FFCP PHASE1:Mm9::chr9:116054559..116054586,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2067|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:116054559..116054586,+|id=chr9:116054559..116054586,+|ontology_enrichment_celltype=CL:0000988!2.60e-08!32;CL:0002032!2.60e-08!32;CL:0000037!2.60e-08!32;CL:0000566!2.60e-08!32;CL:0000837!2.60e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,9.71e-21,32;CL:0002032,9.71e-21,32;CL:0000037,9.71e-21,32;CL:0000837,9.71e-21,32;CL:0000049,4.59e-17,19;CL:0002320,9.20e-14,46;CL:0000134,9.20e-14,46;CL:0002031,7.06e-13,25;CL:0000553,5.32e-12,6;CL:0000556,5.32e-12,6;CL:0000219,2.14e-11,54;CL:0000034,4.84e-10,97;CL:0000763,2.77e-09,16;CL:0000839,3.26e-08,13;CL:0000050,4.89e-08,9;CL:0000723,6.27e-07,91;CL:0000048,6.27e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.54e-13!45;UBERON:0003061!4.54e-13!45;UBERON:0002193!1.13e-12!48;UBERON:0002405!5.43e-10!70;UBERON:0003081!1.18e-07!88;UBERON:0004177!2.66e-07!29;UBERON:0002371!5.53e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.20e-14,46;UBERON:0002371,2.77e-09,16;UBERON:0001474,6.83e-09,22;UBERON:0004765,6.83e-09,22;UBERON:0001434,6.83e-09,22|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0.34243593645101,0,0.513602189793617,0.34968160967599,0.666219523631325,1.01237633694913,0,6.62470547252299,3.42786084014347,5.51706547337439,0,5.95745707205312,5.74639536105658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,5.20126078778983,0,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,1.76922110389975,0,0.220841518460394,0.484875253135222,0,0,0,0,2.27648736561249,1.79970819298022,1.01656181658452,0.149790639404823,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0.61734640922383,0,1.40442637462647,0.772043721344145,0.852490498186778,0.621377317606506,0,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0.393117990226406,0.224862112384854,0,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0.476087281772027,0,0.630540576424764,0.664394068946325,0.478364305972461,0.655453258862952,0.518054945597687,0.433947175744535,0,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0,0,0,0.854354403989263,0.412773735926445,1.66675074632741,0.188368457004691,0.956859594047176,0.915112692826091,1.35982743995084,1.39951452323658,1.65839968565309,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0.608175645870493,0.616265742988964,0.51968329191118,0.358053391334963,0,0.961563596159751,0.147689527174577,0.302899349844443,0.304827226619999,0.201652370273681,0.0974578807397524,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0,0.0941093804153306,0.423073039458382,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0.695603506861264|short_description=p@chr9:116054559..116054586,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2067 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:116054559..116054586,+ | |||
|id=chr9:116054559..116054586,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.60e-08!32;CL:0002032!2.60e-08!32;CL:0000037!2.60e-08!32;CL:0000566!2.60e-08!32;CL:0000837!2.60e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.71e-21,32;CL:0002032,9.71e-21,32;CL:0000037,9.71e-21,32;CL:0000837,9.71e-21,32;CL:0000049,4.59e-17,19;CL:0002320,9.20e-14,46;CL:0000134,9.20e-14,46;CL:0002031,7.06e-13,25;CL:0000553,5.32e-12,6;CL:0000556,5.32e-12,6;CL:0000219,2.14e-11,54;CL:0000034,4.84e-10,97;CL:0000763,2.77e-09,16;CL:0000839,3.26e-08,13;CL:0000050,4.89e-08,9;CL:0000723,6.27e-07,91;CL:0000048,6.27e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.54e-13!45;UBERON:0003061!4.54e-13!45;UBERON:0002193!1.13e-12!48;UBERON:0002405!5.43e-10!70;UBERON:0003081!1.18e-07!88;UBERON:0004177!2.66e-07!29;UBERON:0002371!5.53e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.20e-14,46;UBERON:0002371,2.77e-09,16;UBERON:0001474,6.83e-09,22;UBERON:0004765,6.83e-09,22;UBERON:0001434,6.83e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0.234064526321993,0.34243593645101,0,0.513602189793617,0.34968160967599,0.666219523631325,1.01237633694913,0,6.62470547252299,3.42786084014347,5.51706547337439,0,5.95745707205312,5.74639536105658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,5.20126078778983,0,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0.103689612308478,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,1.76922110389975,0,0.220841518460394,0.484875253135222,0,0,0,0,2.27648736561249,1.79970819298022,1.01656181658452,0.149790639404823,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0.61734640922383,0,1.40442637462647,0.772043721344145,0.852490498186778,0.621377317606506,0,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0.393117990226406,0.224862112384854,0,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0.476087281772027,0,0.630540576424764,0.664394068946325,0.478364305972461,0.655453258862952,0.518054945597687,0.433947175744535,0,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0,0,0,0.854354403989263,0.412773735926445,1.66675074632741,0.188368457004691,0.956859594047176,0.915112692826091,1.35982743995084,1.39951452323658,1.65839968565309,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0.608175645870493,0.616265742988964,0.51968329191118,0.358053391334963,0,0.961563596159751,0.147689527174577,0.302899349844443,0.304827226619999,0.201652370273681,0.0974578807397524,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0,0.0941093804153306,0.423073039458382,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0.695603506861264 | |||
|short_description=p@chr9:116054559..116054586,+ | |||
}} |
Revision as of 17:06, 14 September 2013
Short description: | p@chr9:116054559..116054586, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:116054559..116054586, + |
Coexpression cluster: | MCL_coexpression_mm9:2067 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.71e-21 | 32 |
hematopoietic oligopotent progenitor cell | 9.71e-21 | 32 |
hematopoietic stem cell | 9.71e-21 | 32 |
hematopoietic multipotent progenitor cell | 9.71e-21 | 32 |
common myeloid progenitor | 4.59e-17 | 19 |
connective tissue cell | 9.20e-14 | 46 |
mesenchymal cell | 9.20e-14 | 46 |
hematopoietic lineage restricted progenitor cell | 7.06e-13 | 25 |
megakaryocyte progenitor cell | 5.32e-12 | 6 |
megakaryocyte | 5.32e-12 | 6 |
motile cell | 2.14e-11 | 54 |
stem cell | 4.84e-10 | 97 |
myeloid cell | 2.77e-09 | 16 |
myeloid lineage restricted progenitor cell | 3.26e-08 | 13 |
megakaryocyte-erythroid progenitor cell | 4.89e-08 | 9 |
somatic stem cell | 6.27e-07 | 91 |
multi fate stem cell | 6.27e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.20e-14 | 46 |
bone marrow | 2.77e-09 | 16 |
bone element | 6.83e-09 | 22 |
skeletal element | 6.83e-09 | 22 |
skeletal system | 6.83e-09 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.