Personal tools

FFCP PHASE1:Mm9::chr7:139802303..139802345,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=76429|HGNC=|UniProt=Q9D7I5|association_with_transcript=0bp_to_ENSMUST00000033241,ENSMUST00000148669,NM_029609,uc009kce.1_5end|description=CAGE_peak_1_at_Lhpp_5end|id=chr7:139802303..139802345,+|ontology_enrichment_celltype=CL:0000117!1.19e-08!23;CL:0000337!1.19e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.18e-08,23;CL:0000337,1.18e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!6.43e-11!34;UBERON:0002791!6.00e-08!29;UBERON:0003528!6.00e-08!29;UBERON:0001893!6.00e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.37e-11,34;UBERON:0003528,5.96e-08,29;UBERON:0002791,5.96e-08,29;UBERON:0001893,5.96e-08,29;UBERON:0010314,7.36e-08,92;UBERON:0000160,7.33e-07,31|phase1_expression=4.32401887182944,4.18770489167233,5.0049916332849,4.53696316960245,4.00716583957078,7.38668796412315,5.84031601488814,1.16210991097419,0.281577444303333,0.234064526321993,0.68487187290202,0.558405112967355,1.19840510951844,1.04904482902797,4.99664642723494,4.45445588257617,2.09868563438444,0.946386496074713,0.959801035240171,1.27316895539409,2.29616883407888,1.29078236561151,1.04479915655574,5.59973479776923,6.42345986988076,6.31655160526522,10.7690499039769,5.38678081714723,5.32065574477847,7.05684363327806,9.75614246883341,3.17515336729816,1.84519436275371,0,12.9983228888074,13.7974755647549,12.2501613757421,1.25559489221072,0.7813353445238,2.09409497589519,0,0,2.42755176515577,2.01434908760924,3.04130793658544,2.9367480345869,4.69434806608824,3.2703773457067,3.29529274101708,3.4997381833371,4.05960622713551,1.43752564364972,0.838913030288682,1.45072428402269,1.00828139742739,2.05807548828758,4.87106847895886,1.03134418455488,12.1389876515759,19.0436752537932,12.6766280701236,3.38844532069132,7.11435836888911,14.3983954765024,10.8775299882367,12.7886420690298,8.08920298399693,9.98967593836042,5.08079100311541,4.18518408828241,6.09942387919008,13.9968982357864,14.3564551618549,6.98197555525238,5.65488279007595,8.27296907949019,2.20231761998777,6.38436690425939,4.45458946443106,7.38563211289086,11.3444678066988,6.25096044668112,6.70039197603314,5.6276261003168,3.97275444219706,12.6690291753677,13.3829379951157,17.8943467992289,0.984440513331393,5.29000920747499,1.73918693221007,5.16254326188832,1.3599426674155,4.31762553310254,1.29955283489534,2.24013443548668,4.0728881838208,0.340860645156116,0,0.70667914902068,6.4787973097273,0,2.54805239706646,0,1.94841936910093,1.52015919285059,2.02209778005913,4.5673551887624,3.6251303710604,10.5393918736026,5.20455980298408,6.08930956624282,6.6878494204257,6.48107354376277,5.99702406392095,8.92232798440696,5.6854842578906,7.08536848907567,7.07688441559899,3.39710384889559,3.5334642953663,0.969750506270444,3.72783522436244,0.585561594023094,2.09446706813455,6.13096932500619,5.87094110079009,6.59893004092748,5.08280908292259,3.59497534571574,5.49000723382352,13.6963243803022,6.77914848749878,6.39288643325826,5.194701113989,4.70499662896497,4.17541391786297,3.11017426525233,1.26361379216837,7.78634866779954,2.21204753036596,3.67843367093557,1.80062129805349,3.16480117455002,2.17716797284249,2.3060469651273,4.12287588062807,6.46758426847539,4.31135985865684,3.59301552318857,3.16712023495108,5.69908904311695,4.17070873838397,1.39300866608867,3.49829631893504,4.77682240364384,7.72434506044558,4.63226232806487,6.81992398549422,4.14251545071004,5.39409937956521,6.84235833551856,7.10234206755631,8.46086196513836,5.707883176833,6.74348439776183,8.85302224618743,5.83826711835847,6.25327429671226,4.92502392237286,3.89130285820108,2.92399974850665,4.39100230582101,2.41571553768669,8.20130799400096,12.9659811597898,1.32167513193519,3.43785736662608,3.41261200856374,4.18026009348789,4.76809606891745,4.84040459096022,9.11749979763968,8.3699275489526,6.16887780007865,7.41145296258049,7.79139147280835,6.76452004939913,6.43381487493096,4.49409704327111,6.70027954611552,5.57595565112228,6.06937283049861,3.54170389090159,3.38123207019241,3.25842124552503,3.29719228184964,2.73529697572242,2.40298841072178,0.738050739898011,0.941992367048249,1.48076596706161,5.63259991465583,4.50481785433454,4.12773889737726,2.24862112384854,3.04290182082754,2.894125917029,1.78238096246994,3.45235364940973,2.7562988551756,3.56929837144506,1.43768206527355,4.09355042435354,2.18426371180192,4.04126204715379,6.27890947326693,4.82443521363367,2.40179147216586,4.73728529426212,5.21487924614483,3.73439188705414,1.64283173801951,2.68010011906905,2.61848004974615,0.780534591431195,2.20689201748667,4.4292937929755,3.50800491046472,3.60499292374624,2.24490476425664,1.88043776155965,6.03165135757089,5.4390568381871,8.35999264132362,4.96686143348518,2.72936002979246,3.5163505977661,0.983609672260053,4.79694761688309,2.2085575359138,1.95219372148319,2.15423397732799,3.82350076724083,4.23317480756549,3.67999490025482,2.42886421004937,0.876767573733936,3.55759000151871,4.17717711348349,5.81954349353901,6.7664929393557,5.37526965866801,5.44401405809367,1.32745138339963,2.18502572539483,3.62788268357701,1.69744571780308,3.2483208216885,1.84461088766356,3.35956781118687,2.54473610634254,2.49548164869305,0.948110273807448,1.05418608574999,2.06271086496374,5.10659408630682,1.62054984628179,2.71653235943784,4.71541477069503,3.19212420556092,3.38900753443934,3.45552943264454,2.13125464380219,2.58138878870081,0.63549621259146,3.96951116498931,3.95727007059552,1.45317984026315,2.95533332147964,3.22305328808468,4.59594519286172,5.53813589596716,3.33765543618917,2.39219233116994,1.857481811669,2.22233432843654,3.76736914009382,2.05041341581538,4.11800711771741,6.62915876976036,4.3384950220334,4.42239916174156,0.954670618015114,4.74503990371703,3.25311147402958,2.91614420218863,3.76358932826044,2.83871332870031,3.50647300600534,5.04186079924549,4.4498510137285,4.79575401179634,3.72803587852155,1.12738587736838,3.28936401296753,4.63283773279873,6.02798683866548,7.36210993823067,3.71703476079712,4.10750335260139,5.59878854828985,6.71099804324549,3.8653459332161,1.44015003128933,1.58005560314089,3.64905387522296,2.56777392912068,2.33857481360031,1.61124026100733,0.596044064343795,1.20195449519969,0.886137163047463,1.21159739937777,0.914481679859998,1.10908803650525,1.36441033035653,1.25075394132428,1.16876902181569,2.0405734525369,1.55390167361845,1.07656627931371,1.51096154727671,3.47741269257943,2.064507229963,4.02933573387983,4.07299920250225,2.50786052017682,6.7770221114048,5.9842280745933,6.30185064783336,7.90524638780963,5.48066015816514,4.5323633843382,6.75022500231806,5.40385443869065,6.79713613476307,3.10656187051092,3.52876981786201,6.3843979744165,5.29274177837816,3.8897074730927,4.82110274044359,4.77993121970037,3.77819437262746,3.09052585858341,5.13470735346904,3.03236654116557,2.78827229879264,4.33840585187975,4.21386783614471,4.54578582074572,5.05432126809397,4.76293691283074,4.86714168968393,4.82273051159263,4.12085900803307,4.12156976376312,1.02860775715625,2.30718548007139,2.62279808942053,3.0522747492789,3.85848459702856,4.65380343404221,4.75612729469209,3.6829759601298,2.44447404922551,2.80571135828869,4.1522256343461,4.53120618927592,5.32000356120596,3.56354734727722,2.50778594275484,7.49431733813838,4.44470056046276,4.29742108096597,2.29545998482612,4.85301122062934,3.94175320554716|short_description=p1@Lhpp}}
|EntrezGene=76429
|HGNC=
|UniProt=Q9D7I5
|association_with_transcript=0bp_to_ENSMUST00000033241,ENSMUST00000148669,NM_029609,uc009kce.1_5end
|description=CAGE_peak_1_at_Lhpp_5end
|id=chr7:139802303..139802345,+
|ontology_enrichment_celltype=CL:0000117!1.19e-08!23;CL:0000337!1.19e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.18e-08,23;CL:0000337,1.18e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!6.43e-11!34;UBERON:0002791!6.00e-08!29;UBERON:0003528!6.00e-08!29;UBERON:0001893!6.00e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.37e-11,34;UBERON:0003528,5.96e-08,29;UBERON:0002791,5.96e-08,29;UBERON:0001893,5.96e-08,29;UBERON:0010314,7.36e-08,92;UBERON:0000160,7.33e-07,31
|phase1_expression=4.32401887182944,4.18770489167233,5.0049916332849,4.53696316960245,4.00716583957078,7.38668796412315,5.84031601488814,1.16210991097419,0.281577444303333,0.234064526321993,0.68487187290202,0.558405112967355,1.19840510951844,1.04904482902797,4.99664642723494,4.45445588257617,2.09868563438444,0.946386496074713,0.959801035240171,1.27316895539409,2.29616883407888,1.29078236561151,1.04479915655574,5.59973479776923,6.42345986988076,6.31655160526522,10.7690499039769,5.38678081714723,5.32065574477847,7.05684363327806,9.75614246883341,3.17515336729816,1.84519436275371,0,12.9983228888074,13.7974755647549,12.2501613757421,1.25559489221072,0.7813353445238,2.09409497589519,0,0,2.42755176515577,2.01434908760924,3.04130793658544,2.9367480345869,4.69434806608824,3.2703773457067,3.29529274101708,3.4997381833371,4.05960622713551,1.43752564364972,0.838913030288682,1.45072428402269,1.00828139742739,2.05807548828758,4.87106847895886,1.03134418455488,12.1389876515759,19.0436752537932,12.6766280701236,3.38844532069132,7.11435836888911,14.3983954765024,10.8775299882367,12.7886420690298,8.08920298399693,9.98967593836042,5.08079100311541,4.18518408828241,6.09942387919008,13.9968982357864,14.3564551618549,6.98197555525238,5.65488279007595,8.27296907949019,2.20231761998777,6.38436690425939,4.45458946443106,7.38563211289086,11.3444678066988,6.25096044668112,6.70039197603314,5.6276261003168,3.97275444219706,12.6690291753677,13.3829379951157,17.8943467992289,0.984440513331393,5.29000920747499,1.73918693221007,5.16254326188832,1.3599426674155,4.31762553310254,1.29955283489534,2.24013443548668,4.0728881838208,0.340860645156116,0,0.70667914902068,6.4787973097273,0,2.54805239706646,0,1.94841936910093,1.52015919285059,2.02209778005913,4.5673551887624,3.6251303710604,10.5393918736026,5.20455980298408,6.08930956624282,6.6878494204257,6.48107354376277,5.99702406392095,8.92232798440696,5.6854842578906,7.08536848907567,7.07688441559899,3.39710384889559,3.5334642953663,0.969750506270444,3.72783522436244,0.585561594023094,2.09446706813455,6.13096932500619,5.87094110079009,6.59893004092748,5.08280908292259,3.59497534571574,5.49000723382352,13.6963243803022,6.77914848749878,6.39288643325826,5.194701113989,4.70499662896497,4.17541391786297,3.11017426525233,1.26361379216837,7.78634866779954,2.21204753036596,3.67843367093557,1.80062129805349,3.16480117455002,2.17716797284249,2.3060469651273,4.12287588062807,6.46758426847539,4.31135985865684,3.59301552318857,3.16712023495108,5.69908904311695,4.17070873838397,1.39300866608867,3.49829631893504,4.77682240364384,7.72434506044558,4.63226232806487,6.81992398549422,4.14251545071004,5.39409937956521,6.84235833551856,7.10234206755631,8.46086196513836,5.707883176833,6.74348439776183,8.85302224618743,5.83826711835847,6.25327429671226,4.92502392237286,3.89130285820108,2.92399974850665,4.39100230582101,2.41571553768669,8.20130799400096,12.9659811597898,1.32167513193519,3.43785736662608,3.41261200856374,4.18026009348789,4.76809606891745,4.84040459096022,9.11749979763968,8.3699275489526,6.16887780007865,7.41145296258049,7.79139147280835,6.76452004939913,6.43381487493096,4.49409704327111,6.70027954611552,5.57595565112228,6.06937283049861,3.54170389090159,3.38123207019241,3.25842124552503,3.29719228184964,2.73529697572242,2.40298841072178,0.738050739898011,0.941992367048249,1.48076596706161,5.63259991465583,4.50481785433454,4.12773889737726,2.24862112384854,3.04290182082754,2.894125917029,1.78238096246994,3.45235364940973,2.7562988551756,3.56929837144506,1.43768206527355,4.09355042435354,2.18426371180192,4.04126204715379,6.27890947326693,4.82443521363367,2.40179147216586,4.73728529426212,5.21487924614483,3.73439188705414,1.64283173801951,2.68010011906905,2.61848004974615,0.780534591431195,2.20689201748667,4.4292937929755,3.50800491046472,3.60499292374624,2.24490476425664,1.88043776155965,6.03165135757089,5.4390568381871,8.35999264132362,4.96686143348518,2.72936002979246,3.5163505977661,0.983609672260053,4.79694761688309,2.2085575359138,1.95219372148319,2.15423397732799,3.82350076724083,4.23317480756549,3.67999490025482,2.42886421004937,0.876767573733936,3.55759000151871,4.17717711348349,5.81954349353901,6.7664929393557,5.37526965866801,5.44401405809367,1.32745138339963,2.18502572539483,3.62788268357701,1.69744571780308,3.2483208216885,1.84461088766356,3.35956781118687,2.54473610634254,2.49548164869305,0.948110273807448,1.05418608574999,2.06271086496374,5.10659408630682,1.62054984628179,2.71653235943784,4.71541477069503,3.19212420556092,3.38900753443934,3.45552943264454,2.13125464380219,2.58138878870081,0.63549621259146,3.96951116498931,3.95727007059552,1.45317984026315,2.95533332147964,3.22305328808468,4.59594519286172,5.53813589596716,3.33765543618917,2.39219233116994,1.857481811669,2.22233432843654,3.76736914009382,2.05041341581538,4.11800711771741,6.62915876976036,4.3384950220334,4.42239916174156,0.954670618015114,4.74503990371703,3.25311147402958,2.91614420218863,3.76358932826044,2.83871332870031,3.50647300600534,5.04186079924549,4.4498510137285,4.79575401179634,3.72803587852155,1.12738587736838,3.28936401296753,4.63283773279873,6.02798683866548,7.36210993823067,3.71703476079712,4.10750335260139,5.59878854828985,6.71099804324549,3.8653459332161,1.44015003128933,1.58005560314089,3.64905387522296,2.56777392912068,2.33857481360031,1.61124026100733,0.596044064343795,1.20195449519969,0.886137163047463,1.21159739937777,0.914481679859998,1.10908803650525,1.36441033035653,1.25075394132428,1.16876902181569,2.0405734525369,1.55390167361845,1.07656627931371,1.51096154727671,3.47741269257943,2.064507229963,4.02933573387983,4.07299920250225,2.50786052017682,6.7770221114048,5.9842280745933,6.30185064783336,7.90524638780963,5.48066015816514,4.5323633843382,6.75022500231806,5.40385443869065,6.79713613476307,3.10656187051092,3.52876981786201,6.3843979744165,5.29274177837816,3.8897074730927,4.82110274044359,4.77993121970037,3.77819437262746,3.09052585858341,5.13470735346904,3.03236654116557,2.78827229879264,4.33840585187975,4.21386783614471,4.54578582074572,5.05432126809397,4.76293691283074,4.86714168968393,4.82273051159263,4.12085900803307,4.12156976376312,1.02860775715625,2.30718548007139,2.62279808942053,3.0522747492789,3.85848459702856,4.65380343404221,4.75612729469209,3.6829759601298,2.44447404922551,2.80571135828869,4.1522256343461,4.53120618927592,5.32000356120596,3.56354734727722,2.50778594275484,7.49431733813838,4.44470056046276,4.29742108096597,2.29545998482612,4.85301122062934,3.94175320554716
|short_description=p1@Lhpp
}}

Revision as of 12:05, 14 September 2013

Short description:p1@Lhpp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lhpp_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000033241, ENSMUST00000148669, NM_029609, uc009kce.1_5end
EntrezGene:Lhpp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lhpp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.89
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F95.29
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.57
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D710.54
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F56.48
adrenal gland, neonate N00.CNhs11191.1311-23C16.00
adrenal gland, neonate N25.CNhs11223.1377-27I38.92
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H17.09
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.08
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F113.70
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E35.84
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G14.93
heart, neonate N16.CNhs11209.782-15G13.89
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G112.97
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E97.41
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I75.82
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I45.38
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.96
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.42
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A95.04
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D96.71
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I83.53
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.18e-0823
neuroblast (sensu Vertebrata)1.18e-0823

Uber anatomy
Ontology termp-valuen
gray matter6.37e-1134
brain grey matter5.96e-0829
regional part of telencephalon5.96e-0829
telencephalon5.96e-0829
structure with developmental contribution from neural crest7.36e-0892
intestine7.33e-0731







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:139802303..139802345,%2B&oldid=3043717"