FFCP PHASE1:Mm9::chr8:125956526..125956533,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=342|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:125956526..125956533,-|id=chr8:125956526..125956533,-|ontology_enrichment_celltype=CL:0000864!1.80e-25!2;CL:0000878!1.80e-25!2;CL:0000129!1.80e-25!2;CL:0002494!5.00e-18!3;CL:0000737!5.00e-18!3;CL:0000746!5.00e-18!3;CL:0000513!5.00e-18!3;CL:0002092!1.08e-17!3;CL:0002540!1.08e-17!3;CL:0002453!1.79e-14!8;CL:0002194!2.76e-13!4;CL:0000766!2.76e-13!4;CL:0000576!2.76e-13!4;CL:0000235!2.76e-13!4;CL:0002009!2.76e-13!4;CL:0000040!2.76e-13!4;CL:0000559!2.76e-13!4;CL:0000333!9.94e-12!10;CL:0000095!9.94e-12!10;CL:0000243!9.94e-12!10;CL:0000123!9.94e-12!10;CL:0000125!9.94e-12!10;CL:0000030!9.94e-12!10;CL:0000339!9.94e-12!10;CL:0000680!1.61e-09!6;CL:0000183!1.61e-09!6;CL:0000187!1.61e-09!6;CL:0000056!1.61e-09!6;CL:0000222!2.72e-08!7;CL:0000557!5.24e-08!7|ontology_enrichment_celltype_v019_2=CL:0002494,1.70e-39,3;CL:0000737,1.70e-39,3;CL:0000746,1.70e-39,3;CL:0000513,1.70e-39,3;CL:0000680,1.98e-20,6;CL:0000187,1.98e-20,6;CL:0000056,1.98e-20,6;CL:0000222,1.08e-17,7;CL:0000355,4.91e-14,9;CL:0002092,7.15e-11,3;CL:0002540,7.15e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!2.40e-14!32;UBERON:0002371!6.46e-13!16;UBERON:0001474!1.59e-09!22;UBERON:0004765!1.59e-09!22;UBERON:0001434!1.59e-09!22|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.91e-14,9;UBERON:0002036,4.91e-14,9;UBERON:0002385,4.91e-14,9;UBERON:0000486,4.91e-14,9;UBERON:0007503,4.91e-14,9;UBERON:0001015,4.91e-14,9;UBERON:0002329,4.91e-14,9;UBERON:0003082,4.91e-14,9;UBERON:0003059,4.91e-14,9;UBERON:0007282,4.91e-14,9;UBERON:0004290,4.91e-14,9;UBERON:0009618,4.91e-14,9;UBERON:0000383,9.45e-13,10;UBERON:0007524,1.07e-11,11;UBERON:0003077,1.07e-11,11;UBERON:0007285,1.07e-11,11;UBERON:0002204,3.42e-09,32;UBERON:0007100,1.41e-07,18;UBERON:0000948,1.41e-07,18;UBERON:0005498,1.41e-07,18;UBERON:0004140,1.41e-07,18;UBERON:0009881,1.41e-07,18;UBERON:0004141,1.41e-07,18;UBERON:0003084,1.41e-07,18;UBERON:0007005,1.41e-07,18;UBERON:0004139,1.41e-07,18;UBERON:0004291,1.41e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,3.08711323243136,0,13.4074743992135,0,0,0,0,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:125956526..125956533,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=342 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:125956526..125956533,- | |||
|id=chr8:125956526..125956533,- | |||
|ontology_enrichment_celltype=CL:0000864!1.80e-25!2;CL:0000878!1.80e-25!2;CL:0000129!1.80e-25!2;CL:0002494!5.00e-18!3;CL:0000737!5.00e-18!3;CL:0000746!5.00e-18!3;CL:0000513!5.00e-18!3;CL:0002092!1.08e-17!3;CL:0002540!1.08e-17!3;CL:0002453!1.79e-14!8;CL:0002194!2.76e-13!4;CL:0000766!2.76e-13!4;CL:0000576!2.76e-13!4;CL:0000235!2.76e-13!4;CL:0002009!2.76e-13!4;CL:0000040!2.76e-13!4;CL:0000559!2.76e-13!4;CL:0000333!9.94e-12!10;CL:0000095!9.94e-12!10;CL:0000243!9.94e-12!10;CL:0000123!9.94e-12!10;CL:0000125!9.94e-12!10;CL:0000030!9.94e-12!10;CL:0000339!9.94e-12!10;CL:0000680!1.61e-09!6;CL:0000183!1.61e-09!6;CL:0000187!1.61e-09!6;CL:0000056!1.61e-09!6;CL:0000222!2.72e-08!7;CL:0000557!5.24e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.70e-39,3;CL:0000737,1.70e-39,3;CL:0000746,1.70e-39,3;CL:0000513,1.70e-39,3;CL:0000680,1.98e-20,6;CL:0000187,1.98e-20,6;CL:0000056,1.98e-20,6;CL:0000222,1.08e-17,7;CL:0000355,4.91e-14,9;CL:0002092,7.15e-11,3;CL:0002540,7.15e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.40e-14!32;UBERON:0002371!6.46e-13!16;UBERON:0001474!1.59e-09!22;UBERON:0004765!1.59e-09!22;UBERON:0001434!1.59e-09!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.91e-14,9;UBERON:0002036,4.91e-14,9;UBERON:0002385,4.91e-14,9;UBERON:0000486,4.91e-14,9;UBERON:0007503,4.91e-14,9;UBERON:0001015,4.91e-14,9;UBERON:0002329,4.91e-14,9;UBERON:0003082,4.91e-14,9;UBERON:0003059,4.91e-14,9;UBERON:0007282,4.91e-14,9;UBERON:0004290,4.91e-14,9;UBERON:0009618,4.91e-14,9;UBERON:0000383,9.45e-13,10;UBERON:0007524,1.07e-11,11;UBERON:0003077,1.07e-11,11;UBERON:0007285,1.07e-11,11;UBERON:0002204,3.42e-09,32;UBERON:0007100,1.41e-07,18;UBERON:0000948,1.41e-07,18;UBERON:0005498,1.41e-07,18;UBERON:0004140,1.41e-07,18;UBERON:0009881,1.41e-07,18;UBERON:0004141,1.41e-07,18;UBERON:0003084,1.41e-07,18;UBERON:0007005,1.41e-07,18;UBERON:0004139,1.41e-07,18;UBERON:0004291,1.41e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,3.08711323243136,0,13.4074743992135,0,0,0,0,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:125956526..125956533,- | |||
}} |
Revision as of 15:04, 14 September 2013
Short description: | p@chr8:125956526..125956533, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:125956526..125956533, - |
Coexpression cluster: | MCL_coexpression_mm9:342 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.70e-39 | 3 |
striated muscle cell | 1.70e-39 | 3 |
cardiac muscle cell | 1.70e-39 | 3 |
cardiac muscle myoblast | 1.70e-39 | 3 |
muscle precursor cell | 1.98e-20 | 6 |
muscle cell | 1.98e-20 | 6 |
myoblast | 1.98e-20 | 6 |
mesodermal cell | 1.08e-17 | 7 |
multi-potent skeletal muscle stem cell | 4.91e-14 | 9 |
bone marrow cell | 7.15e-11 | 3 |
mesenchymal stem cell of the bone marrow | 7.15e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.91e-14 | 9 |
striated muscle tissue | 4.91e-14 | 9 |
muscle tissue | 4.91e-14 | 9 |
multilaminar epithelium | 4.91e-14 | 9 |
epithelial vesicle | 4.91e-14 | 9 |
musculature | 4.91e-14 | 9 |
somite | 4.91e-14 | 9 |
myotome | 4.91e-14 | 9 |
presomitic mesoderm | 4.91e-14 | 9 |
presumptive segmental plate | 4.91e-14 | 9 |
dermomyotome | 4.91e-14 | 9 |
trunk paraxial mesoderm | 4.91e-14 | 9 |
musculature of body | 9.45e-13 | 10 |
dense mesenchyme tissue | 1.07e-11 | 11 |
paraxial mesoderm | 1.07e-11 | 11 |
presumptive paraxial mesoderm | 1.07e-11 | 11 |
musculoskeletal system | 3.42e-09 | 32 |
primary circulatory organ | 1.41e-07 | 18 |
heart | 1.41e-07 | 18 |
primitive heart tube | 1.41e-07 | 18 |
primary heart field | 1.41e-07 | 18 |
anterior lateral plate mesoderm | 1.41e-07 | 18 |
heart tube | 1.41e-07 | 18 |
heart primordium | 1.41e-07 | 18 |
cardiac mesoderm | 1.41e-07 | 18 |
cardiogenic plate | 1.41e-07 | 18 |
heart rudiment | 1.41e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.