FFCP PHASE1:Mm9::chr17:34258889..34258917,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14312|HGNC=|MCL_coexpression_id=255|UniProt=|association_with_transcript=15bp_to_ENSMUST00000151986_5end|description=CAGE_peak_10_at_Brd2_5end|id=chr17:34258889..34258917,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.58e-14!94;UBERON:0007811!1.40e-13!86;UBERON:0000033!1.60e-08!63;UBERON:0000955!4.06e-08!50;UBERON:0006238!4.06e-08!50;UBERON:0001049!6.61e-08!52;UBERON:0005068!6.61e-08!52;UBERON:0006241!6.61e-08!52;UBERON:0007135!6.61e-08!52;UBERON:0002616!8.29e-08!49;UBERON:0003056!1.63e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.92e-08,64;UBERON:0003075,2.92e-08,64;UBERON:0007284,2.92e-08,64;UBERON:0000153,4.02e-08,43;UBERON:0003056,5.92e-08,49;UBERON:0000955,1.84e-07,47;UBERON:0006238,1.84e-07,47;UBERON:0002616,4.82e-07,46;UBERON:0002370,5.22e-07,23;UBERON:0000974,5.22e-07,23;UBERON:0004807,5.22e-07,23;UBERON:0005058,5.22e-07,23;UBERON:0003351,5.22e-07,23;UBERON:0009113,5.22e-07,23;UBERON:0003295,5.22e-07,23;UBERON:0009722,5.22e-07,23;UBERON:0005562,5.22e-07,23;UBERON:0007690,5.22e-07,23;UBERON:0007811,6.13e-07,36;UBERON:0000073,7.89e-07,54;UBERON:0001049,8.22e-07,52;UBERON:0005068,8.22e-07,52;UBERON:0006241,8.22e-07,52;UBERON:0007135,8.22e-07,52|phase1_expression=0.480446541314382,0.697950815278722,1.81999695755814,1.51232105653415,0.500895729946347,0.33575854382378,1.16806320297763,0.258246646883153,1.68946466582,0.936258105287974,2.05461561870606,2.6324812468461,1.36960583944965,0.34968160967599,0.999329285446988,1.61980213911861,0.699561878128147,1.26184866143295,0.411343300817216,0.42438965179803,0.0850432901510698,3.17731043842833,2.87319768052829,0.319984845586813,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0.380046838912748,0.252030129759931,1.10865255327652,2.54012269383853,7.99584223859941,15.8481681015439,0,0.498703936075477,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,0.251793635951155,0.202753862439029,0.550640256485045,1.56478268869608,0.65407546914134,0.439372365468944,0,0.55994568650145,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,0.933206510776299,1.35005938331691,2.52389953621658,0.571301968807607,1.54607978666129,0.734944795289724,1.15014565221884,0.919218786610021,1.10115880999389,0.893811366596314,0.921639199537461,2.37395317914349,2.19570344645783,2.08365348222704,0.837548997004143,1.12552522006336,1.22238598221448,0.883885756421003,0.427115042397309,1.4911955666024,0.227178579999552,0.226714680320357,0.289864488701678,0,1.3599426674155,1.07940638327563,0,0,0.280888840263504,1.1930122580464,0.259786004602869,1.41335829804136,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0,0.79928715803342,0.258937883647172,0.445326417194474,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.883366073841574,1.45462575940567,1.86391761218122,2.63502717310392,1.8850203613211,0,0.239630249011841,0,0.254140454146129,0.898743836428936,1.37250180845588,1.7591609295801,0.695297280769106,0.511430914660661,1.45451631191692,0.811206315338788,0.305518091550949,0.622034853050465,0.505445516867349,0.420883711772948,1.95180664444056,0.689706313300419,1.0803727788321,1.50704817835715,1.42876648217788,1.0249097622788,1.78033276663485,0.517406741478031,3.66465587985832,2.08016688184601,2.28736461413134,0.657587197282725,0.278047249225598,0.696504333044333,1.02891068203972,0.199034266818493,0,0.257347907114715,0,1.86413195281952,0.469052119962192,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.697601834251224,0.804820204198858,0.350296027101508,0.16455984991348,0.820837320395476,0.243206428637567,0.730999937126662,0.658650345873152,0.268412837520744,0.630869845692382,1.02904612379284,0,1.05780226665418,1.2797295032114,0.928946687441754,1.80414445850931,1.21010114774006,1.33426826306922,0.760902504450237,0.474529061544512,0.823494773620054,1.00534083520108,0.795825888164603,0.38992817423824,0,0.432276099749388,0.796565093017469,0.948339504765408,0.228497025219458,1.1270773567308,0.407302655690628,0.581857461502877,0.210407459670956,0.252946148497029,0.442830443938806,0.941992367048249,0.370191491765402,0.592905254174298,1.16791574001266,1.57247196090562,0.899448449539415,0.202860121388503,0.241177159752417,1.01850340712568,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,0.554259570499814,1.32643988239339,1.95557971730431,0.678980343100753,0.704070744865506,0.502518772325447,0.476087281772027,0.780534591431195,0.630540576424764,0,0.637819074629948,0,0.172684981865896,0.723245292907558,0,1.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| ||
|EntrezGene=14312 | |||
|HGNC= | |||
|MCL_coexpression_id=255 | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENSMUST00000151986_5end | |||
|description=CAGE_peak_10_at_Brd2_5end | |||
|id=chr17:34258889..34258917,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.58e-14!94;UBERON:0007811!1.40e-13!86;UBERON:0000033!1.60e-08!63;UBERON:0000955!4.06e-08!50;UBERON:0006238!4.06e-08!50;UBERON:0001049!6.61e-08!52;UBERON:0005068!6.61e-08!52;UBERON:0006241!6.61e-08!52;UBERON:0007135!6.61e-08!52;UBERON:0002616!8.29e-08!49;UBERON:0003056!1.63e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.92e-08,64;UBERON:0003075,2.92e-08,64;UBERON:0007284,2.92e-08,64;UBERON:0000153,4.02e-08,43;UBERON:0003056,5.92e-08,49;UBERON:0000955,1.84e-07,47;UBERON:0006238,1.84e-07,47;UBERON:0002616,4.82e-07,46;UBERON:0002370,5.22e-07,23;UBERON:0000974,5.22e-07,23;UBERON:0004807,5.22e-07,23;UBERON:0005058,5.22e-07,23;UBERON:0003351,5.22e-07,23;UBERON:0009113,5.22e-07,23;UBERON:0003295,5.22e-07,23;UBERON:0009722,5.22e-07,23;UBERON:0005562,5.22e-07,23;UBERON:0007690,5.22e-07,23;UBERON:0007811,6.13e-07,36;UBERON:0000073,7.89e-07,54;UBERON:0001049,8.22e-07,52;UBERON:0005068,8.22e-07,52;UBERON:0006241,8.22e-07,52;UBERON:0007135,8.22e-07,52 | |||
|phase1_expression=0.480446541314382,0.697950815278722,1.81999695755814,1.51232105653415,0.500895729946347,0.33575854382378,1.16806320297763,0.258246646883153,1.68946466582,0.936258105287974,2.05461561870606,2.6324812468461,1.36960583944965,0.34968160967599,0.999329285446988,1.61980213911861,0.699561878128147,1.26184866143295,0.411343300817216,0.42438965179803,0.0850432901510698,3.17731043842833,2.87319768052829,0.319984845586813,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0.380046838912748,0.252030129759931,1.10865255327652,2.54012269383853,7.99584223859941,15.8481681015439,0,0.498703936075477,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,0.251793635951155,0.202753862439029,0.550640256485045,1.56478268869608,0.65407546914134,0.439372365468944,0,0.55994568650145,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,0.933206510776299,1.35005938331691,2.52389953621658,0.571301968807607,1.54607978666129,0.734944795289724,1.15014565221884,0.919218786610021,1.10115880999389,0.893811366596314,0.921639199537461,2.37395317914349,2.19570344645783,2.08365348222704,0.837548997004143,1.12552522006336,1.22238598221448,0.883885756421003,0.427115042397309,1.4911955666024,0.227178579999552,0.226714680320357,0.289864488701678,0,1.3599426674155,1.07940638327563,0,0,0.280888840263504,1.1930122580464,0.259786004602869,1.41335829804136,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0,0.79928715803342,0.258937883647172,0.445326417194474,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.883366073841574,1.45462575940567,1.86391761218122,2.63502717310392,1.8850203613211,0,0.239630249011841,0,0.254140454146129,0.898743836428936,1.37250180845588,1.7591609295801,0.695297280769106,0.511430914660661,1.45451631191692,0.811206315338788,0.305518091550949,0.622034853050465,0.505445516867349,0.420883711772948,1.95180664444056,0.689706313300419,1.0803727788321,1.50704817835715,1.42876648217788,1.0249097622788,1.78033276663485,0.517406741478031,3.66465587985832,2.08016688184601,2.28736461413134,0.657587197282725,0.278047249225598,0.696504333044333,1.02891068203972,0.199034266818493,0,0.257347907114715,0,1.86413195281952,0.469052119962192,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.697601834251224,0.804820204198858,0.350296027101508,0.16455984991348,0.820837320395476,0.243206428637567,0.730999937126662,0.658650345873152,0.268412837520744,0.630869845692382,1.02904612379284,0,1.05780226665418,1.2797295032114,0.928946687441754,1.80414445850931,1.21010114774006,1.33426826306922,0.760902504450237,0.474529061544512,0.823494773620054,1.00534083520108,0.795825888164603,0.38992817423824,0,0.432276099749388,0.796565093017469,0.948339504765408,0.228497025219458,1.1270773567308,0.407302655690628,0.581857461502877,0.210407459670956,0.252946148497029,0.442830443938806,0.941992367048249,0.370191491765402,0.592905254174298,1.16791574001266,1.57247196090562,0.899448449539415,0.202860121388503,0.241177159752417,1.01850340712568,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,0.554259570499814,1.32643988239339,1.95557971730431,0.678980343100753,0.704070744865506,0.502518772325447,0.476087281772027,0.780534591431195,0.630540576424764,0,0.637819074629948,0,0.172684981865896,0.723245292907558,0,1.08781136763742,0,0.551873492609465,0.642202359951168,0.937693492737625,0.163934945376675,0.252470927204373,0.94652465824877,1.17131623288992,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0.584511715822624,0.395287777946524,1.28528526568723,1.13552068166615,0.178065603667255,0,0.659880491890142,0,1.21390318077491,1.209294227859,0,1.18120757152309,0.614870295887855,0.258428293168221,0.727067458955011,0,0,0,0,1.70219802876894,2.16073312837572,2.71653235943784,3.21505552547388,1.77340233642274,2.14042581122485,1.15184314421485,0.913394847343798,0.23467170806371,0.21183207086382,0.882113592219848,0.65954501176592,0.484393280087717,0.784068024066026,0.238744688006273,0.656563598980245,0.874442509889552,0.927126510052548,1.02522528478712,0.82554747185289,0.370389054739423,0.753473828018764,0.546776910884101,0.915112692826091,0.339956859987711,0.279902904647316,0.414599921413271,0.954670618015114,2.68885594543965,1.21991680276109,0.432021363287205,0.836353184057875,0.218362563746178,0.269728692769641,0.247960367176008,0.785267825952089,0.388844919875379,0.621339313086926,0,0.299033092087958,0.496375471371293,0.583353565032143,0.258319646955462,0.337912250981556,0.821500670520278,0.911430693907651,0.209718688851422,0,0,1.26404448251271,0.810900861160657,1.23253148597793,1.55904987573354,2.68540043501222,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| |||
|short_description=p10@Brd2 | |||
}} |
Revision as of 14:11, 13 September 2013
Short description: | p10@Brd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Brd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:255 |
Association with transcript: | 15bp_to_ENSMUST00000151986_5end |
EntrezGene: | Brd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.92e-08 | 64 |
neural plate | 2.92e-08 | 64 |
presumptive neural plate | 2.92e-08 | 64 |
anterior region of body | 4.02e-08 | 43 |
pre-chordal neural plate | 5.92e-08 | 49 |
brain | 1.84e-07 | 47 |
future brain | 1.84e-07 | 47 |
regional part of brain | 4.82e-07 | 46 |
thymus | 5.22e-07 | 23 |
neck | 5.22e-07 | 23 |
respiratory system epithelium | 5.22e-07 | 23 |
hemolymphoid system gland | 5.22e-07 | 23 |
pharyngeal epithelium | 5.22e-07 | 23 |
thymic region | 5.22e-07 | 23 |
pharyngeal gland | 5.22e-07 | 23 |
entire pharyngeal arch endoderm | 5.22e-07 | 23 |
thymus primordium | 5.22e-07 | 23 |
early pharyngeal endoderm | 5.22e-07 | 23 |
craniocervical region | 6.13e-07 | 36 |
regional part of nervous system | 7.89e-07 | 54 |
neural tube | 8.22e-07 | 52 |
neural rod | 8.22e-07 | 52 |
future spinal cord | 8.22e-07 | 52 |
neural keel | 8.22e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.