87e-08!22;UBERON:0006925!5.87e-08!22;UBERON:0009497!5.87e-08!22;UBERON:0000015!5.87e-08!22;UBERON:0002423!5.87e-08!22;UBERON:0006235!5.87e-08!22;UBERON:0008835!5.87e-08!22;UBERON:0003894!5.87e-08!22;UBERON:0004161!5.87e-08!22;UBERON:0008836!5.87e-08!22;UBERON:0001242!5.91e-08!13;UBERON:0000060!5.91e-08!13;UBERON:0001262!5.91e-08!13;UBERON:0004786!5.91e-08!13;UBERON:0001041!1.11e-07!92;UBERON:0004923!4.17e-07!24;UBERON:0005172!4.60e-07!49;UBERON:0005173!4.60e-07!49;UBERON:0002417!4.60e-07!49;UBERON:0000916!4.60e-07!49;UBERON:0002100!7.32e-07!98;UBERON:0005911!8.93e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.88e-21,118;UBERON:0000925,5.88e-21,118;UBERON:0006595,5.88e-21,118;UBERON:0001007,3.85e-20,116;UBERON:0001555,3.85e-20,116;UBERON:0007026,3.85e-20,116;UBERON:0004921,7.46e-19,114;UBERON:0000160,3.86e-15,31;UBERON:0005409,4.63e-13,47;UBERON:0000344,7.44e-10,15;UBERON:0002365,1.24e-09,25;UBERON:0002330,1.24e-09,25;UBERON:0005177,3.52e-09,79;UBERON:0009854,7.66e-09,23;UBERON:0009856,7.66e-09,23;UBERON:0001242,1.59e-08,13;UBERON:0001262,1.59e-08,13;UBERON:0004786,1.59e-08,13;UBERON:0002107,3.02e-08,22;UBERON:0007499,3.02e-08,22;UBERON:0006925,3.02e-08,22;UBERON:0009497,3.02e-08,22;UBERON:0000015,3.02e-08,22;UBERON:0002423,3.02e-08,22;UBERON:0006235,3.02e-08,22;UBERON:0008835,3.02e-08,22;UBERON:0003894,3.02e-08,22;UBERON:0004161,3.02e-08,22;UBERON:0008836,3.02e-08,22;UBERON:0005911,1.21e-07,69;UBERON:0003929,1.59e-07,55|phase1_expression=2.40223270657191,42.574999732002,47.7749201359013,11.1911758183527,7.01254021924886,49.5243852140075,47.6569786814872,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,4.10100814965709,1.7824876368746,0.84877930359606,2.55129870453209,0,0,21.9189619226967,19.7291981717766,40.7704694521664,42.6454376197484,55.5915780329594,10.6413114895569,8.31699428207772,31.7074630237086,0,0,0,10.1098066912946,6.81562045969819,9.59595974433135,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.883474163806454,0,0,0,3.30347642998166,0.893811366596314,2.30409799884365,0.263772575460388,0.274462930807229,0,0.837548997004143,0,1.22238598221448,1.47314292736834,1.99320353118744,0.186399445825301,0,0,3.76823835312181,6.0229671388697,6.11974200336975,10.7940638327563,13.6453047664011,11.6486990645307,6.60088774619234,0,0,0,9.01397886570755,0,0,0,6.49473123033642,5.57391704045217,7.07734223020697,9.02052649780574,8.02707439306232,1.48442139064825,0.520455980298408,0.608930956624282,0.691846491768175,0.301445281105245,0.587943535678524,1.63366568728578,46.967043869531,19.0871151134283,0,0,0.220841518460394,0,16.775258509631,2.63502717310392,1.46612694769419,6.89734049063197,0,0,0.254140454146129,2.54644086988199,0.915001205637253,0.376963056338593,0,0.255715457330331,0.83115217823824,0.648965052271031,1.73126918545538,0.373220911830279,4.29628689337247,9.89076722666428,0.260240885925407,0,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0,5.17406741478031,0,0.189106080167819,0.351902248327898,0.657587197282725,0.556094498451196,1.74126083261083,1.4404749548556,0.796137067273973,0.702213187313235,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0,0.439100230582101,0.268412837520744,0.210289948564127,0.205809224758569,13.8775888853195,11.6358249331959,1.2797295032114,2.09013004674395,4.89696353023955,5.04208811558356,6.67134131534611,8.17970192284004,9.49058123089023,8.23494773620054,14.0747716928151,12.5342577385925,12.8676297498619,8.98819408654222,14.0489732418551,15.3338780405863,2.27601481143698,3.77020091612105,5.63538678365402,9.77526373657508,13.5766741017338,13.2556699592702,20.7415841767564,21.4034714570423,21.351826986427,24.0624469647511,13.6368208460088,2.8363667971736,3.93117990226406,1.79889689907883,4.26006254915856,6.51178331331525,3.8193877767213,0.575392274901621,9.40384315295205,10.7078951143352,14.376820652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| ||
|EntrezGene=73246 | |||
|HGNC= | |||
|MCL_coexpression_id=1408 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008ybf.1_5end | |||
|description=CAGE_peak_1_at_Rassf6_5end | |||
|id=chr5:91069628..91069721,- | |||
|ontology_enrichment_celltype=CL:0000066!9.05e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.44e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.00e-23!130;UBERON:0000925!9.00e-23!130;UBERON:0006595!9.00e-23!130;UBERON:0001007!5.86e-22!128;UBERON:0001555!5.86e-22!128;UBERON:0007026!5.86e-22!128;UBERON:0004921!1.10e-20!126;UBERON:0004185!1.10e-20!126;UBERON:0000160!1.23e-15!43;UBERON:0005409!3.59e-15!59;UBERON:0005177!4.99e-10!85;UBERON:0002365!3.07e-09!25;UBERON:0002330!3.07e-09!25;UBERON:0000344!3.55e-09!15;UBERON:0000077!1.08e-08!97;UBERON:0009854!1.65e-08!23;UBERON:0009856!1.65e-08!23;UBERON:0009569!2.12e-08!66;UBERON:0002107!5.87e-08!22;UBERON:0007499!5.87e-08!22;UBERON:0006925!5.87e-08!22;UBERON:0009497!5.87e-08!22;UBERON:0000015!5.87e-08!22;UBERON:0002423!5.87e-08!22;UBERON:0006235!5.87e-08!22;UBERON:0008835!5.87e-08!22;UBERON:0003894!5.87e-08!22;UBERON:0004161!5.87e-08!22;UBERON:0008836!5.87e-08!22;UBERON:0001242!5.91e-08!13;UBERON:0000060!5.91e-08!13;UBERON:0001262!5.91e-08!13;UBERON:0004786!5.91e-08!13;UBERON:0001041!1.11e-07!92;UBERON:0004923!4.17e-07!24;UBERON:0005172!4.60e-07!49;UBERON:0005173!4.60e-07!49;UBERON:0002417!4.60e-07!49;UBERON:0000916!4.60e-07!49;UBERON:0002100!7.32e-07!98;UBERON:0005911!8.93e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.88e-21,118;UBERON:0000925,5.88e-21,118;UBERON:0006595,5.88e-21,118;UBERON:0001007,3.85e-20,116;UBERON:0001555,3.85e-20,116;UBERON:0007026,3.85e-20,116;UBERON:0004921,7.46e-19,114;UBERON:0000160,3.86e-15,31;UBERON:0005409,4.63e-13,47;UBERON:0000344,7.44e-10,15;UBERON:0002365,1.24e-09,25;UBERON:0002330,1.24e-09,25;UBERON:0005177,3.52e-09,79;UBERON:0009854,7.66e-09,23;UBERON:0009856,7.66e-09,23;UBERON:0001242,1.59e-08,13;UBERON:0001262,1.59e-08,13;UBERON:0004786,1.59e-08,13;UBERON:0002107,3.02e-08,22;UBERON:0007499,3.02e-08,22;UBERON:0006925,3.02e-08,22;UBERON:0009497,3.02e-08,22;UBERON:0000015,3.02e-08,22;UBERON:0002423,3.02e-08,22;UBERON:0006235,3.02e-08,22;UBERON:0008835,3.02e-08,22;UBERON:0003894,3.02e-08,22;UBERON:0004161,3.02e-08,22;UBERON:0008836,3.02e-08,22;UBERON:0005911,1.21e-07,69;UBERON:0003929,1.59e-07,55 | |||
|phase1_expression=2.40223270657191,42.574999732002,47.7749201359013,11.1911758183527,7.01254021924886,49.5243852140075,47.6569786814872,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,4.10100814965709,1.7824876368746,0.84877930359606,2.55129870453209,0,0,21.9189619226967,19.7291981717766,40.7704694521664,42.6454376197484,55.5915780329594,10.6413114895569,8.31699428207772,31.7074630237086,0,0,0,10.1098066912946,6.81562045969819,9.59595974433135,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.883474163806454,0,0,0,3.30347642998166,0.893811366596314,2.30409799884365,0.263772575460388,0.274462930807229,0,0.837548997004143,0,1.22238598221448,1.47314292736834,1.99320353118744,0.186399445825301,0,0,3.76823835312181,6.0229671388697,6.11974200336975,10.7940638327563,13.6453047664011,11.6486990645307,6.60088774619234,0,0,0,9.01397886570755,0,0,0,6.49473123033642,5.57391704045217,7.07734223020697,9.02052649780574,8.02707439306232,1.48442139064825,0.520455980298408,0.608930956624282,0.691846491768175,0.301445281105245,0.587943535678524,1.63366568728578,46.967043869531,19.0871151134283,0,0,0.220841518460394,0,16.775258509631,2.63502717310392,1.46612694769419,6.89734049063197,0,0,0.254140454146129,2.54644086988199,0.915001205637253,0.376963056338593,0,0.255715457330331,0.83115217823824,0.648965052271031,1.73126918545538,0.373220911830279,4.29628689337247,9.89076722666428,0.260240885925407,0,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0,5.17406741478031,0,0.189106080167819,0.351902248327898,0.657587197282725,0.556094498451196,1.74126083261083,1.4404749548556,0.796137067273973,0.702213187313235,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.393528463494808,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0,0.439100230582101,0.268412837520744,0.210289948564127,0.205809224758569,13.8775888853195,11.6358249331959,1.2797295032114,2.09013004674395,4.89696353023955,5.04208811558356,6.67134131534611,8.17970192284004,9.49058123089023,8.23494773620054,14.0747716928151,12.5342577385925,12.8676297498619,8.98819408654222,14.0489732418551,15.3338780405863,2.27601481143698,3.77020091612105,5.63538678365402,9.77526373657508,13.5766741017338,13.2556699592702,20.7415841767564,21.4034714570423,21.351826986427,24.0624469647511,13.6368208460088,2.8363667971736,3.93117990226406,1.79889689907883,4.26006254915856,6.51178331331525,3.8193877767213,0.575392274901621,9.40384315295205,10.7078951143352,14.3768206527355,15.2577788544086,15.9139213288426,13.8918382870911,14.5311904952749,13.9908621195376,1.66277871149944,1.13694847062291,0.977789858652155,2.37643120085263,0.938760993154008,4.35516269348721,2.85652369063216,2.92700471786698,4.09851374676097,2.43611158613652,1.91345722388985,2.78567635016755,2.41758974612254,3.18227928879325,0,0,29.0140921081231,27.0418011378638,2.40825884981688,2.22702204525186,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,0,2.41298144854057,0.534196811001766,0.977321756121456,1.64970122972535,1.32745138339963,4.12727081463468,3.02323556964751,3.96070667487386,2.06711325016541,3.07435147943927,4.39328098385976,5.08947221268508,4.9909632973861,5.37262488490887,5.27093042874994,6.18813259489121,7.48967132658334,0,0.776152102696527,1.71469628025274,0.886701168211368,1.24858172321449,0.987294123612726,2.13125464380219,2.58138878870081,22.8778636532926,1.32317038832977,3.62749756471256,5.16686165426898,10.0119455380739,11.8178620563105,14.2802582778203,12.8251568117134,1.8542530201051,2.39219233116994,0.206386867963223,0.185194527369712,0.188368457004691,0.820165366326151,0.915112692826091,1.18984900995699,1.6794174278839,1.38199973804424,6.68269432610579,2.05618395827738,1.82987520414164,4.21220829205025,3.76358932826044,3.05707589244649,4.72025212346872,8.01738520535759,6.28214260761671,14.7761069552644,3.10669656543463,0,0.149516546043979,0,1.16670713006429,0.645799117388655,0,0.704143431874524,0.5208175393758,0,0.241584120826006,0.288030006257865,2.21207784439725,3.04087822935246,4.72470402958205,3.89762468933385,3.22248052201467,3.77494574084403,3.00488623799922,1.62458479892035,1.9183625490148,1.82896335972,1.41156659191577,1.8516997340553,2.02044867444692,1.75315353272353,7.25537227568676,0.443971906748129,0,0,12.3641340180602,0.563047426353546,3.6630324853453,4.28736758158132,0.501572104035363,0,0.920650473014354,0,0,0,0,0.675022500231806,0,1.35942722695261,0.51776031175182,0,0,0.682934423016537,1.45864030240976,2.30574478890781,0.735374033800057,2.66696073361938,3.09052585858341,2.88827288632634,3.79045817645696,3.29523089857312,2.45214243801899,2.43467919421694,2.04880487695582,2.12511235135769,2.85776214769844,2.31768651889711,2.12200142510076,0.412085900803307,2.64958056241915,2.74295401908332,2.48466128623072,2.86123427936785,2.47088908274958,2.72917203204459,2.28459441307527,3.65855945745545,2.36762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| |||
|short_description=p1@Rassf6 | |||
}} |
Revision as of 08:18, 14 September 2013
Short description: | p1@Rassf6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rassf6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1408 |
Association with transcript: | 0bp_to_uc008ybf.1_5end |
EntrezGene: | Rassf6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.44e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.88e-21 | 118 |
endoderm | 5.88e-21 | 118 |
presumptive endoderm | 5.88e-21 | 118 |
digestive system | 3.85e-20 | 116 |
digestive tract | 3.85e-20 | 116 |
primitive gut | 3.85e-20 | 116 |
subdivision of digestive tract | 7.46e-19 | 114 |
intestine | 3.86e-15 | 31 |
gastrointestinal system | 4.63e-13 | 47 |
mucosa | 7.44e-10 | 15 |
exocrine gland | 1.24e-09 | 25 |
exocrine system | 1.24e-09 | 25 |
trunk region element | 3.52e-09 | 79 |
digestive tract diverticulum | 7.66e-09 | 23 |
sac | 7.66e-09 | 23 |
intestinal mucosa | 1.59e-08 | 13 |
wall of intestine | 1.59e-08 | 13 |
gastrointestinal system mucosa | 1.59e-08 | 13 |
liver | 3.02e-08 | 22 |
epithelial sac | 3.02e-08 | 22 |
digestive gland | 3.02e-08 | 22 |
epithelium of foregut-midgut junction | 3.02e-08 | 22 |
anatomical boundary | 3.02e-08 | 22 |
hepatobiliary system | 3.02e-08 | 22 |
foregut-midgut junction | 3.02e-08 | 22 |
hepatic diverticulum | 3.02e-08 | 22 |
liver primordium | 3.02e-08 | 22 |
septum transversum | 3.02e-08 | 22 |
liver bud | 3.02e-08 | 22 |
endo-epithelium | 1.21e-07 | 69 |
gut epithelium | 1.59e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.