FFCP PHASE1:Mm9::chr3:68495294..68495333,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16159|HGNC=|MCL_coexpression_id=2964|UniProt=P43431,Q549G3|association_with_transcript=-12bp_to_ENSMUST00000107816,NM_008351,uc008plv.2_5end|description=CAGE_peak_1_at_Il12a_5end|id=chr3:68495294..68495333,+|ontology_enrichment_celltype=CL:0000553!3.06e-08!6;CL:0000556!3.06e-08!6;CL:0000049!3.71e-08!19;CL:0000988!5.58e-07!32;CL:0002032!5.58e-07!32;CL:0000037!5.58e-07!32;CL:0000566!5.58e-07!32;CL:0000837!5.58e-07!32|ontology_enrichment_celltype_v019_2=CL:0000049,6.59e-19,19;CL:0000988,1.05e-16,32;CL:0002032,1.05e-16,32;CL:0000037,1.05e-16,32;CL:0000837,1.05e-16,32;CL:0000553,3.70e-16,6;CL:0000556,3.70e-16,6;CL:0000763,1.70e-12,16;CL:0002320,1.37e-10,46;CL:0000134,1.37e-10,46;CL:0000050,1.51e-10,9;CL:0000219,1.57e-08,54;CL:0002027,2.58e-08,3;CL:0002006,2.58e-08,3;CL:0002024,2.58e-08,3;CL:0002031,1.40e-07,25;CL:0000839,4.34e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.94e-10!70;UBERON:0002193!1.60e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.04e-15,22;UBERON:0004765,2.04e-15,22;UBERON:0001434,2.04e-15,22;UBERON:0002371,1.70e-12,16;UBERON:0002204,1.66e-11,32;UBERON:0002384,1.37e-10,46;UBERON:0002193,6.47e-07,48;UBERON:0002405,6.47e-07,48|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,1.66554880907831,3.23960427823721,2.09868563438444,24.1328556499052,19.1960207048034,16.9755860719212,0.0850432901510698,21.3475545081903,25.0751797573378,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,9.2280433331755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,6.73238497482646,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,2.65383165584962,0,1.98757366614354,2.90925151881133,0,0,0,0,25.9998820177847,14.9975682748352,15.8837783841331,0,0,0,0.695297280769106,1.02286182932132,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,6.31991868581911,6.17634977075316,7.672414483681,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0.405720242777006,0.241177159752417,0.50925170356284,0.575392274901621,1.94562272130042,0.274561413188081,1.43768206527355,1.11642284300551,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0.315270288212382,0,0.478364305972461,1.14704320301017,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,1.53783792718067,0,0.185194527369712,0.941842285023455,3.69074414846768,5.26189798375002,28.0464409489861,29.9496107972628,32.7533937916484,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360586348559907,0.295379054349154,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05524755931193,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0.463735671240843|short_description=p1@Il12a}} | ||
|EntrezGene=16159 | |||
|HGNC= | |||
|MCL_coexpression_id=2964 | |||
|UniProt=P43431,Q549G3 | |||
|association_with_transcript=-12bp_to_ENSMUST00000107816,NM_008351,uc008plv.2_5end | |||
|description=CAGE_peak_1_at_Il12a_5end | |||
|id=chr3:68495294..68495333,+ | |||
|ontology_enrichment_celltype=CL:0000553!3.06e-08!6;CL:0000556!3.06e-08!6;CL:0000049!3.71e-08!19;CL:0000988!5.58e-07!32;CL:0002032!5.58e-07!32;CL:0000037!5.58e-07!32;CL:0000566!5.58e-07!32;CL:0000837!5.58e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,6.59e-19,19;CL:0000988,1.05e-16,32;CL:0002032,1.05e-16,32;CL:0000037,1.05e-16,32;CL:0000837,1.05e-16,32;CL:0000553,3.70e-16,6;CL:0000556,3.70e-16,6;CL:0000763,1.70e-12,16;CL:0002320,1.37e-10,46;CL:0000134,1.37e-10,46;CL:0000050,1.51e-10,9;CL:0000219,1.57e-08,54;CL:0002027,2.58e-08,3;CL:0002006,2.58e-08,3;CL:0002024,2.58e-08,3;CL:0002031,1.40e-07,25;CL:0000839,4.34e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.94e-10!70;UBERON:0002193!1.60e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.04e-15,22;UBERON:0004765,2.04e-15,22;UBERON:0001434,2.04e-15,22;UBERON:0002371,1.70e-12,16;UBERON:0002204,1.66e-11,32;UBERON:0002384,1.37e-10,46;UBERON:0002193,6.47e-07,48;UBERON:0002405,6.47e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,1.66554880907831,3.23960427823721,2.09868563438444,24.1328556499052,19.1960207048034,16.9755860719212,0.0850432901510698,21.3475545081903,25.0751797573378,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,9.2280433331755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,6.73238497482646,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,2.65383165584962,0,1.98757366614354,2.90925151881133,0,0,0,0,25.9998820177847,14.9975682748352,15.8837783841331,0,0,0,0.695297280769106,1.02286182932132,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,6.31991868581911,6.17634977075316,7.672414483681,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0.405720242777006,0.241177159752417,0.50925170356284,0.575392274901621,1.94562272130042,0.274561413188081,1.43768206527355,1.11642284300551,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0.315270288212382,0,0.478364305972461,1.14704320301017,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,1.53783792718067,0,0.185194527369712,0.941842285023455,3.69074414846768,5.26189798375002,28.0464409489861,29.9496107972628,32.7533937916484,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360586348559907,0.295379054349154,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05524755931193,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0.463735671240843 | |||
|short_description=p1@Il12a | |||
}} |
Revision as of 02:28, 14 September 2013
Short description: | p1@Il12a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Il12a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2964 |
Association with transcript: | -12bp_to_ENSMUST00000107816, NM_008351, uc008plv.2_5end |
EntrezGene: | Il12a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 6.59e-19 | 19 |
hematopoietic cell | 1.05e-16 | 32 |
hematopoietic oligopotent progenitor cell | 1.05e-16 | 32 |
hematopoietic stem cell | 1.05e-16 | 32 |
hematopoietic multipotent progenitor cell | 1.05e-16 | 32 |
megakaryocyte progenitor cell | 3.70e-16 | 6 |
megakaryocyte | 3.70e-16 | 6 |
myeloid cell | 1.70e-12 | 16 |
connective tissue cell | 1.37e-10 | 46 |
mesenchymal cell | 1.37e-10 | 46 |
megakaryocyte-erythroid progenitor cell | 1.51e-10 | 9 |
motile cell | 1.57e-08 | 54 |
CD9-positive, CD41-positive megakaryocyte cell | 2.58e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.58e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.58e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 1.40e-07 | 25 |
myeloid lineage restricted progenitor cell | 4.34e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.04e-15 | 22 |
skeletal element | 2.04e-15 | 22 |
skeletal system | 2.04e-15 | 22 |
bone marrow | 1.70e-12 | 16 |
musculoskeletal system | 1.66e-11 | 32 |
connective tissue | 1.37e-10 | 46 |
hemolymphoid system | 6.47e-07 | 48 |
immune system | 6.47e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.