FFCP PHASE1:Mm9::chr2:163456664..163456677,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=48|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:163456664..163456677,+|id=chr2:163456664..163456677,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000945,5.15e-19,1;CL:0000236,5.15e-19,1;CL:0000826,5.15e-19,1;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3;CL:0002293,4.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003199,1.74e-18,1;UBERON:0001962,6.19e-10,2;UBERON:0001961,6.19e-10,2;UBERON:0001744,6.19e-10,2;UBERON:0002465,4.77e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.262261207256992,0,0.202475267389826,0.699561878128147,0.315462165358238,0.685572168028694,0.42438965179803,0.0850432901510698,0.297872853602656,0.522399578277871,0.47997726838022,1.14704640533585,0,0.430761996159075,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,9.89917375740644,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,1.72084775396277,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0.635351135365324,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.852490498186778,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0.482354319504834,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0.234714477291508,0.2604087696879,0,0.241584120826006,0,0,0.405450430580328,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr2:163456664..163456677,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:163456664..163456677,+ | |||
|id=chr2:163456664..163456677,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.15e-19,1;CL:0000236,5.15e-19,1;CL:0000826,5.15e-19,1;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3;CL:0002293,4.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003199,1.74e-18,1;UBERON:0001962,6.19e-10,2;UBERON:0001961,6.19e-10,2;UBERON:0001744,6.19e-10,2;UBERON:0002465,4.77e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0.262261207256992,0,0.202475267389826,0.699561878128147,0.315462165358238,0.685572168028694,0.42438965179803,0.0850432901510698,0.297872853602656,0.522399578277871,0.47997726838022,1.14704640533585,0,0.430761996159075,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,9.89917375740644,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,1.72084775396277,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0,0,0.635351135365324,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.852490498186778,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0.482354319504834,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0.234714477291508,0.2604087696879,0,0.241584120826006,0,0,0.405450430580328,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr2:163456664..163456677,+ | |||
}} |
Revision as of 22:46, 13 September 2013
Short description: | p@chr2:163456664..163456677, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:163456664..163456677, + |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.15e-19 | 1 |
B cell | 5.15e-19 | 1 |
pro-B cell | 5.15e-19 | 1 |
fibroblast | 7.74e-19 | 1 |
hepatic stellate cell | 7.74e-19 | 1 |
secretory cell | 3.64e-07 | 3 |
stromal cell | 3.64e-07 | 3 |
extracellular matrix secreting cell | 3.64e-07 | 3 |
epithelial cell of thymus | 4.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chamber | 1.74e-18 | 1 |
gut-associated lymphoid tissue | 6.19e-10 | 2 |
mucosa-associated lymphoid tissue | 6.19e-10 | 2 |
lymphoid tissue | 6.19e-10 | 2 |
lymphoid system | 4.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.