FFCP PHASE1:Mm9::chr3:89539611..89539638,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=239|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:89539611..89539638,+|id=chr3:89539611..89539638,+|ontology_enrichment_celltype=CL:0002031!3.37e-10!25;CL:0000988!1.01e-07!32;CL:0002032!1.01e-07!32;CL:0000037!1.01e-07!32;CL:0000566!1.01e-07!32;CL:0000837!1.01e-07!32;CL:0000219!2.97e-07!54;CL:0000738!4.25e-07!17;CL:0002087!4.25e-07!17|ontology_enrichment_celltype_v019_2=CL:0000057,3.06e-23,1;CL:0000632,3.06e-23,1;CL:0002476,5.17e-12,2;CL:0000151,1.13e-08,3;CL:0000499,1.13e-08,3;CL:0000327,1.13e-08,3;CL:0002027,1.34e-08,3;CL:0002006,1.34e-08,3;CL:0002024,1.34e-08,3;CL:0000839,1.05e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,0.342401459862411,0.437102012094987,0.666219523631325,0.202475267389826,2.09868563438444,0.157731082679119,0.548457734422955,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0,0,0.837063261473815,0.7813353445238,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,0.335565212115473,0,0.672187598284928,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.638436690425939,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0.186399445825301,0.151452386666368,0,0.579728977403356,27.5335640634044,0,0,0.649776417447669,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0.359445373517761,0,0,0.149790639404823,0,0.376963056338593,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0.505157755894224,0,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0.345369963731791,0.289298117163023,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0,0.119372344003136,0,0.582961673259701,0,0,0,0,0,0.683471138605126,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0,0,1.5107877947794,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0.192075457214608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p@chr3:89539611..89539638,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=239 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:89539611..89539638,+ | |||
|id=chr3:89539611..89539638,+ | |||
|ontology_enrichment_celltype=CL:0002031!3.37e-10!25;CL:0000988!1.01e-07!32;CL:0002032!1.01e-07!32;CL:0000037!1.01e-07!32;CL:0000566!1.01e-07!32;CL:0000837!1.01e-07!32;CL:0000219!2.97e-07!54;CL:0000738!4.25e-07!17;CL:0002087!4.25e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.06e-23,1;CL:0000632,3.06e-23,1;CL:0002476,5.17e-12,2;CL:0000151,1.13e-08,3;CL:0000499,1.13e-08,3;CL:0000327,1.13e-08,3;CL:0002027,1.34e-08,3;CL:0002006,1.34e-08,3;CL:0002024,1.34e-08,3;CL:0000839,1.05e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,0.342401459862411,0.437102012094987,0.666219523631325,0.202475267389826,2.09868563438444,0.157731082679119,0.548457734422955,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0,0,0.837063261473815,0.7813353445238,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,0.335565212115473,0,0.672187598284928,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.638436690425939,0.153606533256243,0,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0.186399445825301,0.151452386666368,0,0.579728977403356,27.5335640634044,0,0,0.649776417447669,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0.359445373517761,0,0,0.149790639404823,0,0.376963056338593,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0.505157755894224,0,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0.345369963731791,0.289298117163023,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0,0.119372344003136,0,0.582961673259701,0,0,0,0,0,0.683471138605126,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0,0,0,1.5107877947794,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0.192075457214608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr3:89539611..89539638,+ | |||
}} |
Revision as of 02:52, 14 September 2013
Short description: | p@chr3:89539611..89539638, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:89539611..89539638, + |
Coexpression cluster: | MCL_coexpression_mm9:239 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.06e-23 | 1 |
hepatic stellate cell | 3.06e-23 | 1 |
bone marrow macrophage | 5.17e-12 | 2 |
secretory cell | 1.13e-08 | 3 |
stromal cell | 1.13e-08 | 3 |
extracellular matrix secreting cell | 1.13e-08 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 1.34e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.34e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.34e-08 | 3 |
myeloid lineage restricted progenitor cell | 1.05e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.