FFCP PHASE1:Mm9::chr14:121739423..121739435,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=218|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:121739423..121739435,-|id=chr14:121739423..121739435,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.10e-12,6;CL:0000677,1.10e-12,6;CL:0000584,1.10e-12,6;CL:0000075,5.82e-11,7;CL:0002563,1.18e-08,9;CL:0002251,1.18e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.72e-17,2;UBERON:0002298,2.72e-17,2;UBERON:0005290,2.72e-17,2;UBERON:0010096,2.72e-17,2;UBERON:0002259,2.52e-09,1;UBERON:0002314,2.52e-09,1;UBERON:0004061,2.52e-09,1;UBERON:0006777,2.52e-09,1;UBERON:0005882,2.52e-09,1;UBERON:0002950,6.98e-09,4;UBERON:0001891,6.98e-09,4;UBERON:0009616,6.98e-09,4;UBERON:0010286,6.98e-09,4;UBERON:0003350,1.18e-08,9;UBERON:0004808,1.18e-08,9;UBERON:0001277,1.18e-08,9;UBERON:0000485,3.54e-07,11;UBERON:0003076,8.89e-07,12;UBERON:0003057,8.89e-07,12|phase1_expression=0,0,2.27499619694768,0.30246421130683,3.00537437967808,1.00727563147134,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46081959976873,0,0,0,1.3959149950069,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0,0,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.64769703345305,0,0,0,0,0.41557608911912,0.648965052271031,0,0.497627882440372,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0.729619285912702,1.02339991197733,1.3173006917463,1.47627060636409,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.478364305972461,0.327726629431476,0,0.433947175744535,0,0,0,0,2.72936002979246,1.99259867206745,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,7.23158677840988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0.524296722128554,0.241584120826006,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.377252682772152,0,0,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p@chr14:121739423..121739435,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:121739423..121739435,- | |||
|id=chr14:121739423..121739435,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.10e-12,6;CL:0000677,1.10e-12,6;CL:0000584,1.10e-12,6;CL:0000075,5.82e-11,7;CL:0002563,1.18e-08,9;CL:0002251,1.18e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.72e-17,2;UBERON:0002298,2.72e-17,2;UBERON:0005290,2.72e-17,2;UBERON:0010096,2.72e-17,2;UBERON:0002259,2.52e-09,1;UBERON:0002314,2.52e-09,1;UBERON:0004061,2.52e-09,1;UBERON:0006777,2.52e-09,1;UBERON:0005882,2.52e-09,1;UBERON:0002950,6.98e-09,4;UBERON:0001891,6.98e-09,4;UBERON:0009616,6.98e-09,4;UBERON:0010286,6.98e-09,4;UBERON:0003350,1.18e-08,9;UBERON:0004808,1.18e-08,9;UBERON:0001277,1.18e-08,9;UBERON:0000485,3.54e-07,11;UBERON:0003076,8.89e-07,12;UBERON:0003057,8.89e-07,12 | |||
|phase1_expression=0,0,2.27499619694768,0.30246421130683,3.00537437967808,1.00727563147134,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46081959976873,0,0,0,1.3959149950069,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0,0,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.64769703345305,0,0,0,0,0.41557608911912,0.648965052271031,0,0.497627882440372,0,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0.729619285912702,1.02339991197733,1.3173006917463,1.47627060636409,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.478364305972461,0.327726629431476,0,0.433947175744535,0,0,0,0,2.72936002979246,1.99259867206745,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,7.23158677840988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0,0,0.524296722128554,0.241584120826006,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.377252682772152,0,0,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr14:121739423..121739435,- | |||
}} |
Revision as of 01:34, 13 September 2013
Short description: | p@chr14:121739423..121739435, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:121739423..121739435, - |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.10e-12 | 6 |
gut absorptive cell | 1.10e-12 | 6 |
enterocyte | 1.10e-12 | 6 |
columnar/cuboidal epithelial cell | 5.82e-11 | 7 |
intestinal epithelial cell | 1.18e-08 | 9 |
epithelial cell of alimentary canal | 1.18e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.72e-17 | 2 |
brainstem | 2.72e-17 | 2 |
myelencephalon | 2.72e-17 | 2 |
future myelencephalon | 2.72e-17 | 2 |
corpora quadrigemina | 2.52e-09 | 1 |
midbrain tectum | 2.52e-09 | 1 |
neural tube mantle layer | 2.52e-09 | 1 |
tectal plate | 2.52e-09 | 1 |
neural tube alar plate | 2.52e-09 | 1 |
regional part of midbrain | 6.98e-09 | 4 |
midbrain | 6.98e-09 | 4 |
presumptive midbrain | 6.98e-09 | 4 |
midbrain neural tube | 6.98e-09 | 4 |
epithelium of mucosa | 1.18e-08 | 9 |
gastrointestinal system epithelium | 1.18e-08 | 9 |
intestinal epithelium | 1.18e-08 | 9 |
simple columnar epithelium | 3.54e-07 | 11 |
posterior neural tube | 8.89e-07 | 12 |
chordal neural plate | 8.89e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.