FFCP PHASE1:Mm9::chr13:13582375..13582392,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:13582375..13582392,+|id=chr13:13582375..13582392,+|ontology_enrichment_celltype=CL:0000107!2.33e-13!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.72e-41,9;CL:0002319,1.61e-11,43;CL:0000221,3.21e-11,44;CL:0000133,3.21e-11,44;CL:0000540,2.10e-10,33;CL:0000047,2.10e-10,33;CL:0000031,2.10e-10,33;CL:0000404,2.10e-10,33;CL:0000393,1.31e-08,39;CL:0000211,1.31e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!2.33e-13!9;UBERON:0000010!6.42e-13!11;UBERON:0000970!4.07e-12!9;UBERON:0000019!4.07e-12!9;UBERON:0000047!4.07e-12!9;UBERON:0004088!4.07e-12!9;UBERON:0002104!4.07e-12!9;UBERON:0001456!4.07e-12!9;UBERON:0003072!4.07e-12!9;UBERON:0003071!4.07e-12!9;UBERON:0004128!4.07e-12!9;UBERON:0001444!1.80e-09!11;UBERON:0000020!1.75e-08!12;UBERON:0001032!1.75e-08!12;UBERON:0004456!1.75e-08!12;UBERON:0005085!1.19e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.72e-41,9;UBERON:0000010,1.37e-33,11;UBERON:0000970,6.87e-25,9;UBERON:0000019,6.87e-25,9;UBERON:0000047,6.87e-25,9;UBERON:0010312,6.87e-25,9;UBERON:0004088,6.87e-25,9;UBERON:0002104,6.87e-25,9;UBERON:0001456,6.87e-25,9;UBERON:0003072,6.87e-25,9;UBERON:0004128,6.87e-25,9;UBERON:0003071,6.87e-25,9;UBERON:0001444,2.99e-20,11;UBERON:0000020,1.65e-18,12;UBERON:0001032,1.65e-18,12;UBERON:0004456,1.65e-18,12;UBERON:0000033,4.93e-17,13;UBERON:0005085,4.93e-17,13;UBERON:0000013,5.14e-15,3;UBERON:0000011,6.38e-15,3;UBERON:0010313,1.67e-14,3;UBERON:0002342,1.67e-14,3;UBERON:0002005,1.67e-14,3;UBERON:0005428,1.67e-14,3;UBERON:0005062,1.67e-14,3;UBERON:0004121,1.69e-13,95;UBERON:0000924,1.69e-13,95;UBERON:0006601,1.69e-13,95;UBERON:0002346,3.71e-07,64;UBERON:0003075,3.71e-07,64;UBERON:0007284,3.71e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,1.14951052216736,1.98068342785884,1.50704817835715,3.46986145671772,4.48398020996974,2.99845518591132,2.58703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31304619582064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,1.26203287766503,3.12350995437311,2.58508077279359,2.15071918157297,2.89638276307112,3.39691836946599,2.42886421004937,3.50707029493574,2.76701444562566,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.436039249896986,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0,0.499621155875892,0,0,0,0,0|short_description=p@chr13:13582375..13582392,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:13582375..13582392,+ | |||
|id=chr13:13582375..13582392,+ | |||
|ontology_enrichment_celltype=CL:0000107!2.33e-13!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.72e-41,9;CL:0002319,1.61e-11,43;CL:0000221,3.21e-11,44;CL:0000133,3.21e-11,44;CL:0000540,2.10e-10,33;CL:0000047,2.10e-10,33;CL:0000031,2.10e-10,33;CL:0000404,2.10e-10,33;CL:0000393,1.31e-08,39;CL:0000211,1.31e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!2.33e-13!9;UBERON:0000010!6.42e-13!11;UBERON:0000970!4.07e-12!9;UBERON:0000019!4.07e-12!9;UBERON:0000047!4.07e-12!9;UBERON:0004088!4.07e-12!9;UBERON:0002104!4.07e-12!9;UBERON:0001456!4.07e-12!9;UBERON:0003072!4.07e-12!9;UBERON:0003071!4.07e-12!9;UBERON:0004128!4.07e-12!9;UBERON:0001444!1.80e-09!11;UBERON:0000020!1.75e-08!12;UBERON:0001032!1.75e-08!12;UBERON:0004456!1.75e-08!12;UBERON:0005085!1.19e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.72e-41,9;UBERON:0000010,1.37e-33,11;UBERON:0000970,6.87e-25,9;UBERON:0000019,6.87e-25,9;UBERON:0000047,6.87e-25,9;UBERON:0010312,6.87e-25,9;UBERON:0004088,6.87e-25,9;UBERON:0002104,6.87e-25,9;UBERON:0001456,6.87e-25,9;UBERON:0003072,6.87e-25,9;UBERON:0004128,6.87e-25,9;UBERON:0003071,6.87e-25,9;UBERON:0001444,2.99e-20,11;UBERON:0000020,1.65e-18,12;UBERON:0001032,1.65e-18,12;UBERON:0004456,1.65e-18,12;UBERON:0000033,4.93e-17,13;UBERON:0005085,4.93e-17,13;UBERON:0000013,5.14e-15,3;UBERON:0000011,6.38e-15,3;UBERON:0010313,1.67e-14,3;UBERON:0002342,1.67e-14,3;UBERON:0002005,1.67e-14,3;UBERON:0005428,1.67e-14,3;UBERON:0005062,1.67e-14,3;UBERON:0004121,1.69e-13,95;UBERON:0000924,1.69e-13,95;UBERON:0006601,1.69e-13,95;UBERON:0002346,3.71e-07,64;UBERON:0003075,3.71e-07,64;UBERON:0007284,3.71e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,1.14951052216736,1.98068342785884,1.50704817835715,3.46986145671772,4.48398020996974,2.99845518591132,2.58703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31304619582064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,1.26203287766503,3.12350995437311,2.58508077279359,2.15071918157297,2.89638276307112,3.39691836946599,2.42886421004937,3.50707029493574,2.76701444562566,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.436039249896986,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr13:13582375..13582392,+ | |||
}} |
Revision as of 00:01, 13 September 2013
Short description: | p@chr13:13582375..13582392, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:13582375..13582392, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.72e-41 | 9 |
neural cell | 1.61e-11 | 43 |
ectodermal cell | 3.21e-11 | 44 |
neurectodermal cell | 3.21e-11 | 44 |
neuron | 2.10e-10 | 33 |
neuronal stem cell | 2.10e-10 | 33 |
neuroblast | 2.10e-10 | 33 |
electrically signaling cell | 2.10e-10 | 33 |
electrically responsive cell | 1.31e-08 | 39 |
electrically active cell | 1.31e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.72e-41 | 9 |
peripheral nervous system | 1.37e-33 | 11 |
eye | 6.87e-25 | 9 |
camera-type eye | 6.87e-25 | 9 |
simple eye | 6.87e-25 | 9 |
immature eye | 6.87e-25 | 9 |
ocular region | 6.87e-25 | 9 |
visual system | 6.87e-25 | 9 |
face | 6.87e-25 | 9 |
optic cup | 6.87e-25 | 9 |
optic vesicle | 6.87e-25 | 9 |
eye primordium | 6.87e-25 | 9 |
subdivision of head | 2.99e-20 | 11 |
sense organ | 1.65e-18 | 12 |
sensory system | 1.65e-18 | 12 |
entire sense organ system | 1.65e-18 | 12 |
head | 4.93e-17 | 13 |
ectodermal placode | 4.93e-17 | 13 |
sympathetic nervous system | 5.14e-15 | 3 |
parasympathetic nervous system | 6.38e-15 | 3 |
neural crest-derived structure | 1.67e-14 | 3 |
neural crest | 1.67e-14 | 3 |
enteric nervous system | 1.67e-14 | 3 |
vagal neural crest | 1.67e-14 | 3 |
neural fold | 1.67e-14 | 3 |
ectoderm-derived structure | 1.69e-13 | 95 |
ectoderm | 1.69e-13 | 95 |
presumptive ectoderm | 1.69e-13 | 95 |
neurectoderm | 3.71e-07 | 64 |
neural plate | 3.71e-07 | 64 |
presumptive neural plate | 3.71e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.