FFCP PHASE1:Mm9::chr11:97660900..97660911,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16796|HGNC=|MCL_coexpression_id=2|UniProt=Q61792|association_with_transcript=21bp_to_ENSMUST00000043843_5end|description=CAGE_peak_6_at_Lasp1_5end|id=chr11:97660900..97660911,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,3.40e-07,23;CL:0000337,3.40e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!3.75e-20!86;UBERON:0001049!1.59e-18!52;UBERON:0005068!1.59e-18!52;UBERON:0006241!1.59e-18!52;UBERON:0007135!1.59e-18!52;UBERON:0000153!1.76e-18!94;UBERON:0000955!4.66e-17!50;UBERON:0006238!4.66e-17!50;UBERON:0002616!1.87e-16!49;UBERON:0003080!1.72e-15!40;UBERON:0000033!7.17e-15!63;UBERON:0002780!7.19e-15!39;UBERON:0001890!7.19e-15!39;UBERON:0006240!7.19e-15!39;UBERON:0002020!5.50e-14!34;UBERON:0001017!7.95e-14!73;UBERON:0005743!7.95e-14!73;UBERON:0003056!1.10e-13!49;UBERON:0002346!2.41e-13!71;UBERON:0003075!2.41e-13!71;UBERON:0007284!2.41e-13!71;UBERON:0000073!6.76e-13!75;UBERON:0001016!6.76e-13!75;UBERON:0002791!2.12e-12!29;UBERON:0003528!2.12e-12!29;UBERON:0001893!2.12e-12!29;UBERON:0004121!3.24e-10!102;UBERON:0000924!3.24e-10!102;UBERON:0006601!3.24e-10!102;UBERON:0000064!1.31e-09!99;UBERON:0000956!9.79e-09!21;UBERON:0001869!9.79e-09!21;UBERON:0000203!9.79e-09!21;UBERON:0002021!2.16e-08!10;UBERON:0000411!2.16e-08!10;UBERON:0001950!2.16e-08!10;UBERON:0002619!7.56e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.41e-23,54;UBERON:0001049,2.26e-22,52;UBERON:0005068,2.26e-22,52;UBERON:0006241,2.26e-22,52;UBERON:0007135,2.26e-22,52;UBERON:0001017,1.14e-21,73;UBERON:0000955,3.85e-21,47;UBERON:0006238,3.85e-21,47;UBERON:0001016,8.77e-21,75;UBERON:0002616,5.04e-20,46;UBERON:0002020,2.40e-19,34;UBERON:0003080,4.30e-19,40;UBERON:0003528,2.22e-18,29;UBERON:0002791,2.22e-18,29;UBERON:0001893,2.22e-18,29;UBERON:0002780,6.01e-18,39;UBERON:0001890,6.01e-18,39;UBERON:0006240,6.01e-18,39;UBERON:0002346,2.42e-16,64;UBERON:0003075,2.42e-16,64;UBERON:0007284,2.42e-16,64;UBERON:0002021,2.57e-16,10;UBERON:0000411,2.57e-16,10;UBERON:0001950,2.57e-16,10;UBERON:0003056,3.87e-14,49;UBERON:0004121,5.05e-14,95;UBERON:0000924,5.05e-14,95;UBERON:0006601,5.05e-14,95;UBERON:0002619,6.48e-14,17;UBERON:0010371,3.68e-13,73;UBERON:0000956,1.94e-12,21;UBERON:0001869,1.94e-12,21;UBERON:0000203,1.94e-12,21;UBERON:0002370,6.39e-09,23;UBERON:0000974,6.39e-09,23;UBERON:0004807,6.39e-09,23;UBERON:0005058,6.39e-09,23;UBERON:0003351,6.39e-09,23;UBERON:0009113,6.39e-09,23;UBERON:0003295,6.39e-09,23;UBERON:0009722,6.39e-09,23;UBERON:0005562,6.39e-09,23;UBERON:0007690,6.39e-09,23;UBERON:0011216,1.38e-08,194;UBERON:0010314,1.39e-08,92;UBERON:0006562,2.12e-08,24;UBERON:0003408,2.12e-08,24;UBERON:0001557,2.12e-08,24;UBERON:0001042,2.12e-08,24;UBERON:0008814,2.12e-08,24;UBERON:0009145,2.12e-08,24;UBERON:0000483,1.09e-07,174;UBERON:0000119,1.85e-07,176;UBERON:0002420,3.10e-07,8;UBERON:0007245,3.10e-07,8;UBERON:0010009,3.10e-07,8;UBERON:0010011,3.10e-07,8;UBERON:0000454,3.10e-07,8;UBERON:0000072,4.44e-07,27|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.774739940649458,0.563154888606667,0.234064526321993,0.513653904676515,0,2.73921167889929,0.961624426608971,0.333109761815663,0,0,0.157731082679119,0.548457734422955,0.84877930359606,0.595303031057488,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,1.25559489221072,1.5626706890476,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,0.167782606057736,0,2.68875039313971,0,0,0,1.21389876515759,1.5869729378161,1.90149421051854,0.338844532069132,0,0.449949858640699,0,0,0,0,0.622137673850866,0.675029691658453,0.420649922702764,0.571301968807607,1.10434270475807,1.10241719293459,0.670918297127655,0,0,2.93680877595932,1.84327839907492,0.923204014111357,1.55528994124096,1.56274011167028,1.11673199600552,1.12552522006336,1.22238598221448,0.589257170947335,1.28134512719193,1.67759501242771,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,1.55362730188303,0.148442139064825,0,0.913396434936424,0,0.301445281105245,0.587943535678524,0.376999773989026,0.494389935468748,0,0,0,0,0,0,0.585561594023094,1.25668024088073,0.510914110417183,0.359445373517761,0,0.508280908292259,3.14560342750128,6.40500843946077,11.9371634507221,6.08385120672968,6.90431734791892,2.90903262383384,3.24482526135515,0.509196819251581,0,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0.452114453507145,0.544291993210623,0.384341160854549,0.281105173679186,0.517406741478031,0,0.756424320671277,0,0,0.278047249225598,0,1.02891068203972,0.199034266818493,0,0,0.284163499395593,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.462801338662135,0,0,0.350296027101508,0.16455984991348,0,0,0.146199987425332,0,0.402619256281115,3.99550902271842,2.57261530948211,0.330418782983798,0.264450566663544,0,0.464473343720877,0.257734922644187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| ||
|EntrezGene=16796 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q61792 | |||
|association_with_transcript=21bp_to_ENSMUST00000043843_5end | |||
|description=CAGE_peak_6_at_Lasp1_5end | |||
|id=chr11:97660900..97660911,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.40e-07,23;CL:0000337,3.40e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!3.75e-20!86;UBERON:0001049!1.59e-18!52;UBERON:0005068!1.59e-18!52;UBERON:0006241!1.59e-18!52;UBERON:0007135!1.59e-18!52;UBERON:0000153!1.76e-18!94;UBERON:0000955!4.66e-17!50;UBERON:0006238!4.66e-17!50;UBERON:0002616!1.87e-16!49;UBERON:0003080!1.72e-15!40;UBERON:0000033!7.17e-15!63;UBERON:0002780!7.19e-15!39;UBERON:0001890!7.19e-15!39;UBERON:0006240!7.19e-15!39;UBERON:0002020!5.50e-14!34;UBERON:0001017!7.95e-14!73;UBERON:0005743!7.95e-14!73;UBERON:0003056!1.10e-13!49;UBERON:0002346!2.41e-13!71;UBERON:0003075!2.41e-13!71;UBERON:0007284!2.41e-13!71;UBERON:0000073!6.76e-13!75;UBERON:0001016!6.76e-13!75;UBERON:0002791!2.12e-12!29;UBERON:0003528!2.12e-12!29;UBERON:0001893!2.12e-12!29;UBERON:0004121!3.24e-10!102;UBERON:0000924!3.24e-10!102;UBERON:0006601!3.24e-10!102;UBERON:0000064!1.31e-09!99;UBERON:0000956!9.79e-09!21;UBERON:0001869!9.79e-09!21;UBERON:0000203!9.79e-09!21;UBERON:0002021!2.16e-08!10;UBERON:0000411!2.16e-08!10;UBERON:0001950!2.16e-08!10;UBERON:0002619!7.56e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.41e-23,54;UBERON:0001049,2.26e-22,52;UBERON:0005068,2.26e-22,52;UBERON:0006241,2.26e-22,52;UBERON:0007135,2.26e-22,52;UBERON:0001017,1.14e-21,73;UBERON:0000955,3.85e-21,47;UBERON:0006238,3.85e-21,47;UBERON:0001016,8.77e-21,75;UBERON:0002616,5.04e-20,46;UBERON:0002020,2.40e-19,34;UBERON:0003080,4.30e-19,40;UBERON:0003528,2.22e-18,29;UBERON:0002791,2.22e-18,29;UBERON:0001893,2.22e-18,29;UBERON:0002780,6.01e-18,39;UBERON:0001890,6.01e-18,39;UBERON:0006240,6.01e-18,39;UBERON:0002346,2.42e-16,64;UBERON:0003075,2.42e-16,64;UBERON:0007284,2.42e-16,64;UBERON:0002021,2.57e-16,10;UBERON:0000411,2.57e-16,10;UBERON:0001950,2.57e-16,10;UBERON:0003056,3.87e-14,49;UBERON:0004121,5.05e-14,95;UBERON:0000924,5.05e-14,95;UBERON:0006601,5.05e-14,95;UBERON:0002619,6.48e-14,17;UBERON:0010371,3.68e-13,73;UBERON:0000956,1.94e-12,21;UBERON:0001869,1.94e-12,21;UBERON:0000203,1.94e-12,21;UBERON:0002370,6.39e-09,23;UBERON:0000974,6.39e-09,23;UBERON:0004807,6.39e-09,23;UBERON:0005058,6.39e-09,23;UBERON:0003351,6.39e-09,23;UBERON:0009113,6.39e-09,23;UBERON:0003295,6.39e-09,23;UBERON:0009722,6.39e-09,23;UBERON:0005562,6.39e-09,23;UBERON:0007690,6.39e-09,23;UBERON:0011216,1.38e-08,194;UBERON:0010314,1.39e-08,92;UBERON:0006562,2.12e-08,24;UBERON:0003408,2.12e-08,24;UBERON:0001557,2.12e-08,24;UBERON:0001042,2.12e-08,24;UBERON:0008814,2.12e-08,24;UBERON:0009145,2.12e-08,24;UBERON:0000483,1.09e-07,174;UBERON:0000119,1.85e-07,176;UBERON:0002420,3.10e-07,8;UBERON:0007245,3.10e-07,8;UBERON:0010009,3.10e-07,8;UBERON:0010011,3.10e-07,8;UBERON:0000454,3.10e-07,8;UBERON:0000072,4.44e-07,27 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.774739940649458,0.563154888606667,0.234064526321993,0.513653904676515,0,2.73921167889929,0.961624426608971,0.333109761815663,0,0,0.157731082679119,0.548457734422955,0.84877930359606,0.595303031057488,0.397163804803541,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,1.25559489221072,1.5626706890476,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,0.167782606057736,0,2.68875039313971,0,0,0,1.21389876515759,1.5869729378161,1.90149421051854,0.338844532069132,0,0.449949858640699,0,0,0,0,0.622137673850866,0.675029691658453,0.420649922702764,0.571301968807607,1.10434270475807,1.10241719293459,0.670918297127655,0,0,2.93680877595932,1.84327839907492,0.923204014111357,1.55528994124096,1.56274011167028,1.11673199600552,1.12552522006336,1.22238598221448,0.589257170947335,1.28134512719193,1.67759501242771,0,0.151143120213571,0.869593466105033,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,1.55362730188303,0.148442139064825,0,0.913396434936424,0,0.301445281105245,0.587943535678524,0.376999773989026,0.494389935468748,0,0,0,0,0,0,0.585561594023094,1.25668024088073,0.510914110417183,0.359445373517761,0,0.508280908292259,3.14560342750128,6.40500843946077,11.9371634507221,6.08385120672968,6.90431734791892,2.90903262383384,3.24482526135515,0.509196819251581,0,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0.452114453507145,0.544291993210623,0.384341160854549,0.281105173679186,0.517406741478031,0,0.756424320671277,0,0,0.278047249225598,0,1.02891068203972,0.199034266818493,0,0,0.284163499395593,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.462801338662135,0,0,0.350296027101508,0.16455984991348,0,0,0.146199987425332,0,0.402619256281115,3.99550902271842,2.57261530948211,0.330418782983798,0.264450566663544,0,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0,0.474529061544512,0.494096864172033,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.379419222745544,0,0.156998727841375,0.246794327843601,0,0,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,0.390267295715598,0,0.664394068946325,0.318909537314974,0,0.345369963731791,0,0,0,0,0,1.9266070798535,2.57865710502847,0.655739781506702,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,2.89189184779626,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,1.70219802876894,0.540183282093931,0.776152102696527,0.643011105094777,0.177340233642274,1.07021290561242,0.493647061806363,0.913394847343798,0.938686832254841,0.63549621259146,0,0.49465875882444,0.161464426695906,0.422190474497091,0,0.492422699235184,0.291480836629851,2.22510362412612,0.170870880797853,0.412773735926445,0.740778109478847,0.188368457004691,0.27338845544205,0.457556346413045,0.509935289981566,0.419854356970974,0.414599921413271,0,0.316335993581135,0.406638934253697,0.540026704109006,0.418176592028937,0.436725127492355,0,0.165306911450672,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0.496375471371293,0.777804753376191,0.387479470433193,0.168956125490778,0.704143431874524,0.39061315453185,0.524296722128554,0,0,3.16011120628178,0.405450430580328,1.1298205288131,1.29920822977795,2.14832034800978,2.38417625737518,1.80293174279953,1.62458479892035,2.62512769865184,2.59103142626999,3.62974266492626,2.92373642219257,2.30908419936791,2.68816875017609,0,0.887943813496259,0.358855426437903,0.503653849092235,0.19318959403219,0,0,0,0,10.7302850097243,11.0478056761722,12.6037012956667,13.748254587495,9.59115527678899,15.107877947794,12.8254275044043,9.00642406448441,6.34399372577886,4.65984280576638,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0,1.2869045591501,1.33348036680969,0.824140228955577,0,0.505394423527595,0.50695859978048,0.754505365544305,0.280924522409647,0.768301828858431,0.574354689556133,1.42888107384922,0.463537303779422,0.38581844092741,0.412085900803307,0.588795680537589,1.02860775715625,0.70990322463735,0.476872379894642,0.581385666529314,0.282328141245992,0.507687647350059,0.182927972872773,0.789209134313529,0.407412341537585,1.12228454331548,0.830445126869219,0.788035859004508,2.04615521584845,0.464810523557898,0.771626443924566,1.74867404556562,2.10538447600868,0.429742108096597,0.57386499620653,0.220591419119515,0 | |||
|short_description=p6@Lasp1 | |||
}} |
Revision as of 21:45, 12 September 2013
Short description: | p6@Lasp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lasp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 21bp_to_ENSMUST00000043843_5end |
EntrezGene: | Lasp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.40e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.40e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.