FFCP PHASE1:Mm9::chr4:116323994..116324014,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=58810|HGNC=|MCL_coexpression_id=355|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128010_5end|description=CAGE_peak_3_at_Akr1a1_5end|id=chr4:116323994..116324014,-|ontology_enrichment_celltype=CL:0000066!2.23e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,1.89e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.83e-12!43;UBERON:0005256!1.92e-11!47;UBERON:0005409!2.95e-11!59;UBERON:0005172!9.18e-11!49;UBERON:0005173!9.18e-11!49;UBERON:0002417!9.18e-11!49;UBERON:0000916!9.18e-11!49;UBERON:0009854!4.83e-09!23;UBERON:0009856!4.83e-09!23;UBERON:0004119!5.09e-09!130;UBERON:0000925!5.09e-09!130;UBERON:0006595!5.09e-09!130;UBERON:0009569!7.55e-09!66;UBERON:0000344!8.47e-09!15;UBERON:0002107!1.31e-08!22;UBERON:0007499!1.31e-08!22;UBERON:0006925!1.31e-08!22;UBERON:0009497!1.31e-08!22;UBERON:0000015!1.31e-08!22;UBERON:0002423!1.31e-08!22;UBERON:0006235!1.31e-08!22;UBERON:0008835!1.31e-08!22;UBERON:0003894!1.31e-08!22;UBERON:0004161!1.31e-08!22;UBERON:0008836!1.31e-08!22;UBERON:0001007!1.37e-08!128;UBERON:0001555!1.37e-08!128;UBERON:0007026!1.37e-08!128;UBERON:0002100!1.94e-08!98;UBERON:0002365!5.96e-08!25;UBERON:0002330!5.96e-08!25;UBERON:0004921!6.88e-08!126;UBERON:0004185!6.88e-08!126;UBERON:0001242!8.36e-08!13;UBERON:0000060!8.36e-08!13;UBERON:0001262!8.36e-08!13;UBERON:0004786!8.36e-08!13;UBERON:0005177!2.92e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.41e-13,31;UBERON:0003104,2.94e-12,61;UBERON:0009142,2.94e-12,61;UBERON:0005256,2.31e-11,45;UBERON:0002100,8.95e-11,90;UBERON:0005172,9.15e-11,49;UBERON:0005173,9.15e-11,49;UBERON:0002417,9.15e-11,49;UBERON:0000916,9.15e-11,49;UBERON:0005409,9.39e-11,47;UBERON:0005177,9.33e-10,79;UBERON:0009854,4.82e-09,23;UBERON:0009856,4.82e-09,23;UBERON:0009569,7.53e-09,66;UBERON:0000344,8.45e-09,15;UBERON:0002107,1.31e-08,22;UBERON:0007499,1.31e-08,22;UBERON:0006925,1.31e-08,22;UBERON:0009497,1.31e-08,22;UBERON:0000015,1.31e-08,22;UBERON:0002423,1.31e-08,22;UBERON:0006235,1.31e-08,22;UBERON:0008835,1.31e-08,22;UBERON:0003894,1.31e-08,22;UBERON:0004161,1.31e-08,22;UBERON:0008836,1.31e-08,22;UBERON:0004119,5.43e-08,118;UBERON:0000925,5.43e-08,118;UBERON:0006595,5.43e-08,118;UBERON:0002365,5.94e-08,25;UBERON:0002330,5.94e-08,25;UBERON:0001242,8.35e-08,13;UBERON:0001262,8.35e-08,13;UBERON:0004786,8.35e-08,13;UBERON:0001007,1.38e-07,116;UBERON:0001555,1.38e-07,116;UBERON:0007026,1.38e-07,116;UBERON:0004921,6.32e-07,114|phase1_expression=7.36684696682052,172.393851373844,157.429736828779,102.837831844322,119.714079457177,49.3565059420956,43.6855637913633,1.16210991097419,3.09735188733667,2.57470978954193,1.19852577757853,1.35612670292072,0.513602189793617,0.174840804837995,2.6648780945253,5.06188168474565,4.89693314689703,0.788655413395594,0.822686601634433,0.84877930359606,109.365671134276,4.56738375524072,2.87319768052829,101.43519605102,112.63995700398,254.958992067069,179.627752398334,127.774440982732,311.068337650084,305.712547398796,121.951780860418,5.08024538767705,4.30545351309199,0,41.5946332441835,41.5586613396231,36.9546534834888,2.92972141515835,7.0320181007142,3.14114246384279,3.52938892818609,5.46436387966757,4.36959317728038,13.09326906946,13.0776241273174,13.7660064121261,10.1710874765245,4.36050312760893,9.22681967484782,8.74934545834275,5.17949760013841,0,0.671130424230945,0.725362142011344,1.34437519656986,32.4146889405293,21.203474555468,25.7836046138721,0.404632921719196,1.5869729378161,0.633831403506179,15.5868484751801,8.89294796111139,88.1901722935771,136.463558034242,94.4938552878313,18.5752068521411,10.7581125490035,0.933206510776299,1.62007125998029,1.26194976810829,2.85650984403804,3.09215957332259,0.979926393719632,0.958454710182364,1.83843757322004,5.50579404996943,1.14918604276669,1.53606533256243,0.527545150920775,1.46380229763855,1.04182674111352,2.23346399201105,3.37657566019008,2.29197371665215,1.17851434189467,1.99320353118744,1.67759501242771,22.642131806622,11.3357340160178,10.4351215932604,197.897491705719,146.193836747166,288.201504334594,166.342762866603,146.056765193731,141.287086652542,17.2134625803838,15.846946280775,18.3736578745377,16.3378366940949,8.98285341900225,0,0,23.3810324292111,20.7755089689581,23.7596489156948,179.7254266778,4.14300613835475,32.211944177067,12.8379141806941,27.0974275697806,32.7474006103603,41.5994487925238,23.7529188414124,30.2856485104518,52.6525281274216,8.6759614151947,3.5384422077995,4.36770494858005,1.76673214768315,3.39412677194655,82.0123749359738,0.585561594023094,0.628340120440365,127.217613493879,2.27648736561249,1.79970819298022,1.39777249780371,1.79748767285787,2.28750301409313,0.251308704225729,1.21677024134594,1.02286182932132,3.1168206683934,2.10913641988085,5.49932564791708,25.7522429162893,122.823260598766,7.78634866779954,2.34216797332867,5.0578462975364,3.06105620669094,4.9732589885786,1.83698547708585,3.20284300712124,2.90475346135159,5.69147415625834,2.58681591519411,3.78212160335639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| ||
|EntrezGene=58810 | |||
|HGNC= | |||
|MCL_coexpression_id=355 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000128010_5end | |||
|description=CAGE_peak_3_at_Akr1a1_5end | |||
|id=chr4:116323994..116324014,- | |||
|ontology_enrichment_celltype=CL:0000066!2.23e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.89e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.83e-12!43;UBERON:0005256!1.92e-11!47;UBERON:0005409!2.95e-11!59;UBERON:0005172!9.18e-11!49;UBERON:0005173!9.18e-11!49;UBERON:0002417!9.18e-11!49;UBERON:0000916!9.18e-11!49;UBERON:0009854!4.83e-09!23;UBERON:0009856!4.83e-09!23;UBERON:0004119!5.09e-09!130;UBERON:0000925!5.09e-09!130;UBERON:0006595!5.09e-09!130;UBERON:0009569!7.55e-09!66;UBERON:0000344!8.47e-09!15;UBERON:0002107!1.31e-08!22;UBERON:0007499!1.31e-08!22;UBERON:0006925!1.31e-08!22;UBERON:0009497!1.31e-08!22;UBERON:0000015!1.31e-08!22;UBERON:0002423!1.31e-08!22;UBERON:0006235!1.31e-08!22;UBERON:0008835!1.31e-08!22;UBERON:0003894!1.31e-08!22;UBERON:0004161!1.31e-08!22;UBERON:0008836!1.31e-08!22;UBERON:0001007!1.37e-08!128;UBERON:0001555!1.37e-08!128;UBERON:0007026!1.37e-08!128;UBERON:0002100!1.94e-08!98;UBERON:0002365!5.96e-08!25;UBERON:0002330!5.96e-08!25;UBERON:0004921!6.88e-08!126;UBERON:0004185!6.88e-08!126;UBERON:0001242!8.36e-08!13;UBERON:0000060!8.36e-08!13;UBERON:0001262!8.36e-08!13;UBERON:0004786!8.36e-08!13;UBERON:0005177!2.92e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.41e-13,31;UBERON:0003104,2.94e-12,61;UBERON:0009142,2.94e-12,61;UBERON:0005256,2.31e-11,45;UBERON:0002100,8.95e-11,90;UBERON:0005172,9.15e-11,49;UBERON:0005173,9.15e-11,49;UBERON:0002417,9.15e-11,49;UBERON:0000916,9.15e-11,49;UBERON:0005409,9.39e-11,47;UBERON:0005177,9.33e-10,79;UBERON:0009854,4.82e-09,23;UBERON:0009856,4.82e-09,23;UBERON:0009569,7.53e-09,66;UBERON:0000344,8.45e-09,15;UBERON:0002107,1.31e-08,22;UBERON:0007499,1.31e-08,22;UBERON:0006925,1.31e-08,22;UBERON:0009497,1.31e-08,22;UBERON:0000015,1.31e-08,22;UBERON:0002423,1.31e-08,22;UBERON:0006235,1.31e-08,22;UBERON:0008835,1.31e-08,22;UBERON:0003894,1.31e-08,22;UBERON:0004161,1.31e-08,22;UBERON:0008836,1.31e-08,22;UBERON:0004119,5.43e-08,118;UBERON:0000925,5.43e-08,118;UBERON:0006595,5.43e-08,118;UBERON:0002365,5.94e-08,25;UBERON:0002330,5.94e-08,25;UBERON:0001242,8.35e-08,13;UBERON:0001262,8.35e-08,13;UBERON:0004786,8.35e-08,13;UBERON:0001007,1.38e-07,116;UBERON:0001555,1.38e-07,116;UBERON:0007026,1.38e-07,116;UBERON:0004921,6.32e-07,114 | |||
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| |||
|short_description=p3@Akr1a1 | |||
}} | |||
Revision as of 03:31, 14 September 2013
| Short description: | p3@Akr1a1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Akr1a1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:355 |
| Association with transcript: | 0bp_to_ENSMUST00000128010_5end |
| EntrezGene: | Akr1a1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.89e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
