FFCP PHASE1:Mm9::chr16:96715418..96715439,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:96715418..96715439,+|id=chr16:96715418..96715439,+|ontology_enrichment_celltype=CL:0000117!2.04e-18!23;CL:0000337!2.04e-18!23;CL:0000221!1.94e-14!44;CL:0000133!1.94e-14!44;CL:0002319!1.22e-13!43;CL:0000540!2.55e-13!33;CL:0000047!2.55e-13!33;CL:0000031!2.55e-13!33;CL:0000404!2.55e-13!33;CL:0000055!1.51e-10!50;CL:0000393!3.56e-10!39;CL:0000211!3.56e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-14,23;CL:0000337,1.05e-14,23;CL:0002610,6.59e-11,3;CL:0000540,1.22e-09,33;CL:0000047,1.22e-09,33;CL:0000031,1.22e-09,33;CL:0000404,1.22e-09,33;CL:0000393,7.51e-08,39;CL:0000211,7.51e-08,39;CL:0002319,6.14e-07,43;CL:0002611,6.71e-07,2;CL:0000221,9.77e-07,44;CL:0000133,9.77e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.88e-32!73;UBERON:0005743!6.88e-32!73;UBERON:0000073!8.47e-32!75;UBERON:0001016!8.47e-32!75;UBERON:0000033!1.99e-29!63;UBERON:0004121!9.08e-29!102;UBERON:0000924!9.08e-29!102;UBERON:0006601!9.08e-29!102;UBERON:0001049!2.24e-28!52;UBERON:0005068!2.24e-28!52;UBERON:0006241!2.24e-28!52;UBERON:0007135!2.24e-28!52;UBERON:0002346!7.81e-28!71;UBERON:0003075!7.81e-28!71;UBERON:0007284!7.81e-28!71;UBERON:0002020!7.84e-28!34;UBERON:0000955!5.03e-27!50;UBERON:0006238!5.03e-27!50;UBERON:0002616!7.40e-26!49;UBERON:0002791!1.27e-22!29;UBERON:0003528!1.27e-22!29;UBERON:0001893!1.27e-22!29;UBERON:0003056!2.38e-20!49;UBERON:0003080!1.80e-18!40;UBERON:0007811!1.87e-18!86;UBERON:0002780!1.47e-17!39;UBERON:0001890!1.47e-17!39;UBERON:0006240!1.47e-17!39;UBERON:0000153!1.21e-15!94;UBERON:0000956!5.71e-15!21;UBERON:0001869!5.71e-15!21;UBERON:0000203!5.71e-15!21;UBERON:0002021!1.78e-13!10;UBERON:0000411!1.78e-13!10;UBERON:0001950!1.78e-13!10;UBERON:0002619!5.31e-12!17;UBERON:0003076!1.05e-10!12;UBERON:0003057!1.05e-10!12;UBERON:0002420!6.49e-09!8;UBERON:0007245!6.49e-09!8;UBERON:0010009!6.49e-09!8;UBERON:0010011!6.49e-09!8;UBERON:0000454!6.49e-09!8;UBERON:0004111!6.88e-08!122;UBERON:0000025!2.25e-07!114;UBERON:0002240!2.81e-07!6;UBERON:0005174!2.81e-07!6;UBERON:0001137!2.81e-07!6;UBERON:0002298!4.04e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.25e-32,10;UBERON:0000411,1.25e-32,10;UBERON:0001950,1.25e-32,10;UBERON:0000073,1.00e-30,54;UBERON:0002020,1.28e-27,34;UBERON:0001017,9.42e-24,73;UBERON:0001049,1.23e-23,52;UBERON:0005068,1.23e-23,52;UBERON:0006241,1.23e-23,52;UBERON:0007135,1.23e-23,52;UBERON:0001016,5.36e-23,75;UBERON:0002346,2.35e-20,64;UBERON:0003075,2.35e-20,64;UBERON:0007284,2.35e-20,64;UBERON:0003528,1.47e-19,29;UBERON:0002791,1.47e-19,29;UBERON:0001893,1.47e-19,29;UBERON:0000955,4.21e-19,47;UBERON:0006238,4.21e-19,47;UBERON:0004121,8.82e-19,95;UBERON:0000924,8.82e-19,95;UBERON:0006601,8.82e-19,95;UBERON:0002619,1.95e-18,17;UBERON:0010371,2.57e-17,73;UBERON:0002616,3.13e-17,46;UBERON:0002780,6.06e-16,39;UBERON:0001890,6.06e-16,39;UBERON:0006240,6.06e-16,39;UBERON:0003080,1.81e-15,40;UBERON:0000956,1.44e-14,21;UBERON:0001869,1.44e-14,21;UBERON:0000203,1.44e-14,21;UBERON:0003056,8.62e-14,49;UBERON:0010314,7.58e-13,92;UBERON:0004684,6.59e-11,3;UBERON:0002275,6.59e-11,3;UBERON:0001948,2.44e-10,5;UBERON:0002315,2.44e-10,5;UBERON:0003076,4.08e-09,12;UBERON:0003057,4.08e-09,12;UBERON:0002240,1.25e-08,6;UBERON:0005174,1.25e-08,6;UBERON:0001137,1.25e-08,6;UBERON:0000025,1.68e-08,114;UBERON:0004111,1.14e-07,122;UBERON:0002256,6.71e-07,2|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,1.14260393761521,1.76694832761291,0.244981598429908,0.0958454710182364,0,2.20231761998777,9.19348834213351,5.83704826373725,0.527545150920775,1.18933936683133,1.04182674111352,0.558365998002762,2.25105044012672,1.68078072554491,2.94628585473668,4.12877874317399,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,2.04946557908083,5.23616767033638,0,0,0,0,0.748953197024114,0.457500602818626,0.251308704225729,0.521472960576829,1.27857728665165,0.41557608911912,1.46017136760982,0,0.124406970610093,0,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,1.28206136987086,0,0,6.7770221114048,5.9842280745933,13.1765968091061,3.26521046453006,3.42541259885321,3.7769694869485,6.07520250208625,2.2516060161211,3.17199686288943,3.10656187051092,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0,0,0.441596760403192,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:96715418..96715439,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:96715418..96715439,+ | |||
|id=chr16:96715418..96715439,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.04e-18!23;CL:0000337!2.04e-18!23;CL:0000221!1.94e-14!44;CL:0000133!1.94e-14!44;CL:0002319!1.22e-13!43;CL:0000540!2.55e-13!33;CL:0000047!2.55e-13!33;CL:0000031!2.55e-13!33;CL:0000404!2.55e-13!33;CL:0000055!1.51e-10!50;CL:0000393!3.56e-10!39;CL:0000211!3.56e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-14,23;CL:0000337,1.05e-14,23;CL:0002610,6.59e-11,3;CL:0000540,1.22e-09,33;CL:0000047,1.22e-09,33;CL:0000031,1.22e-09,33;CL:0000404,1.22e-09,33;CL:0000393,7.51e-08,39;CL:0000211,7.51e-08,39;CL:0002319,6.14e-07,43;CL:0002611,6.71e-07,2;CL:0000221,9.77e-07,44;CL:0000133,9.77e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.88e-32!73;UBERON:0005743!6.88e-32!73;UBERON:0000073!8.47e-32!75;UBERON:0001016!8.47e-32!75;UBERON:0000033!1.99e-29!63;UBERON:0004121!9.08e-29!102;UBERON:0000924!9.08e-29!102;UBERON:0006601!9.08e-29!102;UBERON:0001049!2.24e-28!52;UBERON:0005068!2.24e-28!52;UBERON:0006241!2.24e-28!52;UBERON:0007135!2.24e-28!52;UBERON:0002346!7.81e-28!71;UBERON:0003075!7.81e-28!71;UBERON:0007284!7.81e-28!71;UBERON:0002020!7.84e-28!34;UBERON:0000955!5.03e-27!50;UBERON:0006238!5.03e-27!50;UBERON:0002616!7.40e-26!49;UBERON:0002791!1.27e-22!29;UBERON:0003528!1.27e-22!29;UBERON:0001893!1.27e-22!29;UBERON:0003056!2.38e-20!49;UBERON:0003080!1.80e-18!40;UBERON:0007811!1.87e-18!86;UBERON:0002780!1.47e-17!39;UBERON:0001890!1.47e-17!39;UBERON:0006240!1.47e-17!39;UBERON:0000153!1.21e-15!94;UBERON:0000956!5.71e-15!21;UBERON:0001869!5.71e-15!21;UBERON:0000203!5.71e-15!21;UBERON:0002021!1.78e-13!10;UBERON:0000411!1.78e-13!10;UBERON:0001950!1.78e-13!10;UBERON:0002619!5.31e-12!17;UBERON:0003076!1.05e-10!12;UBERON:0003057!1.05e-10!12;UBERON:0002420!6.49e-09!8;UBERON:0007245!6.49e-09!8;UBERON:0010009!6.49e-09!8;UBERON:0010011!6.49e-09!8;UBERON:0000454!6.49e-09!8;UBERON:0004111!6.88e-08!122;UBERON:0000025!2.25e-07!114;UBERON:0002240!2.81e-07!6;UBERON:0005174!2.81e-07!6;UBERON:0001137!2.81e-07!6;UBERON:0002298!4.04e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.25e-32,10;UBERON:0000411,1.25e-32,10;UBERON:0001950,1.25e-32,10;UBERON:0000073,1.00e-30,54;UBERON:0002020,1.28e-27,34;UBERON:0001017,9.42e-24,73;UBERON:0001049,1.23e-23,52;UBERON:0005068,1.23e-23,52;UBERON:0006241,1.23e-23,52;UBERON:0007135,1.23e-23,52;UBERON:0001016,5.36e-23,75;UBERON:0002346,2.35e-20,64;UBERON:0003075,2.35e-20,64;UBERON:0007284,2.35e-20,64;UBERON:0003528,1.47e-19,29;UBERON:0002791,1.47e-19,29;UBERON:0001893,1.47e-19,29;UBERON:0000955,4.21e-19,47;UBERON:0006238,4.21e-19,47;UBERON:0004121,8.82e-19,95;UBERON:0000924,8.82e-19,95;UBERON:0006601,8.82e-19,95;UBERON:0002619,1.95e-18,17;UBERON:0010371,2.57e-17,73;UBERON:0002616,3.13e-17,46;UBERON:0002780,6.06e-16,39;UBERON:0001890,6.06e-16,39;UBERON:0006240,6.06e-16,39;UBERON:0003080,1.81e-15,40;UBERON:0000956,1.44e-14,21;UBERON:0001869,1.44e-14,21;UBERON:0000203,1.44e-14,21;UBERON:0003056,8.62e-14,49;UBERON:0010314,7.58e-13,92;UBERON:0004684,6.59e-11,3;UBERON:0002275,6.59e-11,3;UBERON:0001948,2.44e-10,5;UBERON:0002315,2.44e-10,5;UBERON:0003076,4.08e-09,12;UBERON:0003057,4.08e-09,12;UBERON:0002240,1.25e-08,6;UBERON:0005174,1.25e-08,6;UBERON:0001137,1.25e-08,6;UBERON:0000025,1.68e-08,114;UBERON:0004111,1.14e-07,122;UBERON:0002256,6.71e-07,2 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,1.14260393761521,1.76694832761291,0.244981598429908,0.0958454710182364,0,2.20231761998777,9.19348834213351,5.83704826373725,0.527545150920775,1.18933936683133,1.04182674111352,0.558365998002762,2.25105044012672,1.68078072554491,2.94628585473668,4.12877874317399,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,2.04946557908083,5.23616767033638,0,0,0,0,0.748953197024114,0.457500602818626,0.251308704225729,0.521472960576829,1.27857728665165,0.41557608911912,1.46017136760982,0,0.124406970610093,0,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,1.28206136987086,0,0,6.7770221114048,5.9842280745933,13.1765968091061,3.26521046453006,3.42541259885321,3.7769694869485,6.07520250208625,2.2516060161211,3.17199686288943,3.10656187051092,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0,0,0.441596760403192,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:96715418..96715439,+ | |||
}} |
Revision as of 13:27, 13 September 2013
Short description: | p@chr16:96715418..96715439, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:96715418..96715439, + |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.05e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-14 | 23 |
raphe nuclei neuron | 6.59e-11 | 3 |
neuron | 1.22e-09 | 33 |
neuronal stem cell | 1.22e-09 | 33 |
neuroblast | 1.22e-09 | 33 |
electrically signaling cell | 1.22e-09 | 33 |
electrically responsive cell | 7.51e-08 | 39 |
electrically active cell | 7.51e-08 | 39 |
neural cell | 6.14e-07 | 43 |
neuron of the dorsal spinal cord | 6.71e-07 | 2 |
ectodermal cell | 9.77e-07 | 44 |
neurectodermal cell | 9.77e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.