FFCP PHASE1:Mm9::chr1:66368306..66368313,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=17756|HGNC=|MCL_coexpression_id=13|UniProt=P20357|association_with_transcript=13bp_to_ENSMUST00000114013_5end|description=CAGE_peak_17_at_Mtap2_5end|id=chr1:66368306..66368313,+|ontology_enrichment_celltype=CL:0000117!2.32e-18!23;CL:0000337!2.32e-18!23;CL:0000540!3.66e-17!33;CL:0000047!3.66e-17!33;CL:0000031!3.66e-17!33;CL:0000404!3.66e-17!33;CL:0000393!6.75e-13!39;CL:0000211!6.75e-13!39;CL:0000221!1.94e-12!44;CL:0000133!1.94e-12!44;CL:0002319!3.25e-12!43;CL:0000055!4.34e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.86e-22,23;CL:0000337,1.86e-22,23;CL:0000540,1.30e-15,33;CL:0000047,1.30e-15,33;CL:0000031,1.30e-15,33;CL:0000404,1.30e-15,33;CL:0000393,2.19e-12,39;CL:0000211,2.19e-12,39;CL:0002319,9.54e-11,43;CL:0000221,2.19e-10,44;CL:0000133,2.19e-10,44;CL:0002609,4.37e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.49e-32!75;UBERON:0001016!3.49e-32!75;UBERON:0001017!1.23e-31!73;UBERON:0005743!1.23e-31!73;UBERON:0000033!2.87e-30!63;UBERON:0001049!1.12e-28!52;UBERON:0005068!1.12e-28!52;UBERON:0006241!1.12e-28!52;UBERON:0007135!1.12e-28!52;UBERON:0000955!6.33e-28!50;UBERON:0006238!6.33e-28!50;UBERON:0002346!6.83e-28!71;UBERON:0003075!6.83e-28!71;UBERON:0007284!6.83e-28!71;UBERON:0004121!4.59e-27!102;UBERON:0000924!4.59e-27!102;UBERON:0006601!4.59e-27!102;UBERON:0002616!4.59e-27!49;UBERON:0003056!1.66e-26!49;UBERON:0002020!1.55e-25!34;UBERON:0003080!1.93e-23!40;UBERON:0002780!1.63e-22!39;UBERON:0001890!1.63e-22!39;UBERON:0006240!1.63e-22!39;UBERON:0002791!3.12e-22!29;UBERON:0003528!3.12e-22!29;UBERON:0001893!3.12e-22!29;UBERON:0007811!5.48e-17!86;UBERON:0000956!2.21e-15!21;UBERON:0001869!2.21e-15!21;UBERON:0000203!2.21e-15!21;UBERON:0000153!5.33e-14!94;UBERON:0002619!3.61e-12!17;UBERON:0002021!2.25e-10!10;UBERON:0000411!2.25e-10!10;UBERON:0001950!2.25e-10!10;UBERON:0002420!5.06e-08!8;UBERON:0007245!5.06e-08!8;UBERON:0010009!5.06e-08!8;UBERON:0010011!5.06e-08!8;UBERON:0000454!5.06e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.52e-41,54;UBERON:0001017,5.62e-37,73;UBERON:0001049,3.39e-36,52;UBERON:0005068,3.39e-36,52;UBERON:0006241,3.39e-36,52;UBERON:0007135,3.39e-36,52;UBERON:0000955,3.95e-36,47;UBERON:0006238,3.95e-36,47;UBERON:0002020,9.97e-36,34;UBERON:0001016,1.09e-35,75;UBERON:0002616,1.02e-34,46;UBERON:0003528,4.49e-34,29;UBERON:0002791,4.49e-34,29;UBERON:0001893,4.49e-34,29;UBERON:0003080,1.71e-31,40;UBERON:0002346,5.58e-31,64;UBERON:0003075,5.58e-31,64;UBERON:0007284,5.58e-31,64;UBERON:0002780,5.74e-30,39;UBERON:0001890,5.74e-30,39;UBERON:0006240,5.74e-30,39;UBERON:0004121,1.17e-28,95;UBERON:0000924,1.17e-28,95;UBERON:0006601,1.17e-28,95;UBERON:0003056,9.15e-28,49;UBERON:0010371,6.80e-26,73;UBERON:0000956,2.72e-24,21;UBERON:0001869,2.72e-24,21;UBERON:0000203,2.72e-24,21;UBERON:0002619,5.42e-21,17;UBERON:0010314,1.92e-18,92;UBERON:0002021,5.82e-17,10;UBERON:0000411,5.82e-17,10;UBERON:0001950,5.82e-17,10;UBERON:0000025,3.20e-11,114;UBERON:0002420,1.22e-10,8;UBERON:0007245,1.22e-10,8;UBERON:0010009,1.22e-10,8;UBERON:0010011,1.22e-10,8;UBERON:0000454,1.22e-10,8;UBERON:0000369,5.47e-10,5;UBERON:0002435,5.47e-10,5;UBERON:0000204,5.47e-10,5;UBERON:0010082,5.47e-10,5;UBERON:0004111,7.08e-10,122;UBERON:0011216,5.50e-07,194|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0,3.00699875694585,3.51015439662396,0.841299845405528,0.285650984403804,0.883474163806454,1.95985278743926,1.91690942036473,2.75765635983006,1.10115880999389,2.80912143787413,1.22885226604995,3.56092976871523,5.58074625974699,4.16730696445408,0.558365998002762,1.68828783009504,1.37518422999129,2.65165726926301,2.70506193518296,1.86399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.46612694769419,0,0,0,0,3.2953940669061,3.20250421973039,5.02617408451458,3.65031072403781,4.60287823194595,3.53239675751252,2.59586020908412,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,1.0803727788321,0.753524089178575,0.95251098811859,0.896796041993948,1.3118241438362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,5.04232600658494,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,2.57865710502847,0,0,0,0.390438744296638,0.646270193198397,0,0.891194696329576,1.13230612315533,0,0.876767573733936,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0.428674070063185,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,4.14292712856459,1.14579102687879,3.43706364687375,2.74033007908257,4.5323633843382,3.37511250115903,4.05289082901798,3.62513927187364,2.07104124700728,0.415149390336707,0.399024873401031,0.341467211508268,0.729320151204882,0.838452650511929,0.551530525350042,0.888986911206461,1.03017528619447,0.64183841918363,0.505394423527595,1.01391719956096,0.754505365544305,1.21733959710847,0.704276676453562,0.804096565378586,0.476293691283074,0.811190281613988,0.77163688185482,0.412085900803307,1.17759136107518,0.685738504770831,0.532427418478012,0.476872379894642,1.16277133305863,0.564656282491984,0.507687647350059,1.28049581010941,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.394017929502254,1.22769312950907,0.619747364743864,1.15743966588685,0.999242311751784,1.40358965067245,0.644613162144895,0.382576664137687,0.220591419119515,0|short_description=p17@Mtap2}} | ||
|EntrezGene=17756 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=P20357 | |||
|association_with_transcript=13bp_to_ENSMUST00000114013_5end | |||
|description=CAGE_peak_17_at_Mtap2_5end | |||
|id=chr1:66368306..66368313,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.32e-18!23;CL:0000337!2.32e-18!23;CL:0000540!3.66e-17!33;CL:0000047!3.66e-17!33;CL:0000031!3.66e-17!33;CL:0000404!3.66e-17!33;CL:0000393!6.75e-13!39;CL:0000211!6.75e-13!39;CL:0000221!1.94e-12!44;CL:0000133!1.94e-12!44;CL:0002319!3.25e-12!43;CL:0000055!4.34e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.86e-22,23;CL:0000337,1.86e-22,23;CL:0000540,1.30e-15,33;CL:0000047,1.30e-15,33;CL:0000031,1.30e-15,33;CL:0000404,1.30e-15,33;CL:0000393,2.19e-12,39;CL:0000211,2.19e-12,39;CL:0002319,9.54e-11,43;CL:0000221,2.19e-10,44;CL:0000133,2.19e-10,44;CL:0002609,4.37e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.49e-32!75;UBERON:0001016!3.49e-32!75;UBERON:0001017!1.23e-31!73;UBERON:0005743!1.23e-31!73;UBERON:0000033!2.87e-30!63;UBERON:0001049!1.12e-28!52;UBERON:0005068!1.12e-28!52;UBERON:0006241!1.12e-28!52;UBERON:0007135!1.12e-28!52;UBERON:0000955!6.33e-28!50;UBERON:0006238!6.33e-28!50;UBERON:0002346!6.83e-28!71;UBERON:0003075!6.83e-28!71;UBERON:0007284!6.83e-28!71;UBERON:0004121!4.59e-27!102;UBERON:0000924!4.59e-27!102;UBERON:0006601!4.59e-27!102;UBERON:0002616!4.59e-27!49;UBERON:0003056!1.66e-26!49;UBERON:0002020!1.55e-25!34;UBERON:0003080!1.93e-23!40;UBERON:0002780!1.63e-22!39;UBERON:0001890!1.63e-22!39;UBERON:0006240!1.63e-22!39;UBERON:0002791!3.12e-22!29;UBERON:0003528!3.12e-22!29;UBERON:0001893!3.12e-22!29;UBERON:0007811!5.48e-17!86;UBERON:0000956!2.21e-15!21;UBERON:0001869!2.21e-15!21;UBERON:0000203!2.21e-15!21;UBERON:0000153!5.33e-14!94;UBERON:0002619!3.61e-12!17;UBERON:0002021!2.25e-10!10;UBERON:0000411!2.25e-10!10;UBERON:0001950!2.25e-10!10;UBERON:0002420!5.06e-08!8;UBERON:0007245!5.06e-08!8;UBERON:0010009!5.06e-08!8;UBERON:0010011!5.06e-08!8;UBERON:0000454!5.06e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.52e-41,54;UBERON:0001017,5.62e-37,73;UBERON:0001049,3.39e-36,52;UBERON:0005068,3.39e-36,52;UBERON:0006241,3.39e-36,52;UBERON:0007135,3.39e-36,52;UBERON:0000955,3.95e-36,47;UBERON:0006238,3.95e-36,47;UBERON:0002020,9.97e-36,34;UBERON:0001016,1.09e-35,75;UBERON:0002616,1.02e-34,46;UBERON:0003528,4.49e-34,29;UBERON:0002791,4.49e-34,29;UBERON:0001893,4.49e-34,29;UBERON:0003080,1.71e-31,40;UBERON:0002346,5.58e-31,64;UBERON:0003075,5.58e-31,64;UBERON:0007284,5.58e-31,64;UBERON:0002780,5.74e-30,39;UBERON:0001890,5.74e-30,39;UBERON:0006240,5.74e-30,39;UBERON:0004121,1.17e-28,95;UBERON:0000924,1.17e-28,95;UBERON:0006601,1.17e-28,95;UBERON:0003056,9.15e-28,49;UBERON:0010371,6.80e-26,73;UBERON:0000956,2.72e-24,21;UBERON:0001869,2.72e-24,21;UBERON:0000203,2.72e-24,21;UBERON:0002619,5.42e-21,17;UBERON:0010314,1.92e-18,92;UBERON:0002021,5.82e-17,10;UBERON:0000411,5.82e-17,10;UBERON:0001950,5.82e-17,10;UBERON:0000025,3.20e-11,114;UBERON:0002420,1.22e-10,8;UBERON:0007245,1.22e-10,8;UBERON:0010009,1.22e-10,8;UBERON:0010011,1.22e-10,8;UBERON:0000454,1.22e-10,8;UBERON:0000369,5.47e-10,5;UBERON:0002435,5.47e-10,5;UBERON:0000204,5.47e-10,5;UBERON:0010082,5.47e-10,5;UBERON:0004111,7.08e-10,122;UBERON:0011216,5.50e-07,194 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0,3.00699875694585,3.51015439662396,0.841299845405528,0.285650984403804,0.883474163806454,1.95985278743926,1.91690942036473,2.75765635983006,1.10115880999389,2.80912143787413,1.22885226604995,3.56092976871523,5.58074625974699,4.16730696445408,0.558365998002762,1.68828783009504,1.37518422999129,2.65165726926301,2.70506193518296,1.86399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.46612694769419,0,0,0,0,3.2953940669061,3.20250421973039,5.02617408451458,3.65031072403781,4.60287823194595,3.53239675751252,2.59586020908412,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,1.0803727788321,0.753524089178575,0.95251098811859,0.896796041993948,1.3118241438362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,5.04232600658494,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,2.57865710502847,0,0,0,0.390438744296638,0.646270193198397,0,0.891194696329576,1.13230612315533,0,0.876767573733936,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0.428674070063185,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,4.14292712856459,1.14579102687879,3.43706364687375,2.74033007908257,4.5323633843382,3.37511250115903,4.05289082901798,3.62513927187364,2.07104124700728,0.415149390336707,0.399024873401031,0.341467211508268,0.729320151204882,0.838452650511929,0.551530525350042,0.888986911206461,1.03017528619447,0.64183841918363,0.505394423527595,1.01391719956096,0.754505365544305,1.21733959710847,0.704276676453562,0.804096565378586,0.476293691283074,0.811190281613988,0.77163688185482,0.412085900803307,1.17759136107518,0.685738504770831,0.532427418478012,0.476872379894642,1.16277133305863,0.564656282491984,0.507687647350059,1.28049581010941,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.394017929502254,1.22769312950907,0.619747364743864,1.15743966588685,0.999242311751784,1.40358965067245,0.644613162144895,0.382576664137687,0.220591419119515,0 | |||
|short_description=p17@Mtap2 | |||
}} |
Revision as of 20:44, 13 September 2013
Short description: | p17@Mtap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Mtap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 13bp_to_ENSMUST00000114013_5end |
EntrezGene: | Mtap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.86e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.86e-22 | 23 |
neuron | 1.30e-15 | 33 |
neuronal stem cell | 1.30e-15 | 33 |
neuroblast | 1.30e-15 | 33 |
electrically signaling cell | 1.30e-15 | 33 |
electrically responsive cell | 2.19e-12 | 39 |
electrically active cell | 2.19e-12 | 39 |
neural cell | 9.54e-11 | 43 |
ectodermal cell | 2.19e-10 | 44 |
neurectodermal cell | 2.19e-10 | 44 |
neuron of cerebral cortex | 4.37e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.