FFCP PHASE1:Mm9::chr7:25784031..25784038,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=313|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:25784031..25784038,-|id=chr7:25784031..25784038,-|ontology_enrichment_celltype=CL:0000117!6.08e-21!23;CL:0000337!6.08e-21!23;CL:0000540!4.57e-13!33;CL:0000047!4.57e-13!33;CL:0000031!4.57e-13!33;CL:0000404!4.57e-13!33;CL:0000393!2.59e-10!39;CL:0000211!2.59e-10!39;CL:0002319!5.88e-10!43;CL:0000221!1.28e-09!44;CL:0000133!1.28e-09!44;CL:0000055!6.93e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.11e-17,23;CL:0000337,2.11e-17,23;CL:0002614,3.53e-16,3;CL:0000540,8.61e-12,33;CL:0000047,8.61e-12,33;CL:0000031,8.61e-12,33;CL:0000404,8.61e-12,33;CL:0002611,4.88e-11,2;CL:0000393,8.43e-10,39;CL:0000211,8.43e-10,39;CL:0002319,8.84e-09,43;CL:0000221,1.49e-08,44;CL:0000133,1.49e-08,44;CL:0002610,2.42e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.37e-33!52;UBERON:0005068!1.37e-33!52;UBERON:0006241!1.37e-33!52;UBERON:0007135!1.37e-33!52;UBERON:0000073!2.32e-32!75;UBERON:0001016!2.32e-32!75;UBERON:0001017!6.67e-32!73;UBERON:0005743!6.67e-32!73;UBERON:0002020!1.65e-29!34;UBERON:0000955!9.07e-29!50;UBERON:0006238!9.07e-29!50;UBERON:0002346!4.73e-28!71;UBERON:0003075!4.73e-28!71;UBERON:0007284!4.73e-28!71;UBERON:0002616!2.42e-27!49;UBERON:0000033!3.54e-27!63;UBERON:0004121!5.24e-26!102;UBERON:0000924!5.24e-26!102;UBERON:0006601!5.24e-26!102;UBERON:0003056!2.89e-22!49;UBERON:0002791!4.62e-22!29;UBERON:0003528!4.62e-22!29;UBERON:0001893!4.62e-22!29;UBERON:0003080!2.11e-21!40;UBERON:0002780!4.00e-20!39;UBERON:0001890!4.00e-20!39;UBERON:0006240!4.00e-20!39;UBERON:0000956!7.58e-18!21;UBERON:0001869!7.58e-18!21;UBERON:0000203!7.58e-18!21;UBERON:0007811!2.58e-17!86;UBERON:0002619!3.40e-15!17;UBERON:0000153!4.98e-15!94;UBERON:0002021!3.13e-14!10;UBERON:0000411!3.13e-14!10;UBERON:0001950!3.13e-14!10;UBERON:0003076!6.34e-13!12;UBERON:0003057!6.34e-13!12;UBERON:0002298!6.44e-11!6;UBERON:0002240!1.21e-10!6;UBERON:0005174!1.21e-10!6;UBERON:0001137!1.21e-10!6;UBERON:0000025!3.40e-10!114;UBERON:0001948!3.87e-09!5;UBERON:0002315!3.87e-09!5;UBERON:0004111!6.09e-09!122;UBERON:0002950!5.42e-08!4;UBERON:0001891!5.42e-08!4;UBERON:0009616!5.42e-08!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.55e-23,54;UBERON:0002020,1.61e-20,34;UBERON:0001017,1.01e-18,73;UBERON:0002021,1.01e-18,10;UBERON:0000411,1.01e-18,10;UBERON:0001950,1.01e-18,10;UBERON:0001016,3.61e-18,75;UBERON:0001049,1.03e-17,52;UBERON:0005068,1.03e-17,52;UBERON:0006241,1.03e-17,52;UBERON:0007135,1.03e-17,52;UBERON:0002038,3.53e-16,3;UBERON:0009663,3.53e-16,3;UBERON:0009661,3.53e-16,3;UBERON:0000125,3.53e-16,3;UBERON:0002308,3.53e-16,3;UBERON:0002346,4.93e-14,64;UBERON:0003075,4.93e-14,64;UBERON:0007284,4.93e-14,64;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0003528,1.37e-13,29;UBERON:0002791,1.37e-13,29;UBERON:0001893,1.37e-13,29;UBERON:0002950,2.78e-12,4;UBERON:0001891,2.78e-12,4;UBERON:0009616,2.78e-12,4;UBERON:0010286,2.78e-12,4;UBERON:0002616,3.26e-12,46;UBERON:0002780,3.92e-12,39;UBERON:0001890,3.92e-12,39;UBERON:0006240,3.92e-12,39;UBERON:0010371,4.62e-12,73;UBERON:0000955,6.38e-12,47;UBERON:0006238,6.38e-12,47;UBERON:0003080,8.52e-12,40;UBERON:0002256,4.88e-11,2;UBERON:0002619,7.37e-11,17;UBERON:0001948,7.14e-10,5;UBERON:0002315,7.14e-10,5;UBERON:0003056,2.23e-09,49;UBERON:0010314,3.72e-09,92;UBERON:0000956,1.04e-08,21;UBERON:0001869,1.04e-08,21;UBERON:0000203,1.04e-08,21;UBERON:0004684,2.42e-08,3;UBERON:0002275,2.42e-08,3;UBERON:0002240,2.60e-08,6;UBERON:0005174,2.60e-08,6;UBERON:0001137,2.60e-08,6;UBERON:0003076,5.17e-07,12;UBERON:0003057,5.17e-07,12;UBERON:0000025,5.48e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,1.71390590642282,1.10434270475807,0.122490799214954,0,0.919218786610021,0,2.93680877595932,2.30409799884365,0,0.548925861614458,0,3.90856198601933,1.12552522006336,1.22238598221448,2.06240009831567,0.711858403995515,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.748953197024114,0.457500602818626,0,0.869121600961382,0.511430914660661,1.45451631191692,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,1.12385412991454,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,1.71868654031819,2.40594455281163,2.05524755931193,1.5107877947794,1.35004500046361,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.347652977834566,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:25784031..25784038,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=313 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:25784031..25784038,- | |||
|id=chr7:25784031..25784038,- | |||
|ontology_enrichment_celltype=CL:0000117!6.08e-21!23;CL:0000337!6.08e-21!23;CL:0000540!4.57e-13!33;CL:0000047!4.57e-13!33;CL:0000031!4.57e-13!33;CL:0000404!4.57e-13!33;CL:0000393!2.59e-10!39;CL:0000211!2.59e-10!39;CL:0002319!5.88e-10!43;CL:0000221!1.28e-09!44;CL:0000133!1.28e-09!44;CL:0000055!6.93e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.11e-17,23;CL:0000337,2.11e-17,23;CL:0002614,3.53e-16,3;CL:0000540,8.61e-12,33;CL:0000047,8.61e-12,33;CL:0000031,8.61e-12,33;CL:0000404,8.61e-12,33;CL:0002611,4.88e-11,2;CL:0000393,8.43e-10,39;CL:0000211,8.43e-10,39;CL:0002319,8.84e-09,43;CL:0000221,1.49e-08,44;CL:0000133,1.49e-08,44;CL:0002610,2.42e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.37e-33!52;UBERON:0005068!1.37e-33!52;UBERON:0006241!1.37e-33!52;UBERON:0007135!1.37e-33!52;UBERON:0000073!2.32e-32!75;UBERON:0001016!2.32e-32!75;UBERON:0001017!6.67e-32!73;UBERON:0005743!6.67e-32!73;UBERON:0002020!1.65e-29!34;UBERON:0000955!9.07e-29!50;UBERON:0006238!9.07e-29!50;UBERON:0002346!4.73e-28!71;UBERON:0003075!4.73e-28!71;UBERON:0007284!4.73e-28!71;UBERON:0002616!2.42e-27!49;UBERON:0000033!3.54e-27!63;UBERON:0004121!5.24e-26!102;UBERON:0000924!5.24e-26!102;UBERON:0006601!5.24e-26!102;UBERON:0003056!2.89e-22!49;UBERON:0002791!4.62e-22!29;UBERON:0003528!4.62e-22!29;UBERON:0001893!4.62e-22!29;UBERON:0003080!2.11e-21!40;UBERON:0002780!4.00e-20!39;UBERON:0001890!4.00e-20!39;UBERON:0006240!4.00e-20!39;UBERON:0000956!7.58e-18!21;UBERON:0001869!7.58e-18!21;UBERON:0000203!7.58e-18!21;UBERON:0007811!2.58e-17!86;UBERON:0002619!3.40e-15!17;UBERON:0000153!4.98e-15!94;UBERON:0002021!3.13e-14!10;UBERON:0000411!3.13e-14!10;UBERON:0001950!3.13e-14!10;UBERON:0003076!6.34e-13!12;UBERON:0003057!6.34e-13!12;UBERON:0002298!6.44e-11!6;UBERON:0002240!1.21e-10!6;UBERON:0005174!1.21e-10!6;UBERON:0001137!1.21e-10!6;UBERON:0000025!3.40e-10!114;UBERON:0001948!3.87e-09!5;UBERON:0002315!3.87e-09!5;UBERON:0004111!6.09e-09!122;UBERON:0002950!5.42e-08!4;UBERON:0001891!5.42e-08!4;UBERON:0009616!5.42e-08!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.55e-23,54;UBERON:0002020,1.61e-20,34;UBERON:0001017,1.01e-18,73;UBERON:0002021,1.01e-18,10;UBERON:0000411,1.01e-18,10;UBERON:0001950,1.01e-18,10;UBERON:0001016,3.61e-18,75;UBERON:0001049,1.03e-17,52;UBERON:0005068,1.03e-17,52;UBERON:0006241,1.03e-17,52;UBERON:0007135,1.03e-17,52;UBERON:0002038,3.53e-16,3;UBERON:0009663,3.53e-16,3;UBERON:0009661,3.53e-16,3;UBERON:0000125,3.53e-16,3;UBERON:0002308,3.53e-16,3;UBERON:0002346,4.93e-14,64;UBERON:0003075,4.93e-14,64;UBERON:0007284,4.93e-14,64;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0003528,1.37e-13,29;UBERON:0002791,1.37e-13,29;UBERON:0001893,1.37e-13,29;UBERON:0002950,2.78e-12,4;UBERON:0001891,2.78e-12,4;UBERON:0009616,2.78e-12,4;UBERON:0010286,2.78e-12,4;UBERON:0002616,3.26e-12,46;UBERON:0002780,3.92e-12,39;UBERON:0001890,3.92e-12,39;UBERON:0006240,3.92e-12,39;UBERON:0010371,4.62e-12,73;UBERON:0000955,6.38e-12,47;UBERON:0006238,6.38e-12,47;UBERON:0003080,8.52e-12,40;UBERON:0002256,4.88e-11,2;UBERON:0002619,7.37e-11,17;UBERON:0001948,7.14e-10,5;UBERON:0002315,7.14e-10,5;UBERON:0003056,2.23e-09,49;UBERON:0010314,3.72e-09,92;UBERON:0000956,1.04e-08,21;UBERON:0001869,1.04e-08,21;UBERON:0000203,1.04e-08,21;UBERON:0004684,2.42e-08,3;UBERON:0002275,2.42e-08,3;UBERON:0002240,2.60e-08,6;UBERON:0005174,2.60e-08,6;UBERON:0001137,2.60e-08,6;UBERON:0003076,5.17e-07,12;UBERON:0003057,5.17e-07,12;UBERON:0000025,5.48e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,1.71390590642282,1.10434270475807,0.122490799214954,0,0.919218786610021,0,2.93680877595932,2.30409799884365,0,0.548925861614458,0,3.90856198601933,1.12552522006336,1.22238598221448,2.06240009831567,0.711858403995515,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.748953197024114,0.457500602818626,0,0.869121600961382,0.511430914660661,1.45451631191692,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,1.12385412991454,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,1.71868654031819,2.40594455281163,2.05524755931193,1.5107877947794,1.35004500046361,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.347652977834566,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:25784031..25784038,- | |||
}} |
Revision as of 12:51, 14 September 2013
Short description: | p@chr7:25784031..25784038, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25784031..25784038, - |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.11e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.11e-17 | 23 |
neuron of the substantia nigra | 3.53e-16 | 3 |
neuron | 8.61e-12 | 33 |
neuronal stem cell | 8.61e-12 | 33 |
neuroblast | 8.61e-12 | 33 |
electrically signaling cell | 8.61e-12 | 33 |
neuron of the dorsal spinal cord | 4.88e-11 | 2 |
electrically responsive cell | 8.43e-10 | 39 |
electrically active cell | 8.43e-10 | 39 |
neural cell | 8.84e-09 | 43 |
ectodermal cell | 1.49e-08 | 44 |
neurectodermal cell | 1.49e-08 | 44 |
raphe nuclei neuron | 2.42e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.