FFCP PHASE1:Mm9::chr19:25458089..25458112,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=787|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:25458089..25458112,+|id=chr19:25458089..25458112,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!4.47e-10!23;UBERON:0007100!1.42e-08!18;UBERON:0000948!1.42e-08!18;UBERON:0005498!1.42e-08!18;UBERON:0004140!1.42e-08!18;UBERON:0009881!1.42e-08!18;UBERON:0004141!1.42e-08!18;UBERON:0003084!1.42e-08!18;UBERON:0007005!1.42e-08!18;UBERON:0004139!1.42e-08!18;UBERON:0004291!1.42e-08!18;UBERON:0000026!1.21e-07!13;UBERON:0004708!1.21e-07!13;UBERON:0002101!1.21e-07!13;UBERON:0004357!1.21e-07!13;UBERON:0009872!1.21e-07!13;UBERON:0004347!1.21e-07!13;UBERON:0005732!1.21e-07!13;UBERON:0005733!1.21e-07!13;UBERON:0004535!5.93e-07!23;UBERON:0001009!5.93e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.52e-14,22;UBERON:0000026,5.26e-11,12;UBERON:0004708,5.26e-11,12;UBERON:0002101,5.26e-11,12;UBERON:0004357,5.26e-11,12;UBERON:0004347,5.26e-11,12;UBERON:0005732,5.26e-11,12;UBERON:0005733,5.26e-11,12;UBERON:0007100,3.55e-10,18;UBERON:0000948,3.55e-10,18;UBERON:0005498,3.55e-10,18;UBERON:0004140,3.55e-10,18;UBERON:0009881,3.55e-10,18;UBERON:0004141,3.55e-10,18;UBERON:0003084,3.55e-10,18;UBERON:0007005,3.55e-10,18;UBERON:0004139,3.55e-10,18;UBERON:0004291,3.55e-10,18;UBERON:0010707,7.11e-10,13;UBERON:0004535,5.46e-09,23;UBERON:0001009,5.46e-09,23|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0,0,0,1.44932244350839,0,0,0,0.649776417447669,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04091196059682,0,0.461230994512117,0,0.470354828542819,0,2.96633961281249,1.87979163995885,2.65383165584962,6.79420769779119,3.5334642953663,6.78825354389311,0,0,0,0,0,0,0,0,0,0,0,0,0.62336413367868,0,0.509196819251581,5.22509276562391,0,0.210441855886474,2.60240885925407,0.459804208866946,1.0803727788321,1.05493372485001,0.884474488967262,0.512454881139399,0.749613796477831,0.258703370739016,0.431135985865684,4.9167580843633,5.63043597324636,6.57587197282724,5.83899223373756,5.92028683087683,5.35033554660653,0,0,0,0,9.73491130916859,7.97388603935727,7.92273070428465,6.8655973319711,4.32881309844288,5.09081472528348,3.95307706075693,3.21928081679543,3.03589890154641,5.59503489705834,2.46251196118643,1.37816976227955,1.60819986167866,1.09775057645525,1.20785776884335,0,0,0,0,1.70630600428187,0.696710015581316,0.515469845288373,0.201683524623343,0,0.380451252225118,0,0,0,0.397912944082302,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0,0,0,0.333690211432188,0,0.224862112384854,0.608580364165509,0.241177159752417,0,0.287696137450811,0,0,0,0.744281895337007,0.624075346229121,0.757736633841335,0.358794827043824,0.482443521363367,1.10851914099963,1.13694847062291,0.488894929326078,0.848725428875941,0.469380496577004,0.335012514883631,0.952174563544055,0.390267295715598,1.41871629695572,1.10732344824387,0.797273843287435,1.47476983244164,0.690739927463582,0.433947175744535,0,0,0,0,0,0,0,3.28212205365685,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,1.08036656418786,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.63549621259146,0,12.5313552235525,2.58343082713449,1.74907482291652,4.29740438411291,4.59594519286172,0.291480836629851,0,0,0,0.370389054739423,0.188368457004691,0,0,0,0,0,1.90934123603023,0.632671987162271,0.609958401380546,0.432021363287205,3.13632444021703,4.80397640241591,3.9110660451598,3.14083131756277,1.30877970992015,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0.316011120628178,1.62180172232131,1.84879722896689,0.25984164595559,0.537080087002444,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.304827226619999,0.403304740547362,0.194915761479505,0.0962118416403295,0,5.44152920676507,0,0,0,0.579568782096571,0,0.183151624267265,8.1459984050045,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,3.59122386060928,3.24393850932855,3.40349403895612,1.88651846365184,2.20612210140017,3.11145418922261,1.85431551515005,2.56735367673452,2.02157769411038,3.04175159868288,2.64076877940507,2.52832070168682,2.30490548657529,2.35485422718014,1.90517476513229,1.39061191133827,1.92909220463705,2.47251540481984,2.79677948255355,3.08582327146874,3.01708870470874,1.43061713968393,3.19762116591123,3.19971893412124,2.79228206042532,2.37806364734604,4.73525480588117,1.35804113845862,3.92799590160417,1.89816028998679,2.85662998889134,3.27384834535751,2.01417893541756,3.47231899766054,1.74867404556562,3.50897412668113,3.22306581072447,4.78220830172108,4.19123696327079,3.2461496986859|short_description=p@chr19:25458089..25458112,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=787 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:25458089..25458112,+ | |||
|id=chr19:25458089..25458112,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.47e-10!23;UBERON:0007100!1.42e-08!18;UBERON:0000948!1.42e-08!18;UBERON:0005498!1.42e-08!18;UBERON:0004140!1.42e-08!18;UBERON:0009881!1.42e-08!18;UBERON:0004141!1.42e-08!18;UBERON:0003084!1.42e-08!18;UBERON:0007005!1.42e-08!18;UBERON:0004139!1.42e-08!18;UBERON:0004291!1.42e-08!18;UBERON:0000026!1.21e-07!13;UBERON:0004708!1.21e-07!13;UBERON:0002101!1.21e-07!13;UBERON:0004357!1.21e-07!13;UBERON:0009872!1.21e-07!13;UBERON:0004347!1.21e-07!13;UBERON:0005732!1.21e-07!13;UBERON:0005733!1.21e-07!13;UBERON:0004535!5.93e-07!23;UBERON:0001009!5.93e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.52e-14,22;UBERON:0000026,5.26e-11,12;UBERON:0004708,5.26e-11,12;UBERON:0002101,5.26e-11,12;UBERON:0004357,5.26e-11,12;UBERON:0004347,5.26e-11,12;UBERON:0005732,5.26e-11,12;UBERON:0005733,5.26e-11,12;UBERON:0007100,3.55e-10,18;UBERON:0000948,3.55e-10,18;UBERON:0005498,3.55e-10,18;UBERON:0004140,3.55e-10,18;UBERON:0009881,3.55e-10,18;UBERON:0004141,3.55e-10,18;UBERON:0003084,3.55e-10,18;UBERON:0007005,3.55e-10,18;UBERON:0004139,3.55e-10,18;UBERON:0004291,3.55e-10,18;UBERON:0010707,7.11e-10,13;UBERON:0004535,5.46e-09,23;UBERON:0001009,5.46e-09,23 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0,0,0,1.44932244350839,0,0,0,0.649776417447669,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04091196059682,0,0.461230994512117,0,0.470354828542819,0,2.96633961281249,1.87979163995885,2.65383165584962,6.79420769779119,3.5334642953663,6.78825354389311,0,0,0,0,0,0,0,0,0,0,0,0,0.62336413367868,0,0.509196819251581,5.22509276562391,0,0.210441855886474,2.60240885925407,0.459804208866946,1.0803727788321,1.05493372485001,0.884474488967262,0.512454881139399,0.749613796477831,0.258703370739016,0.431135985865684,4.9167580843633,5.63043597324636,6.57587197282724,5.83899223373756,5.92028683087683,5.35033554660653,0,0,0,0,9.73491130916859,7.97388603935727,7.92273070428465,6.8655973319711,4.32881309844288,5.09081472528348,3.95307706075693,3.21928081679543,3.03589890154641,5.59503489705834,2.46251196118643,1.37816976227955,1.60819986167866,1.09775057645525,1.20785776884335,0,0,0,0,1.70630600428187,0.696710015581316,0.515469845288373,0.201683524623343,0,0.380451252225118,0,0,0,0.397912944082302,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0.147610147979602,0,0,0,0.333690211432188,0,0.224862112384854,0.608580364165509,0.241177159752417,0,0.287696137450811,0,0,0,0.744281895337007,0.624075346229121,0.757736633841335,0.358794827043824,0.482443521363367,1.10851914099963,1.13694847062291,0.488894929326078,0.848725428875941,0.469380496577004,0.335012514883631,0.952174563544055,0.390267295715598,1.41871629695572,1.10732344824387,0.797273843287435,1.47476983244164,0.690739927463582,0.433947175744535,0,0,0,0,0,0,0,3.28212205365685,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,1.08036656418786,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.63549621259146,0,12.5313552235525,2.58343082713449,1.74907482291652,4.29740438411291,4.59594519286172,0.291480836629851,0,0,0,0.370389054739423,0.188368457004691,0,0,0,0,0,1.90934123603023,0.632671987162271,0.609958401380546,0.432021363287205,3.13632444021703,4.80397640241591,3.9110660451598,3.14083131756277,1.30877970992015,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0.316011120628178,1.62180172232131,1.84879722896689,0.25984164595559,0.537080087002444,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.304827226619999,0.403304740547362,0.194915761479505,0.0962118416403295,0,5.44152920676507,0,0,0,0.579568782096571,0,0.183151624267265,8.1459984050045,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,3.59122386060928,3.24393850932855,3.40349403895612,1.88651846365184,2.20612210140017,3.11145418922261,1.85431551515005,2.56735367673452,2.02157769411038,3.04175159868288,2.64076877940507,2.52832070168682,2.30490548657529,2.35485422718014,1.90517476513229,1.39061191133827,1.92909220463705,2.47251540481984,2.79677948255355,3.08582327146874,3.01708870470874,1.43061713968393,3.19762116591123,3.19971893412124,2.79228206042532,2.37806364734604,4.73525480588117,1.35804113845862,3.92799590160417,1.89816028998679,2.85662998889134,3.27384834535751,2.01417893541756,3.47231899766054,1.74867404556562,3.50897412668113,3.22306581072447,4.78220830172108,4.19123696327079,3.2461496986859 | |||
|short_description=p@chr19:25458089..25458112,+ | |||
}} |
Revision as of 17:16, 13 September 2013
Short description: | p@chr19:25458089..25458112, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:25458089..25458112, + |
Coexpression cluster: | MCL_coexpression_mm9:787 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 4.52e-14 | 22 |
appendage | 5.26e-11 | 12 |
paired limb/fin | 5.26e-11 | 12 |
limb | 5.26e-11 | 12 |
paired limb/fin bud | 5.26e-11 | 12 |
limb bud | 5.26e-11 | 12 |
limb/fin field | 5.26e-11 | 12 |
limb field | 5.26e-11 | 12 |
primary circulatory organ | 3.55e-10 | 18 |
heart | 3.55e-10 | 18 |
primitive heart tube | 3.55e-10 | 18 |
primary heart field | 3.55e-10 | 18 |
anterior lateral plate mesoderm | 3.55e-10 | 18 |
heart tube | 3.55e-10 | 18 |
heart primordium | 3.55e-10 | 18 |
cardiac mesoderm | 3.55e-10 | 18 |
cardiogenic plate | 3.55e-10 | 18 |
heart rudiment | 3.55e-10 | 18 |
appendage girdle complex | 7.11e-10 | 13 |
cardiovascular system | 5.46e-09 | 23 |
circulatory system | 5.46e-09 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.