FFCP PHASE1:Mm9::chr4:114735446..114735466,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=115|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:114735446..114735466,+|id=chr4:114735446..114735466,+|ontology_enrichment_celltype=CL:0000049!3.85e-10!19;CL:0000763!3.98e-07!16|ontology_enrichment_celltype_v019_2=CL:0000049,8.70e-23,19;CL:0000557,1.83e-19,7;CL:0000988,3.57e-16,32;CL:0002032,3.57e-16,32;CL:0000037,3.57e-16,32;CL:0000837,3.57e-16,32;CL:0002320,5.38e-16,46;CL:0000134,5.38e-16,46;CL:0000219,2.16e-13,54;CL:0000034,7.49e-13,97;CL:0000763,4.98e-12,16;CL:0000723,1.10e-08,91;CL:0000048,1.10e-08,91;CL:0002092,1.31e-08,3;CL:0002540,1.31e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!7.04e-09!16;UBERON:0001474!1.39e-07!22;UBERON:0004765!1.39e-07!22;UBERON:0001434!1.39e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.20e-16,16;UBERON:0002384,5.38e-16,46;UBERON:0001474,9.42e-12,22;UBERON:0004765,9.42e-12,22;UBERON:0001434,9.42e-12,22;UBERON:0002204,7.07e-08,32|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,0,0.794327609607082,1.56719873483361,0,0,0,0,0,0,0,0,2.54012269383853,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,2.2497492932035,4.94433181283487,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0,0,0,0,1.83843757322004,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,3.83408398418945,2.99951365496704,2.66847476853436,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,1.40442637462647,2.57347907114715,3.9782889915383,0,0.469052119962192,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.667380422864376,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0,0,0,0.157635144106191,0,0.318909537314974,0,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0,0.683483523191411,0.206386867963223,0.185194527369712,0.753473828018764,0.136694227721025,0.228778173206523,2.37969801991397,2.23922323717853,1.24379976423981,0,0,0.406638934253697,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:114735446..114735466,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:114735446..114735466,+ | |||
|id=chr4:114735446..114735466,+ | |||
|ontology_enrichment_celltype=CL:0000049!3.85e-10!19;CL:0000763!3.98e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,8.70e-23,19;CL:0000557,1.83e-19,7;CL:0000988,3.57e-16,32;CL:0002032,3.57e-16,32;CL:0000037,3.57e-16,32;CL:0000837,3.57e-16,32;CL:0002320,5.38e-16,46;CL:0000134,5.38e-16,46;CL:0000219,2.16e-13,54;CL:0000034,7.49e-13,97;CL:0000763,4.98e-12,16;CL:0000723,1.10e-08,91;CL:0000048,1.10e-08,91;CL:0002092,1.31e-08,3;CL:0002540,1.31e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.04e-09!16;UBERON:0001474!1.39e-07!22;UBERON:0004765!1.39e-07!22;UBERON:0001434!1.39e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.20e-16,16;UBERON:0002384,5.38e-16,46;UBERON:0001474,9.42e-12,22;UBERON:0004765,9.42e-12,22;UBERON:0001434,9.42e-12,22;UBERON:0002204,7.07e-08,32 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,0,0.794327609607082,1.56719873483361,0,0,0,0,0,0,0,0,2.54012269383853,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,2.2497492932035,4.94433181283487,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0,0,0,0,1.83843757322004,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,3.83408398418945,2.99951365496704,2.66847476853436,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,1.40442637462647,2.57347907114715,3.9782889915383,0,0.469052119962192,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.667380422864376,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0.234690248288502,0,0,0,0.157635144106191,0,0.318909537314974,0,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0,0.683483523191411,0.206386867963223,0.185194527369712,0.753473828018764,0.136694227721025,0.228778173206523,2.37969801991397,2.23922323717853,1.24379976423981,0,0,0.406638934253697,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:114735446..114735466,+ | |||
}} |
Revision as of 03:28, 14 September 2013
Short description: | p@chr4:114735446..114735466, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:114735446..114735466, + |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 8.70e-23 | 19 |
granulocyte monocyte progenitor cell | 1.83e-19 | 7 |
hematopoietic cell | 3.57e-16 | 32 |
hematopoietic oligopotent progenitor cell | 3.57e-16 | 32 |
hematopoietic stem cell | 3.57e-16 | 32 |
hematopoietic multipotent progenitor cell | 3.57e-16 | 32 |
connective tissue cell | 5.38e-16 | 46 |
mesenchymal cell | 5.38e-16 | 46 |
motile cell | 2.16e-13 | 54 |
stem cell | 7.49e-13 | 97 |
myeloid cell | 4.98e-12 | 16 |
somatic stem cell | 1.10e-08 | 91 |
multi fate stem cell | 1.10e-08 | 91 |
bone marrow cell | 1.31e-08 | 3 |
mesenchymal stem cell of the bone marrow | 1.31e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.20e-16 | 16 |
connective tissue | 5.38e-16 | 46 |
bone element | 9.42e-12 | 22 |
skeletal element | 9.42e-12 | 22 |
skeletal system | 9.42e-12 | 22 |
musculoskeletal system | 7.07e-08 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.