FFCP PHASE1:Mm9::chr7:100228393..100228411,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=58238|HGNC=|MCL_coexpression_id=1830|UniProt=Q80VF6|association_with_transcript=4bp_to_ENSMUST00000051179,NM_021427,uc009iim.1_5end|description=CAGE_peak_3_at_Fam181b_5end|id=chr7:100228393..100228411,+|ontology_enrichment_celltype=CL:0000221!1.36e-22!44;CL:0000133!1.36e-22!44;CL:0002319!6.13e-22!43;CL:0000540!2.04e-16!33;CL:0000047!2.04e-16!33;CL:0000031!2.04e-16!33;CL:0000404!2.04e-16!33;CL:0000055!1.13e-15!50;CL:0000117!1.13e-13!23;CL:0000337!1.13e-13!23;CL:0000393!2.17e-11!39;CL:0000211!2.17e-11!39|ontology_enrichment_celltype_v019_2=CL:0000221,2.47e-32,44;CL:0000133,2.47e-32,44;CL:0002319,2.83e-31,43;CL:0000540,1.59e-23,33;CL:0000047,1.59e-23,33;CL:0000031,1.59e-23,33;CL:0000404,1.59e-23,33;CL:0000117,1.38e-21,23;CL:0000337,1.38e-21,23;CL:0000393,2.77e-18,39;CL:0000211,2.77e-18,39;CL:0002321,3.36e-15,70;CL:0000333,2.51e-08,10;CL:0000095,2.51e-08,10;CL:0000243,2.51e-08,10;CL:0000123,2.51e-08,10;CL:0000125,2.51e-08,10;CL:0000030,2.51e-08,10;CL:0000339,2.51e-08,10;CL:0002453,3.36e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.00e-35!75;UBERON:0001016!2.00e-35!75;UBERON:0001017!1.93e-34!73;UBERON:0005743!1.93e-34!73;UBERON:0004121!1.78e-31!102;UBERON:0000924!1.78e-31!102;UBERON:0006601!1.78e-31!102;UBERON:0001049!5.00e-23!52;UBERON:0005068!5.00e-23!52;UBERON:0006241!5.00e-23!52;UBERON:0007135!5.00e-23!52;UBERON:0002346!1.05e-21!71;UBERON:0003075!1.05e-21!71;UBERON:0007284!1.05e-21!71;UBERON:0000955!5.55e-21!50;UBERON:0006238!5.55e-21!50;UBERON:0002616!2.91e-20!49;UBERON:0000033!8.33e-20!63;UBERON:0003080!1.15e-15!40;UBERON:0002020!1.44e-15!34;UBERON:0002780!1.79e-15!39;UBERON:0001890!1.79e-15!39;UBERON:0006240!1.79e-15!39;UBERON:0003056!6.18e-14!49;UBERON:0002791!4.43e-12!29;UBERON:0003528!4.43e-12!29;UBERON:0001893!4.43e-12!29;UBERON:0000153!5.10e-11!94;UBERON:0007811!2.19e-10!86;UBERON:0000956!1.70e-08!21;UBERON:0001869!1.70e-08!21;UBERON:0000203!1.70e-08!21;UBERON:0003076!3.52e-08!12;UBERON:0003057!3.52e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.76e-48,75;UBERON:0001017,1.06e-46,73;UBERON:0004121,7.18e-37,95;UBERON:0000924,7.18e-37,95;UBERON:0006601,7.18e-37,95;UBERON:0000073,1.45e-32,54;UBERON:0001049,6.14e-31,52;UBERON:0005068,6.14e-31,52;UBERON:0006241,6.14e-31,52;UBERON:0007135,6.14e-31,52;UBERON:0000955,3.88e-25,47;UBERON:0006238,3.88e-25,47;UBERON:0002616,4.88e-24,46;UBERON:0002346,1.14e-23,64;UBERON:0003075,1.14e-23,64;UBERON:0007284,1.14e-23,64;UBERON:0002020,3.20e-23,34;UBERON:0010371,2.60e-21,73;UBERON:0002780,3.10e-21,39;UBERON:0001890,3.10e-21,39;UBERON:0006240,3.10e-21,39;UBERON:0003080,2.00e-20,40;UBERON:0003528,1.50e-17,29;UBERON:0002791,1.50e-17,29;UBERON:0001893,1.50e-17,29;UBERON:0010314,2.75e-16,92;UBERON:0003056,1.09e-14,49;UBERON:0000956,7.25e-13,21;UBERON:0001869,7.25e-13,21;UBERON:0000203,7.25e-13,21;UBERON:0003076,3.91e-11,12;UBERON:0003057,3.91e-11,12;UBERON:0002619,6.63e-10,17;UBERON:0011216,1.25e-09,194;UBERON:0004111,1.59e-08,122;UBERON:0002240,2.47e-08,6;UBERON:0005174,2.47e-08,6;UBERON:0001137,2.47e-08,6;UBERON:0000025,4.35e-08,114;UBERON:0001948,2.64e-07,5;UBERON:0002315,2.64e-07,5|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,5.27246838562732,1.74986909166855,1.67983705950435,10.062679505548,0,0,0,0,0.286533439938757,0,3.23706337375356,4.23192783417626,5.07065122804943,1.35537812827653,0.889294796111139,0,0,0,5.39280198933128,12.2949857702897,2.17748185847803,2.56511282830212,2.52389953621658,6.85562362569129,5.74258206474195,1.22490799214954,1.62937300731002,1.83843757322004,3.30347642998166,1.65993539510744,2.61131106535614,3.56092976871523,3.01909223887952,1.56274011167028,3.07101298901519,3.37657566019008,1.37518422999129,6.18720029494702,4.6982654663704,7.08317894136142,1.66597625333005,1.43585964202892,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,3.38024207464033,0,0,0,0,0,0,0.11418387971906,0,1.63286352971307,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.587943535678524,1.50799909595611,0,0,0,0.323533699894818,0.883366073841574,0,0,2.34224637609238,1.25668024088073,0,0.11981512450592,0,0.127070227073065,0.898743836428936,0.915001205637253,2.26177833803156,1.56441888173049,1.02286182932132,1.0389402227978,2.59586020908412,0.509196819251581,0,0,0.631325567659422,0.260240885925407,0.459804208866946,0.720248519221397,0.30140963567143,0.680364991513279,0.2562274405697,0.468508622798644,0,3.66465587985832,0.945530400839096,1.40760899331159,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0,0.536546802799238,1.16765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0.584799949701329,0.219550115291051,0.402619256281115,1.26173969138476,3.70456604565424,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0.387904974335251,0.350679099451593,0.189709611372772,0,0,0.123397163921801,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0.476087281772027,0.780534591431195,0.788175720530955,1.10732344824387,1.11618338060241,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0.551873492609465,3.53211297973142,3.6335622843583,0,0.757412781613119,0.315508219416257,0.780877488593277,2.15423397732799,2.62865677747807,1.55959071857676,0.566153061577665,2.02405350837447,4.09158201075837,1.58115111178609,5.14114106274891,0.567760340833074,0.35613120733451,0.325773918707152,0.824850614862677,0,0.728341908464944,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,1.36175842301515,0.720244376125241,2.58717367565509,1.07168517515796,2.30542303734956,1.96205699362278,1.97458824722545,0.608929898229199,1.87737366450968,0,0,0,0.484393280087717,0.241251699712623,0.358117032009409,0,0,3.8939313422207,0.341741761595705,0.619160603889667,0.370389054739423,0.565105371014073,0.410082683163076,0,0.339956859987711,0.419854356970974,0.276399947608848,0,1.10717597753397,0.203319467126849,0.648032044930808,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0.129614973291793,2.4853572523477,0,0.448549638131936,0.330916980914195,1.55560950675238,1.6790777052105,0.675824501963113,0.58678619322877,0.13020438484395,0.209718688851422,0.241584120826006,0,0.316011120628178,1.01362607645082,0.718976700153791,0.389762468933385,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,3.68260189205742,4.58316410751517,2.40594455281163,2.05524755931193,2.2661816921691,1.35004500046361,0,1.35942722695261,1.03552062350364,2.90604573235695,3.59122386060928,1.87806966329548,0.486213434136588,0.838452650511929,0.919217542250071,0.44449345560323,1.85431551515005,0.64183841918363,0.505394423527595,0,1.13175804831646,0.468207537349412,0.89635213366817,0.689225627467359,1.90517476513229,1.0429589335037,0.77163688185482,0.824171801606613,0.588795680537589,1.37147700954166,1.4198064492747,0,0.726732083161643,0.752875043322645,0.592302255241736,0.548783918618318,0,0.543216455383447,1.12228454331548,0.474540072496697,1.0835493061312,0.818462086339379,1.23949472948773,0.385813221962283,2.49810577937946,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.695603506861264|short_description=p3@Fam181b}} | ||
|EntrezGene=58238 | |||
|HGNC= | |||
|MCL_coexpression_id=1830 | |||
|UniProt=Q80VF6 | |||
|association_with_transcript=4bp_to_ENSMUST00000051179,NM_021427,uc009iim.1_5end | |||
|description=CAGE_peak_3_at_Fam181b_5end | |||
|id=chr7:100228393..100228411,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.36e-22!44;CL:0000133!1.36e-22!44;CL:0002319!6.13e-22!43;CL:0000540!2.04e-16!33;CL:0000047!2.04e-16!33;CL:0000031!2.04e-16!33;CL:0000404!2.04e-16!33;CL:0000055!1.13e-15!50;CL:0000117!1.13e-13!23;CL:0000337!1.13e-13!23;CL:0000393!2.17e-11!39;CL:0000211!2.17e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.47e-32,44;CL:0000133,2.47e-32,44;CL:0002319,2.83e-31,43;CL:0000540,1.59e-23,33;CL:0000047,1.59e-23,33;CL:0000031,1.59e-23,33;CL:0000404,1.59e-23,33;CL:0000117,1.38e-21,23;CL:0000337,1.38e-21,23;CL:0000393,2.77e-18,39;CL:0000211,2.77e-18,39;CL:0002321,3.36e-15,70;CL:0000333,2.51e-08,10;CL:0000095,2.51e-08,10;CL:0000243,2.51e-08,10;CL:0000123,2.51e-08,10;CL:0000125,2.51e-08,10;CL:0000030,2.51e-08,10;CL:0000339,2.51e-08,10;CL:0002453,3.36e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.00e-35!75;UBERON:0001016!2.00e-35!75;UBERON:0001017!1.93e-34!73;UBERON:0005743!1.93e-34!73;UBERON:0004121!1.78e-31!102;UBERON:0000924!1.78e-31!102;UBERON:0006601!1.78e-31!102;UBERON:0001049!5.00e-23!52;UBERON:0005068!5.00e-23!52;UBERON:0006241!5.00e-23!52;UBERON:0007135!5.00e-23!52;UBERON:0002346!1.05e-21!71;UBERON:0003075!1.05e-21!71;UBERON:0007284!1.05e-21!71;UBERON:0000955!5.55e-21!50;UBERON:0006238!5.55e-21!50;UBERON:0002616!2.91e-20!49;UBERON:0000033!8.33e-20!63;UBERON:0003080!1.15e-15!40;UBERON:0002020!1.44e-15!34;UBERON:0002780!1.79e-15!39;UBERON:0001890!1.79e-15!39;UBERON:0006240!1.79e-15!39;UBERON:0003056!6.18e-14!49;UBERON:0002791!4.43e-12!29;UBERON:0003528!4.43e-12!29;UBERON:0001893!4.43e-12!29;UBERON:0000153!5.10e-11!94;UBERON:0007811!2.19e-10!86;UBERON:0000956!1.70e-08!21;UBERON:0001869!1.70e-08!21;UBERON:0000203!1.70e-08!21;UBERON:0003076!3.52e-08!12;UBERON:0003057!3.52e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.76e-48,75;UBERON:0001017,1.06e-46,73;UBERON:0004121,7.18e-37,95;UBERON:0000924,7.18e-37,95;UBERON:0006601,7.18e-37,95;UBERON:0000073,1.45e-32,54;UBERON:0001049,6.14e-31,52;UBERON:0005068,6.14e-31,52;UBERON:0006241,6.14e-31,52;UBERON:0007135,6.14e-31,52;UBERON:0000955,3.88e-25,47;UBERON:0006238,3.88e-25,47;UBERON:0002616,4.88e-24,46;UBERON:0002346,1.14e-23,64;UBERON:0003075,1.14e-23,64;UBERON:0007284,1.14e-23,64;UBERON:0002020,3.20e-23,34;UBERON:0010371,2.60e-21,73;UBERON:0002780,3.10e-21,39;UBERON:0001890,3.10e-21,39;UBERON:0006240,3.10e-21,39;UBERON:0003080,2.00e-20,40;UBERON:0003528,1.50e-17,29;UBERON:0002791,1.50e-17,29;UBERON:0001893,1.50e-17,29;UBERON:0010314,2.75e-16,92;UBERON:0003056,1.09e-14,49;UBERON:0000956,7.25e-13,21;UBERON:0001869,7.25e-13,21;UBERON:0000203,7.25e-13,21;UBERON:0003076,3.91e-11,12;UBERON:0003057,3.91e-11,12;UBERON:0002619,6.63e-10,17;UBERON:0011216,1.25e-09,194;UBERON:0004111,1.59e-08,122;UBERON:0002240,2.47e-08,6;UBERON:0005174,2.47e-08,6;UBERON:0001137,2.47e-08,6;UBERON:0000025,4.35e-08,114;UBERON:0001948,2.64e-07,5;UBERON:0002315,2.64e-07,5 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,5.27246838562732,1.74986909166855,1.67983705950435,10.062679505548,0,0,0,0,0.286533439938757,0,3.23706337375356,4.23192783417626,5.07065122804943,1.35537812827653,0.889294796111139,0,0,0,5.39280198933128,12.2949857702897,2.17748185847803,2.56511282830212,2.52389953621658,6.85562362569129,5.74258206474195,1.22490799214954,1.62937300731002,1.83843757322004,3.30347642998166,1.65993539510744,2.61131106535614,3.56092976871523,3.01909223887952,1.56274011167028,3.07101298901519,3.37657566019008,1.37518422999129,6.18720029494702,4.6982654663704,7.08317894136142,1.66597625333005,1.43585964202892,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,3.38024207464033,0,0,0,0,0,0,0.11418387971906,0,1.63286352971307,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.587943535678524,1.50799909595611,0,0,0,0.323533699894818,0.883366073841574,0,0,2.34224637609238,1.25668024088073,0,0.11981512450592,0,0.127070227073065,0.898743836428936,0.915001205637253,2.26177833803156,1.56441888173049,1.02286182932132,1.0389402227978,2.59586020908412,0.509196819251581,0,0,0.631325567659422,0.260240885925407,0.459804208866946,0.720248519221397,0.30140963567143,0.680364991513279,0.2562274405697,0.468508622798644,0,3.66465587985832,0.945530400839096,1.40760899331159,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0,0.536546802799238,1.16765342367169,0.493679549740441,0.32833492815819,0.324275238183423,0.584799949701329,0.219550115291051,0.402619256281115,1.26173969138476,3.70456604565424,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0.387904974335251,0.350679099451593,0.189709611372772,0,0,0.123397163921801,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0.704070744865506,0.670025029767263,0.476087281772027,0.780534591431195,0.788175720530955,1.10732344824387,1.11618338060241,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0.551873492609465,3.53211297973142,3.6335622843583,0,0.757412781613119,0.315508219416257,0.780877488593277,2.15423397732799,2.62865677747807,1.55959071857676,0.566153061577665,2.02405350837447,4.09158201075837,1.58115111178609,5.14114106274891,0.567760340833074,0.35613120733451,0.325773918707152,0.824850614862677,0,0.728341908464944,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,1.36175842301515,0.720244376125241,2.58717367565509,1.07168517515796,2.30542303734956,1.96205699362278,1.97458824722545,0.608929898229199,1.87737366450968,0,0,0,0.484393280087717,0.241251699712623,0.358117032009409,0,0,3.8939313422207,0.341741761595705,0.619160603889667,0.370389054739423,0.565105371014073,0.410082683163076,0,0.339956859987711,0.419854356970974,0.276399947608848,0,1.10717597753397,0.203319467126849,0.648032044930808,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0.129614973291793,2.4853572523477,0,0.448549638131936,0.330916980914195,1.55560950675238,1.6790777052105,0.675824501963113,0.58678619322877,0.13020438484395,0.209718688851422,0.241584120826006,0,0.316011120628178,1.01362607645082,0.718976700153791,0.389762468933385,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,3.68260189205742,4.58316410751517,2.40594455281163,2.05524755931193,2.2661816921691,1.35004500046361,0,1.35942722695261,1.03552062350364,2.90604573235695,3.59122386060928,1.87806966329548,0.486213434136588,0.838452650511929,0.919217542250071,0.44449345560323,1.85431551515005,0.64183841918363,0.505394423527595,0,1.13175804831646,0.468207537349412,0.89635213366817,0.689225627467359,1.90517476513229,1.0429589335037,0.77163688185482,0.824171801606613,0.588795680537589,1.37147700954166,1.4198064492747,0,0.726732083161643,0.752875043322645,0.592302255241736,0.548783918618318,0,0.543216455383447,1.12228454331548,0.474540072496697,1.0835493061312,0.818462086339379,1.23949472948773,0.385813221962283,2.49810577937946,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.695603506861264 | |||
|short_description=p3@Fam181b | |||
}} |
Revision as of 11:07, 14 September 2013
Short description: | p3@Fam181b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam181b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1830 |
Association with transcript: | 4bp_to_ENSMUST00000051179, NM_021427, uc009iim.1_5end |
EntrezGene: | Fam181b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.47e-32 | 44 |
neurectodermal cell | 2.47e-32 | 44 |
neural cell | 2.83e-31 | 43 |
neuron | 1.59e-23 | 33 |
neuronal stem cell | 1.59e-23 | 33 |
neuroblast | 1.59e-23 | 33 |
electrically signaling cell | 1.59e-23 | 33 |
CNS neuron (sensu Vertebrata) | 1.38e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-21 | 23 |
electrically responsive cell | 2.77e-18 | 39 |
electrically active cell | 2.77e-18 | 39 |
embryonic cell | 3.36e-15 | 70 |
migratory neural crest cell | 2.51e-08 | 10 |
neuron associated cell | 2.51e-08 | 10 |
glial cell (sensu Vertebrata) | 2.51e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.51e-08 | 10 |
glial cell | 2.51e-08 | 10 |
glioblast | 2.51e-08 | 10 |
glioblast (sensu Vertebrata) | 2.51e-08 | 10 |
oligodendrocyte precursor cell | 3.36e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.