FFCP PHASE1:Mm9::chr7:19905359..19905377,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:19905359..19905377,-|id=chr7:19905359..19905377,-|ontology_enrichment_celltype=CL:0000988!1.20e-07!32;CL:0002032!1.20e-07!32;CL:0000037!1.20e-07!32;CL:0000566!1.20e-07!32;CL:0000837!1.20e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,3.95e-13,32;CL:0002032,3.95e-13,32;CL:0000037,3.95e-13,32;CL:0000837,3.95e-13,32;CL:0002031,4.99e-12,25;CL:0000034,7.79e-12,97;CL:0002320,3.36e-10,46;CL:0000134,3.36e-10,46;CL:0000553,9.54e-10,6;CL:0000556,9.54e-10,6;CL:0000838,1.62e-09,12;CL:0000723,8.71e-09,91;CL:0000048,8.71e-09,91;CL:0000542,9.62e-09,13;CL:0000051,9.62e-09,13;CL:0000219,2.50e-08,54;CL:0000197,1.31e-07,2;CL:0002491,1.31e-07,2;CL:0000098,1.31e-07,2;CL:0000084,2.79e-07,11;CL:0000827,2.79e-07,11;CL:0000624,8.70e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.19e-11,3;DOID:4045,2.19e-11,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.64e-11,32;UBERON:0007524,9.94e-11,11;UBERON:0003077,9.94e-11,11;UBERON:0007285,9.94e-11,11;UBERON:0002384,3.36e-10,46;UBERON:0004766,1.31e-07,2;UBERON:0008193,1.31e-07,2;UBERON:0005913,1.31e-07,2;UBERON:0011158,1.31e-07,2;UBERON:0005744,1.31e-07,2;UBERON:0003457,1.31e-07,2;UBERON:0008001,1.31e-07,2;UBERON:0007497,1.31e-07,2;UBERON:0009955,1.31e-07,2;UBERON:0003067,1.31e-07,2;UBERON:0002546,1.31e-07,2;UBERON:0007914,1.31e-07,2;UBERON:0005253,1.31e-07,2;UBERON:0002227,1.31e-07,2;UBERON:0001846,1.31e-07,2;UBERON:0004339,1.31e-07,2;UBERON:0002105,1.31e-07,2;UBERON:0001678,1.31e-07,2;UBERON:0003128,1.31e-07,2;UBERON:0001694,1.31e-07,2;UBERON:0004681,1.31e-07,2;UBERON:0001839,1.31e-07,2;UBERON:0001690,1.31e-07,2;UBERON:0001844,1.31e-07,2;UBERON:0001849,1.31e-07,2;UBERON:0002499,1.31e-07,2;UBERON:0001855,1.31e-07,2;UBERON:0011137,1.31e-07,2;UBERON:0001703,1.31e-07,2;UBERON:0010323,1.31e-07,2;UBERON:0003129,1.31e-07,2;UBERON:0003069,1.31e-07,2;UBERON:0003051,1.31e-07,2;UBERON:0004637,1.31e-07,2;UBERON:0004761,1.31e-07,2;UBERON:0010113,1.31e-07,2;UBERON:0009123,1.31e-07,2;UBERON:0010351,1.31e-07,2;UBERON:0009617,1.31e-07,2;UBERON:0005641,1.31e-07,2;UBERON:0010349,1.31e-07,2;UBERON:0001474,6.61e-07,22;UBERON:0004765,6.61e-07,22;UBERON:0001434,6.61e-07,22|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,1.80772652818207,0,0.234064526321993,0,0,1.19840510951844,1.04904482902797,0,1.01237633694913,0,5.99378114180652,3.15363197293199,6.79023442876848,0.17008658030214,0.397163804803541,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.612508068787107,1.67412652294763,3.906676722619,3.66466620781659,86.4700287405591,5.46436387966757,1.94204141212461,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,3.52343472721246,1.45072428402269,0.336093799142464,0,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.302904773332736,0.377857800533928,9.27566363845369,0,0,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0.988779870937496,0,0,0.161766849947409,0,0,0,0,0,0,0.718890747035522,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0,0.272145996605311,0.12811372028485,0,0,1.94011193639558,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0.398068533636986,0,1.28673953557358,0.284163499395593,0.828503090142008,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.948339504765408,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,2.03974115992626,4.05859211738608,1.24379976423981,0,0.316335993581135,0,0,0,0.436725127492355,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.900642406448441,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:19905359..19905377,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:19905359..19905377,- | |||
|id=chr7:19905359..19905377,- | |||
|ontology_enrichment_celltype=CL:0000988!1.20e-07!32;CL:0002032!1.20e-07!32;CL:0000037!1.20e-07!32;CL:0000566!1.20e-07!32;CL:0000837!1.20e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.95e-13,32;CL:0002032,3.95e-13,32;CL:0000037,3.95e-13,32;CL:0000837,3.95e-13,32;CL:0002031,4.99e-12,25;CL:0000034,7.79e-12,97;CL:0002320,3.36e-10,46;CL:0000134,3.36e-10,46;CL:0000553,9.54e-10,6;CL:0000556,9.54e-10,6;CL:0000838,1.62e-09,12;CL:0000723,8.71e-09,91;CL:0000048,8.71e-09,91;CL:0000542,9.62e-09,13;CL:0000051,9.62e-09,13;CL:0000219,2.50e-08,54;CL:0000197,1.31e-07,2;CL:0002491,1.31e-07,2;CL:0000098,1.31e-07,2;CL:0000084,2.79e-07,11;CL:0000827,2.79e-07,11;CL:0000624,8.70e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.19e-11,3;DOID:4045,2.19e-11,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.64e-11,32;UBERON:0007524,9.94e-11,11;UBERON:0003077,9.94e-11,11;UBERON:0007285,9.94e-11,11;UBERON:0002384,3.36e-10,46;UBERON:0004766,1.31e-07,2;UBERON:0008193,1.31e-07,2;UBERON:0005913,1.31e-07,2;UBERON:0011158,1.31e-07,2;UBERON:0005744,1.31e-07,2;UBERON:0003457,1.31e-07,2;UBERON:0008001,1.31e-07,2;UBERON:0007497,1.31e-07,2;UBERON:0009955,1.31e-07,2;UBERON:0003067,1.31e-07,2;UBERON:0002546,1.31e-07,2;UBERON:0007914,1.31e-07,2;UBERON:0005253,1.31e-07,2;UBERON:0002227,1.31e-07,2;UBERON:0001846,1.31e-07,2;UBERON:0004339,1.31e-07,2;UBERON:0002105,1.31e-07,2;UBERON:0001678,1.31e-07,2;UBERON:0003128,1.31e-07,2;UBERON:0001694,1.31e-07,2;UBERON:0004681,1.31e-07,2;UBERON:0001839,1.31e-07,2;UBERON:0001690,1.31e-07,2;UBERON:0001844,1.31e-07,2;UBERON:0001849,1.31e-07,2;UBERON:0002499,1.31e-07,2;UBERON:0001855,1.31e-07,2;UBERON:0011137,1.31e-07,2;UBERON:0001703,1.31e-07,2;UBERON:0010323,1.31e-07,2;UBERON:0003129,1.31e-07,2;UBERON:0003069,1.31e-07,2;UBERON:0003051,1.31e-07,2;UBERON:0004637,1.31e-07,2;UBERON:0004761,1.31e-07,2;UBERON:0010113,1.31e-07,2;UBERON:0009123,1.31e-07,2;UBERON:0010351,1.31e-07,2;UBERON:0009617,1.31e-07,2;UBERON:0005641,1.31e-07,2;UBERON:0010349,1.31e-07,2;UBERON:0001474,6.61e-07,22;UBERON:0004765,6.61e-07,22;UBERON:0001434,6.61e-07,22 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,1.80772652818207,0,0.234064526321993,0,0,1.19840510951844,1.04904482902797,0,1.01237633694913,0,5.99378114180652,3.15363197293199,6.79023442876848,0.17008658030214,0.397163804803541,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0.612508068787107,1.67412652294763,3.906676722619,3.66466620781659,86.4700287405591,5.46436387966757,1.94204141212461,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,3.52343472721246,1.45072428402269,0.336093799142464,0,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.302904773332736,0.377857800533928,9.27566363845369,0,0,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0.988779870937496,0,0,0.161766849947409,0,0,0,0,0,0,0.718890747035522,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0,0.272145996605311,0.12811372028485,0,0,1.94011193639558,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0.398068533636986,0,1.28673953557358,0.284163499395593,0.828503090142008,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.948339504765408,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,2.03974115992626,4.05859211738608,1.24379976423981,0,0.316335993581135,0,0,0,0.436725127492355,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.900642406448441,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:19905359..19905377,- | |||
}} |
Revision as of 12:41, 14 September 2013
Short description: | p@chr7:19905359..19905377, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:19905359..19905377, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.95e-13 | 32 |
hematopoietic oligopotent progenitor cell | 3.95e-13 | 32 |
hematopoietic stem cell | 3.95e-13 | 32 |
hematopoietic multipotent progenitor cell | 3.95e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 4.99e-12 | 25 |
stem cell | 7.79e-12 | 97 |
connective tissue cell | 3.36e-10 | 46 |
mesenchymal cell | 3.36e-10 | 46 |
megakaryocyte progenitor cell | 9.54e-10 | 6 |
megakaryocyte | 9.54e-10 | 6 |
lymphoid lineage restricted progenitor cell | 1.62e-09 | 12 |
somatic stem cell | 8.71e-09 | 91 |
multi fate stem cell | 8.71e-09 | 91 |
lymphocyte | 9.62e-09 | 13 |
common lymphoid progenitor | 9.62e-09 | 13 |
motile cell | 2.50e-08 | 54 |
receptor cell | 1.31e-07 | 2 |
auditory epithelial cell | 1.31e-07 | 2 |
sensory epithelial cell | 1.31e-07 | 2 |
T cell | 2.79e-07 | 11 |
pro-T cell | 2.79e-07 | 11 |
CD4-positive, alpha-beta T cell | 8.70e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.19e-11 | 3 |
muscle cancer | 2.19e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.