FFCP PHASE1:Mm9::chr17:53618852..53618863,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=271457|HGNC=|MCL_coexpression_id=75|UniProt=Q9CQD1,Q4VAA1|association_with_transcript=293bp_to_ENSMUST00000017975,NM_025887,uc008czn.1_5end|description=CAGE_peak_7_at_Rab5a_5end|id=chr17:53618852..53618863,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.23e-16,5;UBERON:0001003,1.23e-16,5;UBERON:0002097,1.23e-16,5;UBERON:0002199,1.23e-16,5;UBERON:0007029,1.23e-16,5;UBERON:0007376,1.23e-16,5;UBERON:0002416,1.23e-16,5;UBERON:0007383,1.23e-16,5;UBERON:0003102,4.70e-11,22;UBERON:0000945,2.88e-07,16;UBERON:0010039,2.88e-07,16|phase1_expression=0,0.348975407639361,0.909998478779072,1.51232105653415,0.500895729946347,0.839396359559449,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0.95995453676044,0.68822784320151,0.57423196411502,0,1.29282739611533,0.950117097281869,0,0.886922042621219,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0,0,0,0,1.45072428402269,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.226714680320357,0,0,1.3599426674155,1.07940638327563,0,1.34408066129201,0.421333260395256,0.340860645156116,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0.587943535678524,0,0.494389935468748,0.433798070759735,0,0.323533699894818,0,0.484875253135222,0,0,0.628340120440365,1.27728527604296,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0.511430914660661,0.83115217823824,0,0,0,0,0.631325567659422,0.260240885925407,0.229902104433473,0,0.60281927134286,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0,0,1.74126083261083,2.67516777330327,0.199034266818493,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.268412837520744,0.210289948564127,0,1.98251269790279,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0.658795818896044,0.754005626400808,0.198956472041151,0.38992817423824,1.79763881730844,0.864552199498777,0.597423819763102,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0,0.616985819609003,0.592905254174298,0,0,0.449724224769707,0,0,0,0,0.324270453550071,0.549122826376163,0,0,0.312037673114561,0,0.538192240565737,0.964887042726734,0.554259570499814,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.983179888294428,0,0.144649058581512,0,0.54390568381871,0.983528546038072,0.275936746304732,0.321101179975584,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.584511715822624,0,0.321321316421807,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0.42366414172764,0.661585194164886,1.6488625294148,8.88054346827481,1.62844897306021,2.626191568069,3.61109979439135,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.276399947608848,3.81868247206045,0,0,0.216010681643603,2.09088296014469,3.27543845619266,6.20375993370175,4.3806331534428,4.18809507174447,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.116876902181569,15.4176660858344,0.221985953374065,0.358855426437903,0,0,0.187682475451182,0,10.7184189539533,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,2.02506750069542,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0.243106717068294,0,0.919217542250071,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.441596760403192,0,0,0,0.145346416632329,0,0.25384382367503,0,0.526139422875686,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0,0.771626443924566,0,1.40358965067245,1.07435527024149,0.956441660344217,0.882365676478062,0.231867835620421|short_description=p7@Rab5a}} | ||
|EntrezGene=271457 | |||
|HGNC= | |||
|MCL_coexpression_id=75 | |||
|UniProt=Q9CQD1,Q4VAA1 | |||
|association_with_transcript=293bp_to_ENSMUST00000017975,NM_025887,uc008czn.1_5end | |||
|description=CAGE_peak_7_at_Rab5a_5end | |||
|id=chr17:53618852..53618863,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.23e-16,5;UBERON:0001003,1.23e-16,5;UBERON:0002097,1.23e-16,5;UBERON:0002199,1.23e-16,5;UBERON:0007029,1.23e-16,5;UBERON:0007376,1.23e-16,5;UBERON:0002416,1.23e-16,5;UBERON:0007383,1.23e-16,5;UBERON:0003102,4.70e-11,22;UBERON:0000945,2.88e-07,16;UBERON:0010039,2.88e-07,16 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,1.51232105653415,0.500895729946347,0.839396359559449,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0.95995453676044,0.68822784320151,0.57423196411502,0,1.29282739611533,0.950117097281869,0,0.886922042621219,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0,0,0,0,1.45072428402269,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.226714680320357,0,0,1.3599426674155,1.07940638327563,0,1.34408066129201,0.421333260395256,0.340860645156116,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0.587943535678524,0,0.494389935468748,0.433798070759735,0,0.323533699894818,0,0.484875253135222,0,0,0.628340120440365,1.27728527604296,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.173824320192276,0.511430914660661,0.83115217823824,0,0,0,0,0.631325567659422,0.260240885925407,0.229902104433473,0,0.60281927134286,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0,0,1.74126083261083,2.67516777330327,0.199034266818493,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.268412837520744,0.210289948564127,0,1.98251269790279,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0.658795818896044,0.754005626400808,0.198956472041151,0.38992817423824,1.79763881730844,0.864552199498777,0.597423819763102,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0,0.616985819609003,0.592905254174298,0,0,0.449724224769707,0,0,0,0,0.324270453550071,0.549122826376163,0,0,0.312037673114561,0,0.538192240565737,0.964887042726734,0.554259570499814,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.983179888294428,0,0.144649058581512,0,0.54390568381871,0.983528546038072,0.275936746304732,0.321101179975584,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.584511715822624,0,0.321321316421807,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0.42366414172764,0.661585194164886,1.6488625294148,8.88054346827481,1.62844897306021,2.626191568069,3.61109979439135,0,0.18542530201051,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.276399947608848,3.81868247206045,0,0,0.216010681643603,2.09088296014469,3.27543845619266,6.20375993370175,4.3806331534428,4.18809507174447,0.518459893167171,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.116876902181569,15.4176660858344,0.221985953374065,0.358855426437903,0,0,0.187682475451182,0,10.7184189539533,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,2.02506750069542,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0.243106717068294,0,0.919217542250071,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.441596760403192,0,0,0,0.145346416632329,0,0.25384382367503,0,0.526139422875686,0.407412341537585,0,0.118635018124174,0.0985044823755635,0,0,0.771626443924566,0,1.40358965067245,1.07435527024149,0.956441660344217,0.882365676478062,0.231867835620421 | |||
|short_description=p7@Rab5a | |||
}} |
Revision as of 14:55, 13 September 2013
Short description: | p7@Rab5a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rab5a_5end |
Coexpression cluster: | MCL_coexpression_mm9:75 |
Association with transcript: | 293bp_to_ENSMUST00000017975, NM_025887, uc008czn.1_5end |
EntrezGene: | Rab5a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.23e-16 | 5 |
skin epidermis | 1.23e-16 | 5 |
skin of body | 1.23e-16 | 5 |
integument | 1.23e-16 | 5 |
surface | 1.23e-16 | 5 |
outer epithelium | 1.23e-16 | 5 |
integumental system | 1.23e-16 | 5 |
enveloping layer of ectoderm | 1.23e-16 | 5 |
surface structure | 4.70e-11 | 22 |
stomach | 2.88e-07 | 16 |
food storage organ | 2.88e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.