FFCP PHASE1:Mm9::chr13:25361782..25361783,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22360|HGNC=|MCL_coexpression_id=93|UniProt=P97799|association_with_transcript=81bp_to_NM_009513,uc007pwx.2_5end|description=CAGE_peak_5_at_Nrsn1_5end|id=chr13:25361782..25361783,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.13e-21!50;UBERON:0006238!2.13e-21!50;UBERON:0002616!1.33e-19!49;UBERON:0001049!3.19e-18!52;UBERON:0005068!3.19e-18!52;UBERON:0006241!3.19e-18!52;UBERON:0007135!3.19e-18!52;UBERON:0003080!7.38e-18!40;UBERON:0002791!7.94e-18!29;UBERON:0003528!7.94e-18!29;UBERON:0001893!7.94e-18!29;UBERON:0002021!2.44e-17!10;UBERON:0000411!2.44e-17!10;UBERON:0001950!2.44e-17!10;UBERON:0002020!5.92e-17!34;UBERON:0002780!2.39e-16!39;UBERON:0001890!2.39e-16!39;UBERON:0006240!2.39e-16!39;UBERON:0001017!3.74e-16!73;UBERON:0005743!3.74e-16!73;UBERON:0000033!6.12e-16!63;UBERON:0000073!1.41e-15!75;UBERON:0001016!1.41e-15!75;UBERON:0000956!4.62e-14!21;UBERON:0001869!4.62e-14!21;UBERON:0000203!4.62e-14!21;UBERON:0003056!8.15e-14!49;UBERON:0002346!2.14e-13!71;UBERON:0003075!2.14e-13!71;UBERON:0007284!2.14e-13!71;UBERON:0002619!3.46e-12!17;UBERON:0004121!4.42e-11!102;UBERON:0000924!4.42e-11!102;UBERON:0006601!4.42e-11!102;UBERON:0007811!2.44e-10!86;UBERON:0000153!4.19e-10!94|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.79e-27,10;UBERON:0000411,1.79e-27,10;UBERON:0001950,1.79e-27,10;UBERON:0002619,4.60e-23,17;UBERON:0000956,1.03e-18,21;UBERON:0001869,1.03e-18,21;UBERON:0000203,1.03e-18,21;UBERON:0003528,1.36e-13,29;UBERON:0002791,1.36e-13,29;UBERON:0001893,1.36e-13,29;UBERON:0001851,1.55e-12,1;UBERON:0005889,1.55e-12,1;UBERON:0002020,1.31e-11,34;UBERON:0000955,2.24e-11,47;UBERON:0006238,2.24e-11,47;UBERON:0002780,3.95e-10,39;UBERON:0001890,3.95e-10,39;UBERON:0006240,3.95e-10,39;UBERON:0003080,7.06e-10,40;UBERON:0002616,1.36e-08,46;UBERON:0003056,4.58e-08,49;UBERON:0001049,1.34e-07,52;UBERON:0005068,1.34e-07,52;UBERON:0006241,1.34e-07,52;UBERON:0007135,1.34e-07,52;UBERON:0000073,2.57e-07,54;UBERON:0001017,2.72e-07,73;UBERON:0001016,4.29e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.255374676170375,0.614426133024974,0.131886287730194,0.0914876436024097,0,0,0,0.916789486660861,0.589257170947335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0.521472960576829,2.81287003063364,0,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,0,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.71868654031819,1.3748254587495,0,3.0215755895588,1.35004500046361,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p5@Nrsn1}} | ||
|EntrezGene=22360 | |||
|HGNC= | |||
|MCL_coexpression_id=93 | |||
|UniProt=P97799 | |||
|association_with_transcript=81bp_to_NM_009513,uc007pwx.2_5end | |||
|description=CAGE_peak_5_at_Nrsn1_5end | |||
|id=chr13:25361782..25361783,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.13e-21!50;UBERON:0006238!2.13e-21!50;UBERON:0002616!1.33e-19!49;UBERON:0001049!3.19e-18!52;UBERON:0005068!3.19e-18!52;UBERON:0006241!3.19e-18!52;UBERON:0007135!3.19e-18!52;UBERON:0003080!7.38e-18!40;UBERON:0002791!7.94e-18!29;UBERON:0003528!7.94e-18!29;UBERON:0001893!7.94e-18!29;UBERON:0002021!2.44e-17!10;UBERON:0000411!2.44e-17!10;UBERON:0001950!2.44e-17!10;UBERON:0002020!5.92e-17!34;UBERON:0002780!2.39e-16!39;UBERON:0001890!2.39e-16!39;UBERON:0006240!2.39e-16!39;UBERON:0001017!3.74e-16!73;UBERON:0005743!3.74e-16!73;UBERON:0000033!6.12e-16!63;UBERON:0000073!1.41e-15!75;UBERON:0001016!1.41e-15!75;UBERON:0000956!4.62e-14!21;UBERON:0001869!4.62e-14!21;UBERON:0000203!4.62e-14!21;UBERON:0003056!8.15e-14!49;UBERON:0002346!2.14e-13!71;UBERON:0003075!2.14e-13!71;UBERON:0007284!2.14e-13!71;UBERON:0002619!3.46e-12!17;UBERON:0004121!4.42e-11!102;UBERON:0000924!4.42e-11!102;UBERON:0006601!4.42e-11!102;UBERON:0007811!2.44e-10!86;UBERON:0000153!4.19e-10!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.79e-27,10;UBERON:0000411,1.79e-27,10;UBERON:0001950,1.79e-27,10;UBERON:0002619,4.60e-23,17;UBERON:0000956,1.03e-18,21;UBERON:0001869,1.03e-18,21;UBERON:0000203,1.03e-18,21;UBERON:0003528,1.36e-13,29;UBERON:0002791,1.36e-13,29;UBERON:0001893,1.36e-13,29;UBERON:0001851,1.55e-12,1;UBERON:0005889,1.55e-12,1;UBERON:0002020,1.31e-11,34;UBERON:0000955,2.24e-11,47;UBERON:0006238,2.24e-11,47;UBERON:0002780,3.95e-10,39;UBERON:0001890,3.95e-10,39;UBERON:0006240,3.95e-10,39;UBERON:0003080,7.06e-10,40;UBERON:0002616,1.36e-08,46;UBERON:0003056,4.58e-08,49;UBERON:0001049,1.34e-07,52;UBERON:0005068,1.34e-07,52;UBERON:0006241,1.34e-07,52;UBERON:0007135,1.34e-07,52;UBERON:0000073,2.57e-07,54;UBERON:0001017,2.72e-07,73;UBERON:0001016,4.29e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.255374676170375,0.614426133024974,0.131886287730194,0.0914876436024097,0,0,0,0.916789486660861,0.589257170947335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0.521472960576829,2.81287003063364,0,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,0,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.71868654031819,1.3748254587495,0,3.0215755895588,1.35004500046361,1.35096360967266,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Nrsn1 | |||
}} |
Revision as of 00:15, 13 September 2013
Short description: | p5@Nrsn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nrsn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | 81bp_to_NM_009513, uc007pwx.2_5end |
EntrezGene: | Nrsn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.79e-27 | 10 |
visual cortex | 1.79e-27 | 10 |
neocortex | 1.79e-27 | 10 |
regional part of cerebral cortex | 4.60e-23 | 17 |
cerebral cortex | 1.03e-18 | 21 |
cerebral hemisphere | 1.03e-18 | 21 |
pallium | 1.03e-18 | 21 |
brain grey matter | 1.36e-13 | 29 |
regional part of telencephalon | 1.36e-13 | 29 |
telencephalon | 1.36e-13 | 29 |
cortex | 1.55e-12 | 1 |
zygote cortex | 1.55e-12 | 1 |
gray matter | 1.31e-11 | 34 |
brain | 2.24e-11 | 47 |
future brain | 2.24e-11 | 47 |
regional part of forebrain | 3.95e-10 | 39 |
forebrain | 3.95e-10 | 39 |
future forebrain | 3.95e-10 | 39 |
anterior neural tube | 7.06e-10 | 40 |
regional part of brain | 1.36e-08 | 46 |
pre-chordal neural plate | 4.58e-08 | 49 |
neural tube | 1.34e-07 | 52 |
neural rod | 1.34e-07 | 52 |
future spinal cord | 1.34e-07 | 52 |
neural keel | 1.34e-07 | 52 |
regional part of nervous system | 2.57e-07 | 54 |
central nervous system | 2.72e-07 | 73 |
nervous system | 4.29e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.