FFCP PHASE1:Mm9::chr15:63640302..63640307,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=83492|HGNC=|MCL_coexpression_id=71|UniProt=Q99NB5|association_with_transcript=6bp_to_ENSMUST00000110125_5end|description=CAGE_peak_3_at_Gsdmc_5end|id=chr15:63640302..63640307,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!5.13e-15!5;UBERON:0001003!5.13e-15!5;UBERON:0002097!5.13e-15!5;UBERON:0002199!5.13e-15!5;UBERON:0007029!5.13e-15!5;UBERON:0007376!5.13e-15!5;UBERON:0002416!5.13e-15!5;UBERON:0007383!5.13e-15!5;UBERON:0003102!1.22e-11!23|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.60e-20,5;UBERON:0001003,2.60e-20,5;UBERON:0002097,2.60e-20,5;UBERON:0002199,2.60e-20,5;UBERON:0007029,2.60e-20,5;UBERON:0007376,2.60e-20,5;UBERON:0002416,2.60e-20,5;UBERON:0007383,2.60e-20,5;UBERON:0003102,4.74e-18,22;UBERON:0001723,1.55e-12,1;UBERON:0001033,1.55e-12,1;UBERON:0010056,1.55e-12,1;UBERON:0000996,7.11e-12,1;UBERON:0000161,1.09e-09,5;UBERON:0000165,6.68e-07,2;UBERON:0000166,6.68e-07,2;UBERON:0000930,6.68e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.696504333044333,4.93877127379064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,1.93757312035087,1.20625849856312,1.19372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756037385752609,0.627264888043406,0.87345025498471,1.07891477107857,0.743881101528023,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94749498699775,0,0,0,0,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.578719832943424,0,0.233931608445408,1.28922632428979,0.57386499620653,0,0|short_description=p3@Gsdmc}} | ||
|EntrezGene=83492 | |||
|HGNC= | |||
|MCL_coexpression_id=71 | |||
|UniProt=Q99NB5 | |||
|association_with_transcript=6bp_to_ENSMUST00000110125_5end | |||
|description=CAGE_peak_3_at_Gsdmc_5end | |||
|id=chr15:63640302..63640307,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!5.13e-15!5;UBERON:0001003!5.13e-15!5;UBERON:0002097!5.13e-15!5;UBERON:0002199!5.13e-15!5;UBERON:0007029!5.13e-15!5;UBERON:0007376!5.13e-15!5;UBERON:0002416!5.13e-15!5;UBERON:0007383!5.13e-15!5;UBERON:0003102!1.22e-11!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.60e-20,5;UBERON:0001003,2.60e-20,5;UBERON:0002097,2.60e-20,5;UBERON:0002199,2.60e-20,5;UBERON:0007029,2.60e-20,5;UBERON:0007376,2.60e-20,5;UBERON:0002416,2.60e-20,5;UBERON:0007383,2.60e-20,5;UBERON:0003102,4.74e-18,22;UBERON:0001723,1.55e-12,1;UBERON:0001033,1.55e-12,1;UBERON:0010056,1.55e-12,1;UBERON:0000996,7.11e-12,1;UBERON:0000161,1.09e-09,5;UBERON:0000165,6.68e-07,2;UBERON:0000166,6.68e-07,2;UBERON:0000930,6.68e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.696504333044333,4.93877127379064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,1.93757312035087,1.20625849856312,1.19372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756037385752609,0.627264888043406,0.87345025498471,1.07891477107857,0.743881101528023,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94749498699775,0,0,0,0,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0.578719832943424,0,0.233931608445408,1.28922632428979,0.57386499620653,0,0 | |||
|short_description=p3@Gsdmc | |||
}} |
Revision as of 10:42, 13 September 2013
Short description: | p3@Gsdmc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gsdmc_5end |
Coexpression cluster: | MCL_coexpression_mm9:71 |
Association with transcript: | 6bp_to_ENSMUST00000110125_5end |
EntrezGene: | Gsdmc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.60e-20 | 5 |
skin epidermis | 2.60e-20 | 5 |
skin of body | 2.60e-20 | 5 |
integument | 2.60e-20 | 5 |
surface | 2.60e-20 | 5 |
outer epithelium | 2.60e-20 | 5 |
integumental system | 2.60e-20 | 5 |
enveloping layer of ectoderm | 2.60e-20 | 5 |
surface structure | 4.74e-18 | 22 |
tongue | 1.55e-12 | 1 |
gustatory system | 1.55e-12 | 1 |
future tongue | 1.55e-12 | 1 |
vagina | 7.11e-12 | 1 |
orifice | 1.09e-09 | 5 |
mouth | 6.68e-07 | 2 |
oral opening | 6.68e-07 | 2 |
stomodeum | 6.68e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.